SRR1547389_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547389_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1695040
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	13244	0.7813384934868793	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	2070	0.12212101189352463	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATGTACG	40	6.8175723E-9	45.0	1
AATGCGT	20	7.0342363E-4	45.0	28
GTATGCG	80	0.0	45.0	1
TTACGCG	20	7.0342363E-4	45.0	1
CGGTCTA	20	7.0342363E-4	45.0	31
GCGCTTA	20	7.0342363E-4	45.0	8
GCGTAAA	20	7.0342363E-4	45.0	45
TACCGTT	20	7.0342363E-4	45.0	14
TCGTTAG	30	2.1661144E-6	44.999996	1
TTATACG	30	2.1661144E-6	44.999996	1
CTACGTT	30	2.1661144E-6	44.999996	21
CGGGTAT	140	0.0	43.392857	6
TACGTAG	125	0.0	43.2	1
GCGATAC	105	0.0	42.857143	9
CGTTTTT	7145	0.0	42.197342	1
CGTTAGG	230	0.0	42.06522	2
TCGTAAG	70	0.0	41.785713	1
ACGGGAT	505	0.0	40.9901	5
GTAATCG	55	6.184564E-11	40.909092	1
TAAGGGA	1815	0.0	40.661156	4