##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547392_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1780939 Sequences flagged as poor quality 0 Sequence length 51 %GC 38 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.378272922317947 31.0 31.0 33.0 30.0 34.0 2 31.76268530252861 31.0 31.0 34.0 30.0 34.0 3 31.629657725503233 31.0 31.0 34.0 30.0 34.0 4 35.53326363227488 37.0 35.0 37.0 33.0 37.0 5 35.516239466932895 37.0 35.0 37.0 33.0 37.0 6 35.573884338542754 37.0 35.0 37.0 33.0 37.0 7 36.00163902300977 37.0 35.0 37.0 35.0 37.0 8 36.026842581357364 37.0 35.0 37.0 35.0 37.0 9 37.804651366498234 39.0 38.0 39.0 35.0 39.0 10 36.971234837352654 39.0 37.0 39.0 32.0 39.0 11 36.8341234595907 39.0 37.0 39.0 32.0 39.0 12 36.61111020646973 39.0 35.0 39.0 32.0 39.0 13 36.47748631480359 39.0 35.0 39.0 32.0 39.0 14 37.64086641934395 40.0 36.0 41.0 32.0 41.0 15 37.756895098596864 40.0 36.0 41.0 32.0 41.0 16 37.834972449926696 40.0 36.0 41.0 33.0 41.0 17 37.76469098604725 40.0 36.0 41.0 33.0 41.0 18 37.47037770524425 39.0 36.0 40.0 32.0 41.0 19 37.21215100573349 38.0 36.0 40.0 32.0 41.0 20 36.866479424618134 38.0 35.0 40.0 32.0 41.0 21 36.75013518149695 38.0 35.0 40.0 32.0 41.0 22 36.67138290531006 38.0 35.0 40.0 32.0 41.0 23 36.57108469183953 38.0 35.0 40.0 31.0 41.0 24 36.43318103539762 38.0 35.0 40.0 31.0 41.0 25 36.31982061148641 38.0 35.0 40.0 31.0 41.0 26 36.12802066774887 37.0 35.0 40.0 31.0 41.0 27 36.05923279797904 37.0 35.0 40.0 31.0 41.0 28 36.01781195200959 37.0 35.0 40.0 30.0 41.0 29 35.97358415981682 37.0 35.0 40.0 30.0 41.0 30 35.88633411924833 37.0 35.0 40.0 30.0 41.0 31 35.68780851000511 37.0 35.0 40.0 30.0 41.0 32 35.29672043792628 37.0 34.0 40.0 27.0 41.0 33 34.77902836649655 37.0 34.0 40.0 24.0 41.0 34 34.19485900415455 37.0 33.0 40.0 21.0 41.0 35 33.77923612206819 37.0 33.0 40.0 18.0 41.0 36 33.42142824655982 37.0 33.0 40.0 15.0 41.0 37 33.32640983211665 37.0 33.0 40.0 15.0 41.0 38 33.226230095472104 37.0 33.0 40.0 15.0 41.0 39 33.09873050115697 36.0 33.0 40.0 15.0 41.0 40 32.9989898587206 36.0 32.0 40.0 14.0 41.0 41 32.94808412865348 36.0 32.0 40.0 12.0 41.0 42 32.854868695671215 36.0 32.0 40.0 12.0 41.0 43 32.73314189873994 36.0 32.0 40.0 10.0 41.0 44 32.63142308636062 36.0 32.0 40.0 10.0 41.0 45 32.50926730224898 36.0 31.0 40.0 10.0 41.0 46 32.43230116247665 35.0 31.0 40.0 10.0 41.0 47 32.40896459676609 35.0 31.0 40.0 10.0 41.0 48 32.287125499525814 35.0 31.0 40.0 10.0 41.0 49 32.157957122619024 35.0 31.0 40.0 10.0 41.0 50 32.04754570482201 35.0 31.0 40.0 10.0 41.0 51 31.663857661604357 35.0 30.0 39.0 10.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 0.0 12 4.0 13 5.0 14 32.0 15 52.0 16 185.0 17 468.0 18 1017.0 19 2122.0 20 3839.0 21 6163.0 22 9350.0 23 14610.0 24 22407.0 25 36950.0 26 53719.0 27 58546.0 28 53586.0 29 48783.0 30 49885.0 31 55678.0 32 65919.0 33 82317.0 34 121699.0 35 175009.0 36 159246.0 37 164778.0 38 229387.0 39 365080.0 40 101.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.367585301910957 21.966614241139084 25.756637369387718 24.909163087562234 2 39.271923406697255 22.945872935569383 26.184726147273995 11.59747751045937 3 24.018060135692462 22.27684384473584 41.90486030122312 11.800235718348578 4 20.773198857456656 25.492113991551648 41.05845287233308 12.676234278658619 5 19.484496661592566 28.955174770163378 39.7794085030425 11.78092006520156 6 18.3883333454992 36.38350330920935 36.40562647008123 8.822536875210211 7 79.05492551962757 2.3202366841312365 17.652822471741032 0.9720153245001653 8 79.65460916965714 1.8722707515529728 17.422887589075202 1.0502324897146955 9 75.13979984715928 3.6622253766131236 19.163317777868865 2.0346569983587313 10 30.960409087565605 22.1672387431574 34.056416306229465 12.815935863047528 11 26.221729099087614 23.18670094820766 34.053833399122595 16.53773655358213 12 25.848330571681565 23.022068695222014 34.98935112319961 16.140249609896802 13 20.043415299457195 28.428486320980113 35.64625178066178 15.881846598900918 14 16.986769339095837 29.659803058948114 36.20084685663013 17.15258074532592 15 16.332283138277052 26.45666134550369 41.89503402418612 15.316021492033135 16 17.743898022335408 24.756322367020996 41.63685561380822 15.862923996835377 17 17.964231228582225 25.81115916940446 36.298941176536644 19.925668425476672 18 18.394734463111874 26.260865756772127 38.88100603108809 16.4633937490279 19 20.64388505164972 28.62265355523126 34.40999382909802 16.323467564021 20 21.973745310760222 26.84898247497528 35.67836966903414 15.498902545230353 21 19.422226140255226 28.75718932540643 36.30012032978109 15.520464204557257 22 19.806630097942715 25.948277846686494 36.093993112622044 18.151098942748742 23 17.332541990489286 29.086509981532217 36.05648480941795 17.524463218560545 24 16.995641063506387 27.779615135611046 40.11754473342433 15.107199067458236 25 16.741280863634298 29.638129099312216 37.38044930230625 16.240140734747232 26 17.093791533567405 31.559755836668185 34.99884049930964 16.347612130454777 27 15.916547394380157 31.20819971936153 36.42758118048962 16.4476717057687 28 15.19535481001876 29.71387565772887 38.882858986186505 16.207910546065868 29 15.730016581140625 27.542549183324077 39.07034435205248 17.657089883482815 30 16.462776097328433 30.404410257734828 37.074318659987796 16.05849498494895 31 19.221040136691936 29.839539703493497 35.07992132240352 15.859498837411051 32 19.796916121214707 28.465096221712255 35.368252365746386 16.369735291326652 33 19.328679982862973 30.1940717789885 33.651910593231996 16.82533764491653 34 17.08778346703621 30.47802311028059 34.066691784502446 18.36750163818076 35 17.98152547616735 30.79757363952387 33.3680154120944 17.85288547221438 36 20.538996563049043 31.561328040994102 30.413113531681883 17.486561864274968 37 17.69049922540862 33.219498253449444 32.21772334706579 16.872279174076148 38 17.871415023198438 32.78787201582985 31.770936567731965 17.569776393239746 39 17.67017286948065 34.09566526422297 30.42838637370511 17.80577549259127 40 20.392893861047458 31.930178405885883 30.098055014798376 17.578872718268286 41 17.20974160260402 30.96860701012219 31.609055672316682 20.21259571495711 42 18.487494518341165 31.40652206504546 29.69012414237658 20.41585927423679 43 18.296190941969375 32.67147274555726 30.031629382028246 19.00070693044512 44 18.45116536838151 33.16177589462637 30.029944877393326 18.357113859598783 45 17.104796963848845 35.03135143876349 28.313546954724444 19.550304642663225 46 18.38973709936163 34.40364886163984 29.071405589972482 18.135208449026045 47 18.060921794626317 32.39869529501011 30.66573307676456 18.874649833599015 48 18.641065190890874 31.08775763796514 31.565202401654407 18.70597476948958 49 17.99371005969323 31.605967413819343 31.167041656115117 19.233280870372315 50 17.713913839833932 32.934367768912914 31.059626410562068 18.292091980691087 51 16.71343038700371 33.781168248884434 29.911973402794818 19.593427961317037 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1087.0 1 1521.5 2 1956.0 3 43633.5 4 85311.0 5 55471.0 6 25631.0 7 26154.5 8 26678.0 9 29987.5 10 33297.0 11 35828.0 12 38359.0 13 38464.0 14 38569.0 15 36171.0 16 33773.0 17 30812.0 18 27851.0 19 25178.5 20 22506.0 21 21190.0 22 19874.0 23 19140.5 24 18407.0 25 19057.0 26 21273.0 27 22839.0 28 26123.0 29 29407.0 30 32857.5 31 36308.0 32 41980.5 33 47653.0 34 54809.5 35 61966.0 36 64650.5 37 67335.0 38 73316.0 39 79297.0 40 86629.5 41 93962.0 42 103531.5 43 113101.0 44 115918.0 45 118735.0 46 120869.5 47 123004.0 48 119471.5 49 115939.0 50 112022.5 51 108106.0 52 100591.0 53 93076.0 54 84582.0 55 76088.0 56 67056.0 57 58024.0 58 52085.0 59 46146.0 60 40476.5 61 34807.0 62 29531.0 63 24255.0 64 20007.5 65 15760.0 66 12228.5 67 8697.0 68 6934.5 69 5172.0 70 4104.5 71 3037.0 72 2370.0 73 1703.0 74 1550.5 75 1301.5 76 1205.0 77 852.5 78 500.0 79 358.5 80 217.0 81 164.0 82 111.0 83 77.5 84 44.0 85 32.5 86 21.0 87 15.5 88 10.0 89 7.0 90 4.0 91 4.0 92 4.0 93 2.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1780939.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.754767798886494 #Duplication Level Percentage of deduplicated Percentage of total 1 75.29827319296965 23.15780907706901 2 7.702958095891714 4.738053752074051 3 3.6977054112573247 3.4116621393571536 4 2.2156324767228446 2.7256504939713153 5 1.5433870998863226 2.373325594040035 6 1.0554663430765308 1.9476373380515146 7 0.8410586414374431 1.8106594255858852 8 0.6660322350618568 1.638693338872064 9 0.569458904484401 1.5762218740583434 >10 5.8277102912152925 39.560123354927214 >50 0.5334507596763677 10.377390483399955 >100 0.0453496587194022 2.022394970944291 >500 0.0025913923374825247 0.5706922413509035 >1k 7.403978107092928E-4 0.4112969021207259 >5k 0.0 0.0 >10k+ 1.850994526773232E-4 3.6783890141775535 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 64616 3.628198382987851 No Hit CGTTTCTGTCTCTTATACACATCTGACGCTGTGAGACTCGTATGCCGTCTT 2107 0.11830837552549527 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 1852 0.10399008612872197 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCTGTGAGACTCGTATGCCGTCT 1822 0.10230558149380749 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.03543074748770171 0.0 2 0.0 0.0 0.0 0.10881899941547689 0.0 3 0.0 0.0 0.0 0.18810301756545283 0.0 4 0.0 0.0 0.0 0.263737275673114 0.0 5 0.0 0.0 0.0 0.4559392545168588 0.0 6 0.0 0.0 0.0 0.8425892183842344 0.0 7 0.0 0.0 0.0 1.1144682664594352 0.0 8 0.0 0.0 0.0 1.4745030570951616 0.0 9 0.0 0.0 0.0 1.6782158176108222 0.0 10 0.0 0.0 0.0 1.8870943923402206 0.0 11 0.0 0.0 0.0 2.0822723293723144 0.0 12 0.0 0.0 0.0 2.2160219973845257 0.0 13 0.0 0.0 0.0 2.3087820526138176 0.0 14 0.0 0.0 0.0 2.3666167117458823 0.0 15 0.0 0.0 0.0 2.4138951418324828 0.0 16 0.0 0.0 0.0 2.4875079943782463 0.0 17 0.0 0.0 0.0 2.568869568244617 0.0 18 0.0 0.0 0.0 2.656070758178691 0.0 19 0.0 0.0 0.0 2.718790480752008 0.0 20 0.0 0.0 0.0 2.784710762131662 0.0 21 0.0 0.0 0.0 2.8780323189059254 0.0 22 0.0 0.0 0.0 2.973599881860075 0.0 23 0.0 0.0 0.0 3.0889322991972215 0.0 24 0.0 0.0 0.0 3.1856790153958108 0.0 25 5.61501544971501E-5 0.0 0.0 3.273104805947874 0.0 26 5.61501544971501E-5 0.0 0.0 3.3556455330586843 0.0 27 5.61501544971501E-5 0.0 0.0 3.4473948855070273 0.0 28 5.61501544971501E-5 0.0 0.0 3.546724508812486 0.0 29 5.61501544971501E-5 0.0 0.0 3.654869706373997 0.0 30 5.61501544971501E-5 0.0 0.0 3.7823867072370247 0.0 31 5.61501544971501E-5 0.0 0.0 3.8967084217932224 0.0 32 5.61501544971501E-5 0.0 0.0 4.012153139439363 0.0 33 5.61501544971501E-5 0.0 0.0 4.125913352450589 0.0 34 5.61501544971501E-5 0.0 0.0 4.246411584001473 0.0 35 5.61501544971501E-5 0.0 0.0 4.377802945524804 0.0 36 5.61501544971501E-5 0.0 0.0 4.500491033101078 0.0 37 5.61501544971501E-5 0.0 0.0 4.6300855896805 0.0 38 5.61501544971501E-5 0.0 0.0 4.767653468198517 0.0 39 5.61501544971501E-5 0.0 0.0 4.956205686999947 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AATCGCG 25 3.8916725E-5 45.0 1 CGTTTTT 28510 0.0 44.455456 1 GCGTAAG 115 0.0 43.043476 1 TCGTTAG 65 0.0 41.53846 1 CCGGGTA 60 3.6379788E-12 41.249996 5 GTTTTTT 31700 0.0 40.287064 2 TCTAGCG 45 1.929402E-8 40.0 1 GGCGATC 440 0.0 39.886364 8 CGGGTAA 205 0.0 39.512196 6 GTTAGCG 80 0.0 39.375 1 GGCGATA 745 0.0 39.261745 8 ACGGGTA 305 0.0 39.098362 5 TACGATG 35 6.250224E-6 38.571426 1 TAGGGCG 665 0.0 38.571426 5 TGGGCGA 880 0.0 38.352272 6 GGGCGAT 3120 0.0 38.29327 7 AGCGGGT 670 0.0 38.283585 4 GACCGAT 1070 0.0 38.271027 9 AGGGCGA 1655 0.0 38.202415 6 GGACCGA 1115 0.0 38.13901 8 >>END_MODULE