##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547395_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2416327 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.29892601456674 31.0 31.0 33.0 30.0 34.0 2 31.691434975481382 31.0 31.0 34.0 30.0 34.0 3 31.671375190526778 31.0 31.0 34.0 30.0 34.0 4 35.51943052409711 37.0 35.0 37.0 33.0 37.0 5 35.45579344186445 37.0 35.0 37.0 33.0 37.0 6 35.4976693965676 37.0 35.0 37.0 33.0 37.0 7 35.9372142098317 37.0 35.0 37.0 35.0 37.0 8 35.95217576097937 37.0 35.0 37.0 35.0 37.0 9 37.71774722543762 39.0 37.0 39.0 35.0 39.0 10 36.865502061600104 39.0 37.0 39.0 32.0 39.0 11 36.65282803196753 39.0 35.0 39.0 32.0 39.0 12 36.2480181697262 38.0 35.0 39.0 32.0 39.0 13 36.01900943042891 38.0 35.0 39.0 31.0 39.0 14 37.132505658381504 39.0 35.0 41.0 31.0 41.0 15 37.32312224297456 39.0 35.0 41.0 32.0 41.0 16 37.4385358438655 39.0 35.0 41.0 32.0 41.0 17 37.354196265654444 39.0 35.0 41.0 32.0 41.0 18 37.16281819472282 39.0 35.0 40.0 32.0 41.0 19 36.99511945196159 38.0 35.0 40.0 32.0 41.0 20 36.74899547950257 38.0 35.0 40.0 32.0 41.0 21 36.61353782000532 38.0 35.0 40.0 31.0 41.0 22 36.50472845769633 38.0 35.0 40.0 31.0 41.0 23 36.41182381358152 38.0 35.0 40.0 31.0 41.0 24 36.29064567833741 38.0 35.0 40.0 31.0 41.0 25 36.176511705576274 37.0 35.0 40.0 31.0 41.0 26 35.963242143964784 37.0 35.0 40.0 30.0 41.0 27 35.90919647878785 37.0 35.0 40.0 30.0 41.0 28 35.9057714456694 37.0 35.0 40.0 30.0 41.0 29 35.88917187119127 37.0 35.0 40.0 30.0 41.0 30 35.83250569976663 37.0 35.0 40.0 30.0 41.0 31 35.68770824478641 37.0 35.0 40.0 30.0 41.0 32 35.3883799667843 37.0 34.0 40.0 28.0 41.0 33 35.02423761353492 37.0 34.0 40.0 25.0 41.0 34 34.64302762001997 37.0 34.0 40.0 23.0 41.0 35 34.37138226738351 37.0 33.0 40.0 22.0 41.0 36 34.06417136422347 37.0 33.0 40.0 21.0 41.0 37 33.96646728691936 37.0 33.0 40.0 20.0 41.0 38 33.903464224833805 37.0 33.0 40.0 20.0 41.0 39 33.78308647794773 37.0 33.0 40.0 18.0 41.0 40 33.662787776654405 36.0 33.0 40.0 18.0 41.0 41 33.65364704363275 36.0 33.0 40.0 18.0 41.0 42 33.56417364040546 36.0 33.0 40.0 18.0 41.0 43 33.42789738309426 36.0 33.0 40.0 18.0 41.0 44 33.32571046882313 36.0 33.0 40.0 18.0 41.0 45 33.18342343565254 36.0 32.0 40.0 18.0 41.0 46 33.093833326366834 35.0 32.0 40.0 18.0 41.0 47 33.06549237748037 35.0 32.0 40.0 18.0 41.0 48 32.948216859721384 35.0 32.0 40.0 17.0 41.0 49 32.83876064787589 35.0 32.0 40.0 15.0 41.0 50 32.69641195086592 35.0 31.0 40.0 15.0 41.0 51 32.24848871862128 35.0 31.0 39.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 2.0 11 2.0 12 4.0 13 7.0 14 18.0 15 93.0 16 250.0 17 674.0 18 1503.0 19 2956.0 20 4922.0 21 8101.0 22 12468.0 23 18563.0 24 27771.0 25 41554.0 26 58138.0 27 64591.0 28 63568.0 29 63443.0 30 69279.0 31 80258.0 32 96366.0 33 121660.0 34 188328.0 35 266720.0 36 203730.0 37 225144.0 38 310593.0 39 485472.0 40 147.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.514766420273414 24.171314561315583 27.978622098747397 19.335296919663605 2 35.16411479075473 24.679399766670652 28.234506339580694 11.921979102993923 3 25.406246753854095 23.860346716317782 37.92094364711399 12.812462882714135 4 22.663737151469977 27.003381578735 37.24599360930868 13.086887660486349 5 21.017809261743135 30.802494861001843 35.6820496563586 12.497646220896428 6 19.344153336862107 39.15715877859247 32.25991349680734 9.238774387738083 7 84.1856669233924 2.7527317287767756 12.051762861566335 1.0098384862644831 8 85.00194717022985 2.1908872433242688 11.610100785200016 1.1970648012458578 9 80.83210591943887 4.130401224668681 13.257311613866833 1.7801812420256031 10 37.789090632186785 23.65097935834016 26.223478858614747 12.336451150858307 11 32.169155913086264 25.31193004920278 27.064466026328386 15.454448011382565 12 29.55812685948549 23.038520862449495 30.33695356630125 17.066398711763764 13 20.194824624316162 31.362808096751806 31.47790013520521 16.96446714372682 14 17.3986798972159 33.561765439859755 32.17958496511441 16.85996969780994 15 17.16137757844861 27.1430977678104 40.34718810823204 15.348336545508948 16 18.790916957845525 24.867909020592 40.09949812256371 16.24167589899877 17 18.609236249894987 25.343134435033004 32.17701908723446 23.870610227837542 18 19.990299326208746 26.82207333692832 35.59538920022 17.59223813664293 19 23.368981102309412 28.110185417784926 30.42986317663131 18.09097030327435 20 24.683207198363466 27.240601127248095 31.52396178166283 16.552229892725613 21 21.61483110522707 29.348304265109814 32.50685855018795 16.53000607947517 22 21.897243212528767 26.17911400236806 31.115200881337667 20.80844190376551 23 19.659632160713347 29.606464687933382 30.98976256111031 19.74414059024296 24 18.984971818797707 27.43577338663186 36.941316303629435 16.637938490941004 25 18.00447538764414 29.07135499458476 35.08804892715266 17.836120690618447 26 17.9507161075467 32.91321911314156 31.27498885705453 17.86107592225721 27 17.722435746486298 33.16893781346647 31.896883161923036 17.211743278124196 28 16.567625160005246 30.752253316707552 35.66259864662357 17.01752287666363 29 16.755472251893057 27.843044422381574 36.24240427723566 19.159079048489712 30 17.733816656437643 31.56282241600578 33.2110264877229 17.49233443983368 31 21.480163901657352 29.652567719518096 31.076505787503102 17.790762591321457 32 22.548727883270768 28.832355885606543 31.242667072792713 17.37624915832998 33 22.30021019506052 29.91089368285004 29.92748911881546 17.86140700327398 34 18.0717676043019 30.756309059162934 30.653715329092464 20.518208007442702 35 17.92526425438279 30.04725767663069 32.092841738721624 19.9346363302649 36 23.5167260060414 29.722218888420315 28.515842433577905 18.245212671960374 37 18.95571253394098 32.683448887505705 30.412398652996885 17.948439925556432 38 19.308148276288765 33.14733477712247 28.37045648209038 19.174060464498393 39 19.087193082724315 33.01010169567281 29.007456358348847 18.89524886325402 40 21.397931654118008 30.36244680459226 28.20388134552981 20.035740195759928 41 17.97103620495074 29.711996762027653 29.650746773925878 22.666220259095727 42 20.203060264608226 29.912300777171303 27.71673701448521 22.167901943735263 43 19.682683676505704 30.67842224996865 28.286858525356873 21.35203554816877 44 19.030826539619845 31.602800448780314 29.12238285629387 20.243990155305966 45 18.30786975438341 34.87615707642219 26.494427285710913 20.321545883483484 46 20.038637154656634 33.672346499459714 27.259224434441197 19.02979191144245 47 19.41103170224891 31.100923012489616 28.705096619786975 20.7829486654745 48 20.3184419989513 30.198147850021957 30.150803264624365 19.332606886402377 49 19.890064548382732 29.732565170194263 30.166943464191725 20.210426817231276 50 19.326730198354774 32.79514734553726 28.67480270675285 19.203319749355117 51 17.68436142955817 33.3704419972959 27.75874291848744 21.186453654658497 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1312.0 1 2013.0 2 2714.0 3 35172.5 4 67631.0 5 44777.5 6 21924.0 7 23178.0 8 24432.0 9 28097.5 10 31763.0 11 34861.0 12 37959.0 13 38266.0 14 38573.0 15 36461.0 16 34349.0 17 31567.0 18 28785.0 19 26419.0 20 24053.0 21 22708.5 22 21364.0 23 21368.5 24 21373.0 25 22338.0 26 25555.5 27 27808.0 28 32476.5 29 37145.0 30 41046.5 31 44948.0 32 50935.5 33 56923.0 34 65264.5 35 73606.0 36 80619.0 37 87632.0 38 95602.0 39 103572.0 40 122668.0 41 141764.0 42 156966.0 43 172168.0 44 180773.5 45 189379.0 46 188378.0 47 187377.0 48 183673.0 49 179969.0 50 171238.0 51 162507.0 52 151120.5 53 139734.0 54 125689.5 55 111645.0 56 99311.5 57 86978.0 58 78788.0 59 70598.0 60 62822.5 61 55047.0 62 47041.5 63 39036.0 64 32459.0 65 25882.0 66 21110.0 67 16338.0 68 13055.0 69 9772.0 70 7978.0 71 6184.0 72 5286.0 73 4388.0 74 3591.0 75 2366.5 76 1939.0 77 1477.0 78 1015.0 79 680.0 80 345.0 81 258.0 82 171.0 83 114.5 84 58.0 85 43.5 86 29.0 87 27.5 88 26.0 89 16.5 90 7.0 91 6.0 92 5.0 93 3.5 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2416327.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.44266291782751 #Duplication Level Percentage of deduplicated Percentage of total 1 79.43493367174219 20.210362413101223 2 7.209858645589791 3.6687600640985076 3 2.815179984481225 2.14877026194512 4 1.6610116539580813 1.690422384569544 5 1.0846372634147483 1.379803014058816 6 0.7623373941615441 1.1637536009584302 7 0.5454020759825292 0.9713536821734784 8 0.4075075713644027 0.8294462219749628 9 0.34143530370596986 0.7818321006393347 >10 3.9007324725391417 23.515694792384913 >50 1.3247724853990595 24.07734674993287 >100 0.5097203404929408 16.965576821951547 >500 0.001976909734719721 0.33695366672295307 >1k 3.294849557866202E-4 0.15093545887166984 >5k 0.0 0.0 >10k+ 1.647424778933101E-4 2.108988766616757 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 50316 2.0823340549519993 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.277025419158913E-5 0.0 0.0 0.0411368163332198 0.0 2 8.277025419158913E-5 0.0 0.0 0.12899744115759168 0.0 3 8.277025419158913E-5 0.0 0.0 0.1904957400219424 0.0 4 8.277025419158913E-5 0.0 0.0 0.28377781649586337 0.0 5 8.277025419158913E-5 0.0 0.0 0.4747701780429553 0.0 6 8.277025419158913E-5 0.0 0.0 0.7987329529488352 0.0 7 8.277025419158913E-5 0.0 0.0 0.9914634898339505 0.0 8 8.277025419158913E-5 0.0 0.0 1.3232894388880312 0.0 9 8.277025419158913E-5 0.0 0.0 1.4823738674442657 0.0 10 8.277025419158913E-5 0.0 0.0 1.7077986547350585 0.0 11 8.277025419158913E-5 0.0 0.0 1.9807335679318239 0.0 12 8.277025419158913E-5 0.0 0.0 2.1665941737190373 0.0 13 8.277025419158913E-5 0.0 0.0 2.2737816528971453 0.0 14 8.277025419158913E-5 0.0 0.0 2.327582318121678 0.0 15 8.277025419158913E-5 0.0 0.0 2.3846524083867786 0.0 16 8.277025419158913E-5 0.0 0.0 2.4958542448931786 0.0 17 8.277025419158913E-5 0.0 0.0 2.6306869889712776 0.0 18 8.277025419158913E-5 0.0 0.0 2.787909086808201 0.0 19 8.277025419158913E-5 0.0 0.0 2.886240148787809 0.0 20 8.277025419158913E-5 0.0 0.0 2.9854816835635245 0.0 21 8.277025419158913E-5 0.0 0.0 3.1276395951375786 0.0 22 8.277025419158913E-5 0.0 0.0 3.2784883834017498 0.0 23 8.277025419158913E-5 0.0 0.0 3.4650939214766874 0.0 24 8.277025419158913E-5 0.0 0.0 3.596160618989069 0.0 25 8.277025419158913E-5 0.0 0.0 3.72486836425699 0.0 26 8.277025419158913E-5 0.0 0.0 3.84414030054707 0.0 27 8.277025419158913E-5 0.0 0.0 3.965191797302269 0.0 28 8.277025419158913E-5 0.0 0.0 4.092492448248933 0.0 29 8.277025419158913E-5 0.0 0.0 4.229766914825683 0.0 30 8.277025419158913E-5 0.0 0.0 4.386202695247787 0.0 31 8.277025419158913E-5 0.0 0.0 4.541521077238304 0.0 32 8.277025419158913E-5 0.0 0.0 4.684589461608466 0.0 33 8.277025419158913E-5 0.0 0.0 4.8295201766979385 0.0 34 8.277025419158913E-5 0.0 0.0 4.978713559878278 0.0 35 8.277025419158913E-5 0.0 0.0 5.150958458850975 0.0 36 8.277025419158913E-5 0.0 0.0 5.306649306985355 0.0 37 8.277025419158913E-5 0.0 0.0 5.472603666639491 0.0 38 8.277025419158913E-5 0.0 0.0 5.6371923170994656 0.0 39 8.277025419158913E-5 0.0 0.0 5.828101908392366 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCGATC 25 3.8920873E-5 45.0 38 GCCGATC 50 2.1827873E-11 45.0 9 TCGCGAT 25 3.8920873E-5 45.0 37 CGTTTTT 23840 0.0 43.980705 1 GGCGATA 780 0.0 39.519234 8 AGGGCGA 2085 0.0 39.496403 6 ACGGGTA 345 0.0 39.130436 5 GTTTTTT 27225 0.0 38.900826 2 GGGCGAT 4085 0.0 38.88617 7 GCGATAT 215 0.0 38.720932 9 AACGGGT 535 0.0 38.69159 4 TAGCGCG 35 6.251148E-6 38.57143 1 GTTCGCA 35 6.251148E-6 38.57143 10 TAGGGCG 950 0.0 38.36842 5 TAATCGT 270 0.0 38.333332 21 CGTTAGG 505 0.0 38.316833 2 GACCGAT 1270 0.0 38.267715 9 TCGTTAG 100 0.0 38.25 1 GCGATAC 100 0.0 38.25 9 TCGTCCC 860 0.0 38.197674 38 >>END_MODULE