##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547393_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 4969078 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.336557204374735 31.0 31.0 33.0 30.0 34.0 2 31.75047886147088 31.0 31.0 34.0 30.0 34.0 3 31.82435594691812 31.0 31.0 34.0 30.0 34.0 4 35.617810587799184 37.0 35.0 37.0 33.0 37.0 5 35.52751959216579 37.0 35.0 37.0 33.0 37.0 6 35.562871422022354 37.0 35.0 37.0 33.0 37.0 7 35.961888905748715 37.0 35.0 37.0 35.0 37.0 8 35.96904174174767 37.0 35.0 37.0 35.0 37.0 9 37.72300696426983 39.0 37.0 39.0 35.0 39.0 10 36.98421135671447 39.0 37.0 39.0 32.0 39.0 11 36.70129126570362 39.0 35.0 39.0 32.0 39.0 12 36.41923632512913 39.0 35.0 39.0 32.0 39.0 13 36.29051264641046 39.0 35.0 39.0 32.0 39.0 14 37.36396812446897 39.0 36.0 41.0 32.0 41.0 15 37.503490385942825 39.0 36.0 41.0 32.0 41.0 16 37.57149817330298 39.0 36.0 41.0 32.0 41.0 17 37.479723803892796 39.0 36.0 41.0 32.0 41.0 18 37.330593925070204 39.0 36.0 41.0 32.0 41.0 19 37.26501395228652 39.0 36.0 41.0 32.0 41.0 20 37.12045252660554 39.0 35.0 41.0 32.0 41.0 21 37.00333764130891 39.0 35.0 41.0 31.0 41.0 22 36.91443000089755 39.0 35.0 41.0 31.0 41.0 23 36.826852788384485 38.0 35.0 41.0 31.0 41.0 24 36.719397441537446 38.0 35.0 40.0 31.0 41.0 25 36.62914327366163 38.0 35.0 40.0 31.0 41.0 26 36.42130210071164 38.0 35.0 40.0 30.0 41.0 27 36.43669026728902 38.0 35.0 40.0 30.0 41.0 28 36.48837792443588 38.0 35.0 40.0 30.0 41.0 29 36.49594190310557 38.0 35.0 40.0 30.0 41.0 30 36.4752573817517 38.0 35.0 40.0 30.0 41.0 31 36.403508658950415 38.0 35.0 40.0 30.0 41.0 32 36.24145243846041 38.0 35.0 40.0 30.0 41.0 33 36.039965361783416 38.0 35.0 40.0 30.0 41.0 34 35.80930627371919 38.0 35.0 40.0 28.0 41.0 35 35.6541420762564 38.0 35.0 40.0 27.0 41.0 36 35.437873585401555 38.0 34.0 40.0 26.0 41.0 37 35.40756273095331 38.0 34.0 40.0 26.0 41.0 38 35.33675905268543 38.0 34.0 40.0 26.0 41.0 39 35.20579713178179 38.0 34.0 40.0 25.0 41.0 40 35.09974405714702 38.0 34.0 40.0 25.0 41.0 41 35.073748892651714 38.0 34.0 40.0 25.0 41.0 42 35.003520975118526 38.0 34.0 40.0 24.0 41.0 43 34.89848780799979 38.0 34.0 40.0 24.0 41.0 44 34.814685541261376 38.0 34.0 40.0 24.0 41.0 45 34.660583110186636 38.0 33.0 40.0 23.0 41.0 46 34.590554022295485 37.0 33.0 40.0 23.0 41.0 47 34.55317344585857 37.0 33.0 40.0 23.0 41.0 48 34.436788072153426 37.0 33.0 40.0 23.0 41.0 49 34.32499228227047 37.0 33.0 40.0 24.0 41.0 50 34.21389400609127 37.0 33.0 40.0 23.0 41.0 51 33.75210793632139 36.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 4.0 12 6.0 13 16.0 14 55.0 15 151.0 16 369.0 17 865.0 18 2121.0 19 3936.0 20 7002.0 21 11134.0 22 17123.0 23 25315.0 24 36865.0 25 54150.0 26 77046.0 27 93552.0 28 102695.0 29 112117.0 30 129796.0 31 155214.0 32 190557.0 33 239943.0 34 357993.0 35 461033.0 36 403789.0 37 511580.0 38 753783.0 39 1220529.0 40 339.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.251909911657656 24.786831681853254 29.013269664915704 15.947988741573385 2 30.901145041393995 25.993152049535144 30.16531437019101 12.94038853887985 3 27.659054657624615 25.58124464940981 33.65622354891592 13.103477144049661 4 24.208313896461277 28.563125795167633 33.01236164938445 14.216198658986636 5 22.54365900474897 32.17860536703187 31.644502259775354 13.633233368443804 6 21.544701049168477 40.684328159066936 27.776460743824106 9.994510047940484 7 89.68510858553638 2.256696312676114 7.078959114749256 0.9792359870382393 8 90.54104202027015 1.5919049771406284 6.880250219457211 0.9868027831320016 9 85.52751637225255 4.40622988812009 8.25915793634151 1.8070958032858409 10 37.596793610404184 35.914127329053805 16.152473356224235 10.336605704317783 11 27.879377220482347 24.20950123946535 30.132692624265506 17.778428915786794 12 27.924214512229433 22.811092923073456 30.549027405084 18.715665159613113 13 23.36894289041146 26.121304596144395 31.516490584369976 18.993261929074166 14 19.612089003231585 28.48965140011889 31.91767164854325 19.98058794810627 15 19.245361010634166 25.811166578588622 36.77738606638898 18.166086344388237 16 23.228494300149848 24.440771507309808 34.671140199449475 17.659593993090873 17 22.633897073058623 24.257578568901515 30.95924435076286 22.149280007277003 18 22.650781493065715 24.916372816043538 33.135301961450395 19.29754372944035 19 25.141404502002185 25.797481947355223 29.75708974582407 19.30402380481852 20 26.270728694538505 26.487227610433965 29.54753376783379 17.694509927193735 21 25.030297371061593 25.26557240598759 31.841540825078617 17.8625893978722 22 24.727444407191836 23.026927731864948 31.477811376677927 20.76781648426529 23 22.07204233863908 26.25122809503091 31.334162997642622 20.34256656868739 24 21.4098470581464 25.203649449656456 34.27092510924562 19.115578382951526 25 21.550879257681206 26.82511725515277 31.67720450353164 19.94679898363439 26 20.52767133057682 29.070000511161226 30.051953299988448 20.350374858273508 27 19.751974108677707 28.48598874881819 31.742226626347986 20.019810516156117 28 18.981207378914156 27.669539500084323 33.510361479534026 19.83889164146749 29 20.05138579028142 25.87427687792383 33.489613163649274 20.58472416814548 30 21.27700551289394 26.88484664559502 32.102333672363365 19.735814169147677 31 23.37113645630034 26.771425202019365 30.430896838407445 19.42654150327284 32 24.114010687696993 26.68380331321022 29.97137497137296 19.23081102771983 33 23.51858835784023 26.759390776317055 30.046821563275923 19.675199302566796 34 20.79108035736207 27.216578206258784 31.168659457549268 20.823681978829875 35 21.00981308806181 27.527561451037798 31.31256945453462 20.15005600636577 36 23.571173565800336 27.670304229476777 29.289699215830385 19.468822988892505 37 21.74151824543708 29.231257790680687 29.589875626826544 19.43734833705569 38 21.834593862281896 28.997129849843372 28.912144264992417 20.256132022882316 39 21.626386222957255 28.755716855320042 29.083101533121436 20.534795388601264 40 23.055504461793515 27.158036158820607 28.765919955372006 21.02053942401387 41 20.00206074446809 26.91356424672746 29.872060772642328 23.212314236162122 42 21.135872691070656 27.176369539781824 28.7916993856808 22.89605838346671 43 21.433312175820145 27.360729696736495 28.829613863980402 22.37634426346296 44 20.935694710366793 27.958104098989793 29.571844112730773 21.534357077912645 45 20.43745338672486 28.887008817329896 28.573811882204303 22.10172591374094 46 21.387347914442074 28.9974920900819 28.878938909793728 20.736221085682295 47 20.959260450329015 27.679259613151576 29.927765271545343 21.433714664974065 48 21.182621806298872 27.190054171015227 30.967777120826035 20.659546901859862 49 21.691508968062085 26.398197009586085 30.42578522615262 21.484508796199215 50 20.694261591385764 28.315252849723834 30.093671300792625 20.89681425809778 51 20.230191596911943 28.67529952236612 29.288833864149446 21.80567501657249 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1922.0 1 3665.0 2 5408.0 3 43307.5 4 81207.0 5 54867.5 6 28528.0 7 27838.0 8 27148.0 9 27879.5 10 28611.0 11 28763.0 12 28915.0 13 28664.5 14 28414.0 15 27373.0 16 26332.0 17 25634.0 18 24936.0 19 24192.5 20 23449.0 21 25472.0 22 27495.0 23 29635.0 24 31775.0 25 37966.5 26 53563.0 27 62968.0 28 72990.5 29 83013.0 30 98212.0 31 113411.0 32 129453.0 33 145495.0 34 165597.5 35 185700.0 36 194714.0 37 203728.0 38 225096.5 39 246465.0 40 268168.5 41 289872.0 42 311341.5 43 332811.0 44 345101.5 45 357392.0 46 357987.0 47 358582.0 48 358627.0 49 358672.0 50 344992.0 51 331312.0 52 315086.5 53 298861.0 54 274642.5 55 250424.0 56 238740.5 57 227057.0 58 211206.5 59 195356.0 60 176792.5 61 158229.0 62 140732.0 63 123235.0 64 105616.5 65 87998.0 66 72199.5 67 56401.0 68 46047.5 69 35694.0 70 29795.0 71 23896.0 72 19131.0 73 14366.0 74 12261.0 75 7686.0 76 5216.0 77 3800.5 78 2385.0 79 1746.0 80 1107.0 81 792.5 82 478.0 83 329.0 84 180.0 85 179.0 86 178.0 87 137.0 88 96.0 89 58.5 90 21.0 91 17.5 92 14.0 93 9.0 94 4.0 95 3.5 96 3.0 97 3.5 98 4.0 99 2.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 4969078.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.046512610490137 #Duplication Level Percentage of deduplicated Percentage of total 1 80.71738356775042 15.373846640089276 2 6.491308117870835 2.472735638512077 3 2.1029218070261804 1.2015998014919658 4 1.1324423442850688 0.8627630956431431 5 0.7229998806970486 0.6885313172539601 6 0.5211726080443874 0.5955912390815675 7 0.4063170594394819 0.5417246097529953 8 0.3342616395152088 0.5093214825783626 9 0.27299732486341877 0.46796822915770603 >10 4.224381040261676 20.582253419315748 >50 1.9945036394830247 27.439542875270767 >100 1.077173431901198 27.88215073420739 >500 0.001710031089699006 0.2343827887583915 >1k 3.2063082930999185E-4 0.11564431326305698 >5k 0.0 0.0 >10k+ 1.0687694310333062E-4 1.031943815623554 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 50694 1.020189258449958 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.0124457696176233E-5 0.0 0.0 0.023364495385260607 0.0 2 2.0124457696176233E-5 0.0 0.0 0.06810116484386038 0.0 3 2.0124457696176233E-5 0.0 0.0 0.10235299184275232 0.0 4 2.0124457696176233E-5 0.0 0.0 0.17152075294451002 0.0 5 2.0124457696176233E-5 0.0 0.0 0.3040201824161343 0.0 6 2.0124457696176233E-5 0.0 0.0 0.5263551910434894 0.0 7 2.0124457696176233E-5 0.0 0.0 0.6431977924274885 0.0 8 2.0124457696176233E-5 0.0 0.0 0.8501778398326612 0.0 9 2.0124457696176233E-5 0.0 0.0 0.9526113295061981 0.0 10 2.0124457696176233E-5 0.0 0.0 1.1112926784405477 0.0 11 2.0124457696176233E-5 0.0 0.0 1.2952100973259024 0.0 12 2.0124457696176233E-5 0.0 0.0 1.436544163726148 0.0 13 2.0124457696176233E-5 0.0 0.0 1.5122724980368591 0.0 14 2.0124457696176233E-5 0.0 0.0 1.5599674627767968 0.0 15 2.0124457696176233E-5 0.0 0.0 1.6045028876584349 0.0 16 2.0124457696176233E-5 0.0 0.0 1.6866710484319223 0.0 17 2.0124457696176233E-5 0.0 0.0 1.7880781907629544 0.0 18 4.0248915392352466E-5 0.0 0.0 1.9069936112896597 0.0 19 4.0248915392352466E-5 0.0 0.0 1.9871694507512259 0.0 20 4.0248915392352466E-5 0.0 0.0 2.0708469458519265 0.0 21 4.0248915392352466E-5 0.0 0.0 2.1773858248954836 2.0124457696176233E-5 22 4.0248915392352466E-5 0.0 0.0 2.3047736421122793 2.0124457696176233E-5 23 4.0248915392352466E-5 0.0 0.0 2.4382189210956238 2.0124457696176233E-5 24 4.0248915392352466E-5 0.0 0.0 2.5461061388048245 2.0124457696176233E-5 25 4.0248915392352466E-5 0.0 0.0 2.646647929454921 2.0124457696176233E-5 26 4.0248915392352466E-5 0.0 0.0 2.7436075666350983 2.0124457696176233E-5 27 4.0248915392352466E-5 0.0 0.0 2.8441292328274983 2.0124457696176233E-5 28 4.0248915392352466E-5 0.0 0.0 2.947428074181971 2.0124457696176233E-5 29 4.0248915392352466E-5 0.0 0.0 3.066504490370246 2.0124457696176233E-5 30 4.0248915392352466E-5 0.0 0.0 3.2077379344820107 2.0124457696176233E-5 31 4.0248915392352466E-5 0.0 0.0 3.3309801134133936 2.0124457696176233E-5 32 4.0248915392352466E-5 0.0 0.0 3.4541619189716886 2.0124457696176233E-5 33 4.0248915392352466E-5 0.0 0.0 3.5746671716563916 2.0124457696176233E-5 34 4.0248915392352466E-5 0.0 0.0 3.6998211740689118 2.0124457696176233E-5 35 4.0248915392352466E-5 0.0 0.0 3.84214133889627 2.0124457696176233E-5 36 4.0248915392352466E-5 0.0 0.0 3.9761903516105 2.0124457696176233E-5 37 4.0248915392352466E-5 0.0 0.0 4.11529060320647 2.0124457696176233E-5 38 4.0248915392352466E-5 0.0 0.0 4.271617390590367 2.0124457696176233E-5 39 4.0248915392352466E-5 0.0 0.0 4.50349139216571 2.0124457696176233E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 26085 0.0 42.429558 1 TAGGGAC 5670 0.0 39.642857 5 TACGGGA 1960 0.0 39.60459 4 TAGGGAT 8810 0.0 38.742905 5 TACGGGT 595 0.0 38.571426 4 AGGGCGA 4755 0.0 38.51735 6 ACGGGAT 2405 0.0 38.076923 5 AAGGGAT 9575 0.0 37.926895 5 ATAGGGA 7745 0.0 37.853455 4 TCGTAAG 245 0.0 37.65306 1 GGGCGAT 9175 0.0 37.56948 7 TCGATAG 240 0.0 37.500004 1 CGCGTAA 30 1.1404679E-4 37.500004 31 TAAGGGA 7075 0.0 37.494698 4 AGGGATT 10760 0.0 37.304836 6 GGCGATA 2070 0.0 37.282608 8 GTAGGGA 7020 0.0 37.083332 4 ACGGGTA 510 0.0 37.058823 5 AGGGATC 6780 0.0 36.96903 6 GCGATAA 615 0.0 36.951218 9 >>END_MODULE