SRR1547385_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547385_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2491372
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	34534	1.3861438596885571	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTATTG	20	7.0348737E-4	45.000004	11
CCACGCG	20	7.0348737E-4	45.000004	45
TCGAATC	35	1.2126839E-7	45.000004	41
GTACGAC	20	7.0348737E-4	45.000004	33
CGTTTTT	15280	0.0	43.380238	1
GCGATAC	80	0.0	42.187504	9
ACGTGCG	60	3.6379788E-12	41.250004	1
TTTGACG	180	0.0	41.25	1
TTACGCG	50	1.0822987E-9	40.5	1
GCGATCG	90	0.0	40.0	9
AGGGCGA	2015	0.0	39.640198	6
TACGGGA	1035	0.0	39.56522	4
TAGGGAC	2650	0.0	39.31132	5
AAGGGAT	5075	0.0	38.748768	5
ACATACG	930	0.0	38.70968	17
CGAGGGA	1705	0.0	38.665688	4
CGGGATC	815	0.0	38.650307	6
TGGGCGA	1060	0.0	38.632076	6
CGGTTTA	35	6.2512263E-6	38.57143	34
CAACCGG	70	0.0	38.57143	2