##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547394_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1580476 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.426172241780325 31.0 31.0 33.0 30.0 34.0 2 31.828096725290354 31.0 31.0 34.0 30.0 34.0 3 31.87784313080363 31.0 31.0 34.0 30.0 34.0 4 35.6402374980702 37.0 35.0 37.0 33.0 37.0 5 35.56015909131173 37.0 35.0 37.0 33.0 37.0 6 35.59723146697577 37.0 35.0 37.0 33.0 37.0 7 35.97579653218398 37.0 35.0 37.0 35.0 37.0 8 35.98195037444415 37.0 35.0 37.0 35.0 37.0 9 37.75191840939059 39.0 38.0 39.0 35.0 39.0 10 37.12760143146748 39.0 37.0 39.0 33.0 39.0 11 36.75544013322568 39.0 35.0 39.0 32.0 39.0 12 35.81036409284292 37.0 35.0 39.0 31.0 39.0 13 35.247179963504664 37.0 35.0 39.0 30.0 39.0 14 36.29075544329683 38.0 35.0 41.0 31.0 41.0 15 36.68127640027435 38.0 35.0 41.0 31.0 41.0 16 36.91219670529638 38.0 35.0 41.0 32.0 41.0 17 36.86300772678611 38.0 35.0 41.0 32.0 41.0 18 36.7537646886128 38.0 35.0 40.0 32.0 41.0 19 36.63787555141616 37.0 35.0 40.0 32.0 41.0 20 36.40759176349403 37.0 35.0 40.0 31.0 41.0 21 36.21968508221574 37.0 35.0 40.0 31.0 41.0 22 36.085729236002315 37.0 35.0 40.0 31.0 41.0 23 36.07290018956314 36.0 35.0 40.0 31.0 41.0 24 35.962516988552814 36.0 35.0 40.0 31.0 41.0 25 35.85020841822337 36.0 34.0 40.0 31.0 41.0 26 35.63246072702148 36.0 34.0 40.0 30.0 41.0 27 35.58670362599622 36.0 34.0 40.0 30.0 41.0 28 35.66578739569598 36.0 34.0 40.0 30.0 41.0 29 35.753026936188846 36.0 35.0 40.0 30.0 41.0 30 35.781780299099765 36.0 35.0 40.0 30.0 41.0 31 35.59852917728583 36.0 34.0 40.0 30.0 41.0 32 35.33687888965097 36.0 34.0 40.0 29.0 41.0 33 35.07400808364063 36.0 34.0 40.0 28.0 41.0 34 34.86400805833179 36.0 34.0 40.0 27.0 41.0 35 34.69518929740154 36.0 34.0 40.0 26.0 41.0 36 34.3883526228807 35.0 33.0 40.0 24.0 41.0 37 34.300865055843936 35.0 33.0 40.0 23.0 41.0 38 34.27022049053576 35.0 33.0 40.0 24.0 41.0 39 34.206024640677875 35.0 33.0 40.0 23.0 41.0 40 34.027334170212015 35.0 33.0 40.0 23.0 41.0 41 34.04179500353058 35.0 33.0 40.0 23.0 41.0 42 33.959599513058095 35.0 33.0 40.0 23.0 41.0 43 33.838380336050655 35.0 33.0 40.0 23.0 41.0 44 33.74406950817349 35.0 33.0 40.0 23.0 41.0 45 33.59226713977308 35.0 33.0 40.0 23.0 41.0 46 33.53452061277741 35.0 33.0 40.0 23.0 41.0 47 33.52261280778702 35.0 33.0 39.0 23.0 41.0 48 33.47340168404961 35.0 33.0 39.0 23.0 41.0 49 33.375153434788004 35.0 33.0 39.0 22.0 41.0 50 33.204699090653705 35.0 33.0 39.0 22.0 41.0 51 32.68563331553279 35.0 32.0 38.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 1.0 12 1.0 13 3.0 14 19.0 15 67.0 16 130.0 17 395.0 18 858.0 19 1662.0 20 2851.0 21 4650.0 22 6888.0 23 10346.0 24 14798.0 25 21387.0 26 29830.0 27 35701.0 28 37678.0 29 40235.0 30 45708.0 31 54501.0 32 67253.0 33 89106.0 34 157441.0 35 244061.0 36 107130.0 37 127612.0 38 182493.0 39 297558.0 40 111.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.686704511805303 23.965058627907034 29.121036953424156 16.2271999068635 2 31.740880595466177 26.239942903277242 28.484962758055165 13.534213743201414 3 27.944366127672932 25.564956380229752 33.03466803671805 13.456009455379265 4 24.599551021337877 27.749867761357972 33.12628600497571 14.52429521232844 5 22.757827388710744 32.04591528121908 31.63262207081917 13.563635259251011 6 21.87923132018455 39.963593246591536 28.322922967511055 9.834252465712861 7 87.1184377364794 3.5587380004504974 8.17968763840767 1.1431366246624435 8 88.22835652044067 2.4932362149124696 7.726722835398955 1.5516844292478975 9 83.58709654559765 5.095933123944938 9.090362650239548 2.2266076802178585 10 50.58950594630984 27.264760742966043 13.525608740657876 8.620124570066233 11 46.38450694600867 19.524307866743943 22.12466370890795 11.966521478339438 12 43.32479582100582 19.014398193961817 23.98277480961432 13.678031175418038 13 21.366854036378914 39.3152442681825 24.414480194574292 14.903421500864297 14 15.52038752882043 40.73620858526166 27.23135308603231 16.512050799885607 15 13.933523824468072 23.826429506047546 48.212247449502556 14.02779921998183 16 15.991258329769007 18.564976627294563 48.50684224246366 16.93692280047277 17 16.482186379293324 19.387766723442812 29.614242797739415 34.51580409952445 18 20.059336554303894 23.65230474869596 35.48842247525429 20.799936221745856 19 28.425866637645875 24.15595048580301 27.49273003829226 19.925452838258852 20 32.4339629326861 21.84493785416545 27.30379961479959 18.41729959834885 21 23.128791579245746 27.930762631004836 29.10990106777958 19.830544721969837 22 23.082792778884336 24.67857784616786 26.594076721190323 25.644552653757476 23 20.889213123135058 30.098274190813402 25.259099157469016 23.753413528582527 24 20.640996763000512 22.748273305004314 39.44950761669269 17.161222315302478 25 17.767748450466822 24.410367509535103 36.500016450740155 21.32186758925792 26 17.437151845393416 35.40616877447047 27.73866860363587 19.418010776500243 27 18.368706642808874 35.36124559942701 28.325517122689618 17.944530635074496 28 15.68900761542725 30.301314287594373 37.97014317205702 16.03953492492135 29 15.799417390710142 25.229804185574473 37.725343504108885 21.2454349196065 30 18.250894034455442 31.20667444491406 31.36668952897735 19.175741991653148 31 27.63041007898886 27.833386903692304 26.290623837375577 18.24557917994326 32 29.561916789625403 26.86728555194764 27.18908733824493 16.381710320182023 33 27.985366433909785 28.483380956117017 25.25859298084881 18.27265962912439 34 20.439158835692538 27.691847266266617 27.58289274876683 24.286101149274018 35 20.26921003545767 25.33584818750807 31.44558980965228 22.94935196738198 36 30.051263037211573 25.015944563536557 25.926935935756063 19.005856463495807 37 20.992473153657507 32.553040982590055 28.941597341560392 17.51288852219205 38 20.5869624087933 31.8734988699607 25.657523429650308 21.882015291595696 39 21.118321315856743 31.853378349307427 27.440340758100724 19.58795957673511 40 25.357487238021964 26.403564495759507 26.75725540912991 21.481692857088625 41 16.696299089641347 25.359638488657847 29.350904411076158 28.59315801062465 42 21.741614551565476 26.46449550641705 24.74811385936895 27.04577608264852 43 22.652099747164776 26.33523065203141 26.436339431917975 24.57633016888583 44 19.358408479470743 30.156927406680012 29.13438736178215 21.3502767520671 45 18.023430915749433 36.349555450383306 23.403708756096265 22.223304877771 46 21.47403693570798 33.21796724531091 25.757430040063877 19.550565778917235 47 21.168242985024765 28.04237457576072 27.122588384765095 23.66679405444942 48 23.69109053221941 23.813205641844608 31.11081724746216 21.38488657847383 49 20.52236161763924 25.03695089327519 32.01307707298307 22.427610416102493 50 19.730005390781006 32.59106750118318 27.22945492370653 20.449472184329277 51 18.63641080282143 34.00931111892873 23.86331712724521 23.490960951004634 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 863.0 1 1548.0 2 2233.0 3 12851.5 4 23470.0 5 16335.0 6 9200.0 7 9513.5 8 9827.0 9 10733.0 10 11639.0 11 11997.0 12 12355.0 13 11920.5 14 11486.0 15 10879.5 16 10273.0 17 9823.5 18 9374.0 19 9531.5 20 9689.0 21 9126.0 22 8563.0 23 8266.5 24 7970.0 25 8880.5 26 10795.5 27 11800.0 28 14911.0 29 18022.0 30 19902.5 31 21783.0 32 24980.0 33 28177.0 34 33745.0 35 39313.0 36 41413.0 37 43513.0 38 51815.0 39 60117.0 40 82031.5 41 103946.0 42 125447.0 43 146948.0 44 150345.0 45 153742.0 46 144774.5 47 135807.0 48 127783.5 49 119760.0 50 109855.0 51 99950.0 52 92651.5 53 85353.0 54 80549.5 55 75746.0 56 71280.0 57 66814.0 58 62683.5 59 58553.0 60 57483.5 61 56414.0 62 48422.0 63 40430.0 64 33726.5 65 27023.0 66 21314.5 67 15606.0 68 13874.5 69 12143.0 70 10538.5 71 8934.0 72 7327.0 73 5720.0 74 4634.5 75 2978.5 76 2408.0 77 1813.0 78 1218.0 79 882.5 80 547.0 81 398.5 82 250.0 83 170.5 84 91.0 85 63.0 86 35.0 87 23.5 88 12.0 89 9.0 90 6.0 91 6.0 92 6.0 93 4.5 94 3.0 95 1.5 96 0.0 97 2.0 98 4.0 99 2.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1580476.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.3090966006786 #Duplication Level Percentage of deduplicated Percentage of total 1 83.7578480763802 15.335305314954073 2 6.646630433456941 2.433875973503468 3 1.8994427711700992 1.0433124355444199 4 0.8878865108594102 0.6502559959105764 5 0.478850784580543 0.438366263609795 6 0.3337803383773334 0.3666729875254673 7 0.25152085963365833 0.32235838012828605 8 0.18995859029302056 0.27823761438429134 9 0.1596843809242462 0.2631309080365425 >10 2.3176285067477767 11.242799114904061 >50 1.4720732063669502 19.925413723667166 >100 1.599126098984474 45.819280322797425 >500 0.003828991530002005 0.45224340610843883 >1k 0.0013923605563643654 0.43720261639006347 >5k 0.0 0.0 >10k+ 3.4809013909109136E-4 0.9915449425359485 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15558 0.9843869821496815 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3537 0.22379333820950145 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.327207752601115E-5 0.0 0.0 0.022398315444207947 0.0 2 6.327207752601115E-5 0.0 0.0 0.1061705460886467 0.0 3 6.327207752601115E-5 0.0 0.0 0.1650768502653631 0.0 4 6.327207752601115E-5 0.0 0.0 0.34603499198975496 0.0 5 6.327207752601115E-5 0.0 0.0 0.5594517094849906 0.0 6 6.327207752601115E-5 0.0 0.0 0.8353812395759252 0.0 7 6.327207752601115E-5 0.0 0.0 0.9479422654946991 0.0 8 6.327207752601115E-5 0.0 0.0 1.1918561243574721 0.0 9 6.327207752601115E-5 0.0 0.0 1.2637332044270206 0.0 10 6.327207752601115E-5 0.0 0.0 1.3999579873405228 0.0 11 6.327207752601115E-5 0.0 0.0 1.634381034574394 0.0 12 1.265441550520223E-4 0.0 0.0 1.8062279971350403 0.0 13 1.265441550520223E-4 0.0 0.0 1.8788643421349012 0.0 14 1.265441550520223E-4 0.0 0.0 1.9084756744170743 0.0 15 1.265441550520223E-4 0.0 0.0 1.9506148780493977 0.0 16 1.265441550520223E-4 0.0 0.0 2.053938180649374 0.0 17 1.265441550520223E-4 0.0 0.0 2.156249130008934 0.0 18 1.265441550520223E-4 0.0 0.0 2.293106633697696 0.0 19 1.265441550520223E-4 0.0 0.0 2.3581503293944355 0.0 20 1.265441550520223E-4 0.0 0.0 2.429078328301094 0.0 21 1.265441550520223E-4 0.0 0.0 2.536261227630157 0.0 22 1.265441550520223E-4 0.0 0.0 2.6460382821377864 0.0 23 1.265441550520223E-4 0.0 0.0 2.7662552294372076 0.0 24 1.265441550520223E-4 0.0 0.0 2.8506601808569063 0.0 25 1.265441550520223E-4 0.0 0.0 2.917791855112004 0.0 26 1.265441550520223E-4 0.0 0.0 2.9853031618322583 0.0 27 1.265441550520223E-4 0.0 0.0 3.0473730698852752 0.0 28 1.265441550520223E-4 0.0 0.0 3.1179214363267773 0.0 29 1.265441550520223E-4 0.0 0.0 3.18941888393117 0.0 30 1.265441550520223E-4 0.0 0.0 3.285782258003285 0.0 31 1.265441550520223E-4 0.0 0.0 3.386321589192117 0.0 32 1.265441550520223E-4 0.0 0.0 3.471549077619654 0.0 33 1.265441550520223E-4 0.0 0.0 3.552284248542844 0.0 34 1.265441550520223E-4 0.0 0.0 3.6526970355766237 0.0 35 1.265441550520223E-4 0.0 0.0 3.7829109711251547 0.0 36 1.265441550520223E-4 0.0 0.0 3.887879347740807 0.0 37 1.265441550520223E-4 0.0 0.0 3.989684120480159 0.0 38 1.265441550520223E-4 0.0 0.0 4.091172532831881 0.0 39 1.265441550520223E-4 0.0 0.0 4.19126895947803 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTGATCG 20 7.0340896E-4 45.000004 20 GGTACGC 20 7.0340896E-4 45.000004 8 CGAACGC 20 7.0340896E-4 45.000004 33 CTCGTTA 20 7.0340896E-4 45.000004 34 GCACGAT 25 3.8914717E-5 45.000004 15 TTCGTTA 25 3.8914717E-5 45.000004 13 ACCTATC 30 2.1660198E-6 45.000004 30 CCCGTAG 25 3.8914717E-5 45.000004 1 CCGTAGT 25 3.8914717E-5 45.000004 17 TACGCCG 20 7.0340896E-4 45.000004 1 CGTAGTC 25 3.8914717E-5 45.000004 18 CGTAGGT 25 3.8914717E-5 45.000004 21 TATTACG 30 2.1660198E-6 45.000004 1 ACGTCGA 30 2.1660198E-6 45.000004 35 ACGTCCA 20 7.0340896E-4 45.000004 11 ATGCGTC 55 1.8189894E-12 45.000004 12 AACCTCG 25 3.8914717E-5 45.000004 35 GTATAAC 25 3.8914717E-5 45.000004 39 CGACTTA 20 7.0340896E-4 45.000004 34 CTTACGA 25 3.8914717E-5 45.000004 34 >>END_MODULE