SRR1547391_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547391_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1397920
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	16051	1.1482059059173628	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	4992	0.35710198008469723	No Hit
GAGCTGTCTCTTATACACATCTGACGCGCTGTCTTTCGTATGCCGTCTTCT	1640	0.11731715691885086	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CAGCGCA	30	2.1658398E-6	45.000004	42
CCGCTAG	30	2.1658398E-6	45.000004	1
CACTACC	30	2.1658398E-6	45.000004	24
CCGGTAA	60	0.0	45.000004	20
AATACGA	30	2.1658398E-6	45.000004	20
TCGCGTG	30	2.1658398E-6	45.000004	45
CTTCGTC	20	7.033811E-4	45.0	25
CGACGTG	25	3.8912407E-5	45.0	3
CCCTATT	25	3.8912407E-5	45.0	11
CGGTTTA	20	7.033811E-4	45.0	21
CATGACG	25	3.8912407E-5	45.0	1
CTATACG	35	1.2121745E-7	45.0	1
CGTGAAT	20	7.033811E-4	45.0	15
CGTTGGC	20	7.033811E-4	45.0	40
ATTACGT	25	3.8912407E-5	45.0	27
ATTACGC	25	3.8912407E-5	45.0	12
ATTACGA	20	7.033811E-4	45.0	14
CACGCCC	20	7.033811E-4	45.0	10
CGTCTCA	20	7.033811E-4	45.0	32
TCGATTG	25	3.8912407E-5	45.0	1