##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547390_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2533070 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.266710750196403 31.0 31.0 33.0 30.0 34.0 2 31.6741519184231 31.0 31.0 34.0 30.0 34.0 3 31.80026015862175 31.0 31.0 34.0 30.0 34.0 4 35.58607223645616 37.0 35.0 37.0 33.0 37.0 5 35.479484578002186 37.0 35.0 37.0 33.0 37.0 6 35.50941466283995 37.0 35.0 37.0 33.0 37.0 7 35.90499117671442 37.0 35.0 37.0 35.0 37.0 8 35.90343693620784 37.0 35.0 37.0 35.0 37.0 9 37.65178222473126 39.0 37.0 39.0 35.0 39.0 10 36.770323757337934 39.0 37.0 39.0 32.0 39.0 11 36.595566644427514 39.0 35.0 39.0 32.0 39.0 12 36.105422668935326 38.0 35.0 39.0 32.0 39.0 13 35.85261994338885 38.0 35.0 39.0 31.0 39.0 14 36.88365106372899 39.0 35.0 41.0 31.0 41.0 15 37.07928205695066 39.0 35.0 41.0 32.0 41.0 16 37.189705772047354 39.0 35.0 41.0 32.0 41.0 17 37.113791170397974 39.0 35.0 41.0 32.0 41.0 18 37.013217952918794 39.0 35.0 41.0 32.0 41.0 19 36.96655718160177 38.0 35.0 41.0 31.0 41.0 20 36.83509614815224 38.0 35.0 41.0 31.0 41.0 21 36.697471842467834 38.0 35.0 40.0 31.0 41.0 22 36.58043046579842 38.0 35.0 40.0 31.0 41.0 23 36.49648805599529 38.0 35.0 40.0 31.0 41.0 24 36.40327744594504 38.0 35.0 40.0 30.0 41.0 25 36.30987221040082 38.0 35.0 40.0 30.0 41.0 26 36.080172281066055 38.0 35.0 40.0 30.0 41.0 27 36.074683289447194 38.0 35.0 40.0 30.0 41.0 28 36.14675393889628 38.0 35.0 40.0 30.0 41.0 29 36.18975748794941 38.0 35.0 40.0 30.0 41.0 30 36.18428073444476 38.0 35.0 40.0 30.0 41.0 31 36.09919504790629 38.0 35.0 40.0 30.0 41.0 32 35.957570852759694 38.0 35.0 40.0 30.0 41.0 33 35.79284741440229 38.0 34.0 40.0 29.0 41.0 34 35.62722151381525 38.0 34.0 40.0 28.0 41.0 35 35.50715613859862 38.0 34.0 40.0 27.0 41.0 36 35.286841263762945 38.0 34.0 40.0 27.0 41.0 37 35.24024957857461 38.0 34.0 40.0 27.0 41.0 38 35.163732940660935 38.0 34.0 40.0 27.0 41.0 39 35.04198818035032 38.0 34.0 40.0 26.0 41.0 40 34.923246495359386 37.0 34.0 40.0 25.0 41.0 41 34.927995673234456 37.0 34.0 40.0 25.0 41.0 42 34.85396337250846 37.0 34.0 40.0 25.0 41.0 43 34.74616414074621 37.0 33.0 40.0 25.0 41.0 44 34.65594752612443 37.0 33.0 40.0 24.0 41.0 45 34.490077652808644 37.0 33.0 40.0 24.0 41.0 46 34.41229496223949 36.0 33.0 40.0 24.0 41.0 47 34.38385674300355 36.0 33.0 40.0 24.0 41.0 48 34.27894689053204 36.0 33.0 40.0 23.0 41.0 49 34.144007469197454 36.0 33.0 40.0 24.0 41.0 50 33.9985440591851 36.0 33.0 40.0 24.0 41.0 51 33.51170634842306 35.0 32.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 1.0 11 6.0 12 6.0 13 10.0 14 30.0 15 100.0 16 226.0 17 572.0 18 1190.0 19 2344.0 20 4043.0 21 6378.0 22 9567.0 23 13862.0 24 19727.0 25 27710.0 26 37724.0 27 45999.0 28 52305.0 29 59880.0 30 70719.0 31 85664.0 32 104587.0 33 133740.0 34 209921.0 35 277751.0 36 203788.0 37 254109.0 38 363974.0 39 547020.0 40 115.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.9759540794372 23.22513787617397 29.76494925130375 14.033958793085072 2 30.539227103870008 25.69486828236093 30.52588361158594 13.240021002183122 3 28.823325056157152 25.76438866671667 31.781790475588913 13.630495801537265 4 25.137165573789904 29.163426198249553 31.532527723276498 14.16688050468404 5 23.126561839980734 32.33795355043485 30.49745960435361 14.038025005230805 6 21.738128042257024 41.59916622912119 26.490543095927077 10.172162632694715 7 90.71190294780642 2.735376440445783 5.503519444784391 1.049201166963408 8 91.57172916658442 1.977047614159893 5.16870832626023 1.2825148929954562 9 87.0384947909059 3.790815097885175 7.255938446233228 1.9147516649757015 10 40.35044432250194 25.99604432566017 21.825768731223377 11.82774262061451 11 36.523349137607724 25.29077364620796 21.912975164523683 16.272902051660633 12 33.24775864859637 22.84504573501719 26.023283999257817 17.88391161712862 13 24.213227427587867 29.58354881625853 26.829657293323912 19.37356646282969 14 20.560545109294257 31.186702301949808 28.85324921932674 19.39950336942919 15 20.74463003391142 24.71352943266471 36.83206543838109 17.709775095042772 16 22.80821295897863 22.930830967955877 35.6276376096989 18.633318463366585 17 22.8104237150967 23.382417382859533 28.40047847078841 25.406680431255353 18 24.698764740019026 24.467030125499885 31.098943179619987 19.735261954861098 19 27.224869427216774 25.727634846253757 26.89380869853577 20.1536870279937 20 29.16236029797834 25.936472343835742 26.306418693522087 18.594748664663825 21 26.040338403597218 27.166521256814853 28.330168530676215 18.462971808911714 22 25.88846735384336 23.420079192442373 28.450891605837974 22.240561847876293 23 23.864243783235363 26.805970620630305 28.042375457448866 21.28741013868547 24 23.036039272503324 25.095003296395284 32.876430576336226 18.992526854765167 25 21.89986853896655 26.472106969013886 30.986194617598407 20.64182987442116 26 21.75103727887504 30.00876406889664 27.272834939421337 20.96736371280699 27 20.692795698500237 30.044136166785755 28.86860607878977 20.394462055924233 28 19.23977623989862 28.554678710023808 32.57407019940231 19.631474850675268 29 20.5721121011263 25.738096460026767 31.7998713024117 21.889920136435233 30 22.216046141638408 28.169849234328304 29.95436367727698 19.65974094675631 31 25.43028814837332 26.301089192166028 27.65833553750982 20.610287121950837 32 26.973632785513228 25.717962788237198 27.500029608340864 19.808374817908703 33 25.893559988472486 26.646677746765786 26.963052738376753 20.49670952638498 34 21.766828394004115 27.394702870429953 29.396187235252086 21.442281500313847 35 22.083913985795892 27.2369101525027 29.638936152573752 21.040239709127658 36 25.981634933104893 27.9796057748108 26.198565377190526 19.840193914893785 37 22.93462083558686 29.844536471554278 27.74787116029166 19.4729715325672 38 22.814450449454615 30.04638640069165 26.16860173623311 20.970561413620626 39 22.433134496875333 29.749750302992023 27.161112799883146 20.6560024002495 40 24.468017070195454 26.54387758727552 26.872095915233295 22.116009427295733 41 20.83669223511391 25.627558654123256 28.02307081920358 25.512678291559254 42 22.22875798931731 26.746990805623216 26.389243092374077 24.635008112685398 43 21.79473918999475 26.362319241079007 27.929903239942043 23.913038328984197 44 21.29522674067436 28.506042075426265 27.467578866750625 22.731152317148755 45 20.394462055924233 30.22494443501364 26.17144413695634 23.209149372105784 46 22.47059891751906 29.041202967150532 26.836013217163362 21.652184898167047 47 22.09007252069623 26.777586091185796 28.502410118946575 22.6299312691714 48 22.535697789638657 25.826684615900863 30.292293541039133 21.34532405342134 49 22.75495742320583 25.704658773740956 29.88618553770721 21.654198265346004 50 21.529211589099393 28.72909157662441 28.43940356958157 21.30229326469462 51 20.665319158175652 29.31130999143332 27.098540506184193 22.924830344206832 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1428.0 1 2465.0 2 3502.0 3 13748.0 4 23994.0 5 16728.5 6 9463.0 7 9714.5 8 9966.0 9 10850.0 10 11734.0 11 12011.5 12 12289.0 13 12077.5 14 11866.0 15 11466.5 16 11067.0 17 10790.5 18 10514.0 19 10158.0 20 9802.0 21 10305.5 22 10809.0 23 11072.5 24 11336.0 25 14054.5 26 18697.0 27 20621.0 28 26304.0 29 31987.0 30 36519.0 31 41051.0 32 49529.5 33 58008.0 34 65195.5 35 72383.0 36 76694.0 37 81005.0 38 93593.5 39 106182.0 40 122745.5 41 139309.0 42 163207.0 43 187105.0 44 190338.5 45 193572.0 46 195130.0 47 196688.0 48 195897.0 49 195106.0 50 188059.0 51 181012.0 52 175543.0 53 170074.0 54 156761.5 55 143449.0 56 135570.5 57 127692.0 58 121853.0 59 116014.0 60 106008.0 61 96002.0 62 83671.0 63 71340.0 64 61193.0 65 51046.0 66 43554.0 67 36062.0 68 29084.5 69 22107.0 70 18770.5 71 15434.0 72 12925.0 73 10416.0 74 8692.5 75 5515.0 76 4061.0 77 3095.5 78 2130.0 79 1500.5 80 871.0 81 680.5 82 490.0 83 331.5 84 173.0 85 128.0 86 83.0 87 54.5 88 26.0 89 26.5 90 27.0 91 23.0 92 19.0 93 15.5 94 12.0 95 6.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2533070.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.036961620940005 #Duplication Level Percentage of deduplicated Percentage of total 1 81.42869568020436 15.501549545072535 2 6.191957947321517 2.3575213160326833 3 1.947519599118144 1.1122456759332169 4 0.9624597770714847 0.732892393512333 5 0.6164147141713211 0.5867331628131071 6 0.4399857869646214 0.5025595524122749 7 0.3654484237338209 0.4869919331937638 8 0.296862457922016 0.4521087374527468 9 0.26300881691985645 0.45061998783049284 >10 4.315544534956135 21.410682467065083 >50 2.125096030661675 29.087104260380265 >100 1.0447018960805026 26.422498080040558 >500 0.0018853648973302022 0.22125189252988586 >1k 2.0948498859224468E-4 0.10603979492375026 >5k 0.0 0.0 >10k+ 2.0948498859224468E-4 0.5692012008073288 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14273 0.5634664655931341 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2659 0.10497143782051029 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.895557564536314E-5 0.0 0.0 0.0287003517470895 0.0 2 7.895557564536314E-5 0.0 0.0 0.08902241154014694 0.0 3 7.895557564536314E-5 0.0 0.0 0.12514458739790058 0.0 4 7.895557564536314E-5 0.0 0.0 0.22778683573687264 0.0 5 7.895557564536314E-5 0.0 0.0 0.361142803001891 0.0 6 7.895557564536314E-5 0.0 0.0 0.6032995535062198 0.0 7 7.895557564536314E-5 0.0 0.0 0.7122187701089981 0.0 8 7.895557564536314E-5 0.0 0.0 0.9640081008420612 0.0 9 7.895557564536314E-5 0.0 0.0 1.0509776674154288 0.0 10 7.895557564536314E-5 0.0 0.0 1.212481297398019 0.0 11 1.184333634680447E-4 0.0 0.0 1.405409246487464 0.0 12 1.184333634680447E-4 0.0 0.0 1.5608727749331839 0.0 13 1.184333634680447E-4 0.0 0.0 1.6388019280951573 0.0 14 1.184333634680447E-4 0.0 0.0 1.6755952263458964 0.0 15 1.184333634680447E-4 0.0 0.0 1.7157836143493863 0.0 16 1.184333634680447E-4 0.0 0.0 1.7971473350519331 0.0 17 1.184333634680447E-4 0.0 0.0 1.892249325916773 0.0 18 1.184333634680447E-4 0.0 0.0 2.013011878866356 0.0 19 1.184333634680447E-4 0.0 0.0 2.0819795741925806 0.0 20 1.184333634680447E-4 0.0 0.0 2.163106428168191 0.0 21 1.184333634680447E-4 0.0 0.0 2.267998910413056 0.0 22 1.184333634680447E-4 0.0 0.0 2.3846952512169026 0.0 23 1.184333634680447E-4 0.0 0.0 2.5114189501277107 0.0 24 1.184333634680447E-4 0.0 0.0 2.6135874650128104 0.0 25 1.184333634680447E-4 0.0 0.0 2.709952745087976 0.0 26 1.184333634680447E-4 0.0 0.0 2.7981066452960244 0.0 27 1.184333634680447E-4 0.0 0.0 2.8858657676258455 0.0 28 1.184333634680447E-4 0.0 0.0 2.979625513704714 0.0 29 1.184333634680447E-4 0.0 0.0 3.0842416514348203 0.0 30 1.184333634680447E-4 0.0 0.0 3.2187029967588736 0.0 31 1.184333634680447E-4 0.0 0.0 3.333464925959409 0.0 32 1.184333634680447E-4 0.0 0.0 3.448542677462526 0.0 33 1.184333634680447E-4 0.0 0.0 3.562475573118785 0.0 34 1.5791115129072628E-4 0.0 0.0 3.686198960155069 0.0 35 1.5791115129072628E-4 0.0 0.0 3.82077873884259 0.0 36 1.5791115129072628E-4 0.0 0.0 3.9404753915209607 0.0 37 1.5791115129072628E-4 0.0 0.0 4.0716600804557315 0.0 38 1.5791115129072628E-4 0.0 0.0 4.216306695038037 0.0 39 1.5791115129072628E-4 0.0 0.0 4.425657403861718 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAATACG 30 2.166542E-6 45.000004 10 ACGTTAG 75 0.0 45.000004 1 TCGATAG 165 0.0 40.90909 1 CGTTTTT 8200 0.0 40.85671 1 CGTTAGG 420 0.0 39.642853 2 ACGGGTA 640 0.0 39.375 5 GTTACGC 40 3.4604273E-7 39.375 40 TTAATCG 275 0.0 39.272728 20 CGGGTAT 445 0.0 38.932587 6 AGGGTAC 1495 0.0 38.678932 6 ACACGAC 955 0.0 38.638744 26 CACGACC 955 0.0 38.638744 27 TATCGCG 130 0.0 38.07692 1 TACGGGT 675 0.0 38.0 4 TAATCGT 285 0.0 37.894737 21 AACACGT 945 0.0 37.61905 41 TTACGCG 60 1.5643309E-10 37.500004 1 CGGTCGA 30 1.1403099E-4 37.500004 31 TCGGTAA 30 1.1403099E-4 37.500004 37 CGCAATC 175 0.0 37.285713 20 >>END_MODULE