##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547385_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2491372 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.270059228409085 31.0 31.0 33.0 30.0 34.0 2 31.669662740048455 31.0 31.0 34.0 30.0 34.0 3 31.708672169391 31.0 31.0 34.0 30.0 34.0 4 35.51281221752512 37.0 35.0 37.0 33.0 37.0 5 35.40529314771138 37.0 35.0 37.0 33.0 37.0 6 35.44840513580469 37.0 35.0 37.0 33.0 37.0 7 35.92884362511901 37.0 35.0 37.0 35.0 37.0 8 35.94703079267167 37.0 35.0 37.0 35.0 37.0 9 37.69228561611835 39.0 37.0 39.0 35.0 39.0 10 36.95933044121873 39.0 37.0 39.0 32.0 39.0 11 36.535989808025455 39.0 35.0 39.0 32.0 39.0 12 36.20577938581633 38.0 35.0 39.0 32.0 39.0 13 36.014316208097384 38.0 35.0 39.0 31.0 39.0 14 37.11711659278502 39.0 35.0 41.0 31.0 41.0 15 37.30967956611859 39.0 35.0 41.0 32.0 41.0 16 37.42238252657572 39.0 35.0 41.0 32.0 41.0 17 37.338141393577516 39.0 35.0 41.0 32.0 41.0 18 37.19071499559279 39.0 35.0 41.0 32.0 41.0 19 37.08851468187007 38.0 35.0 41.0 32.0 41.0 20 36.923810253948425 38.0 35.0 41.0 32.0 41.0 21 36.79028663724245 38.0 35.0 41.0 31.0 41.0 22 36.68550702183375 38.0 35.0 40.0 31.0 41.0 23 36.596217265025054 38.0 35.0 40.0 31.0 41.0 24 36.51320878616281 38.0 35.0 40.0 31.0 41.0 25 36.423335816570145 38.0 35.0 40.0 31.0 41.0 26 36.22365547979186 38.0 35.0 40.0 30.0 41.0 27 36.20545827760768 38.0 35.0 40.0 30.0 41.0 28 36.224681019133236 38.0 35.0 40.0 30.0 41.0 29 36.25649963152833 38.0 35.0 40.0 30.0 41.0 30 36.23125570970534 38.0 35.0 40.0 30.0 41.0 31 36.1467424375003 38.0 35.0 40.0 30.0 41.0 32 35.93905245784251 38.0 35.0 40.0 30.0 41.0 33 35.72248744868289 38.0 35.0 40.0 29.0 41.0 34 35.50799117915751 38.0 34.0 40.0 27.0 41.0 35 35.35140115566844 38.0 34.0 40.0 26.0 41.0 36 35.1059841725764 38.0 34.0 40.0 25.0 41.0 37 35.05618711296426 38.0 34.0 40.0 25.0 41.0 38 35.00681150787598 38.0 34.0 40.0 25.0 41.0 39 34.89724256353527 38.0 34.0 40.0 24.0 41.0 40 34.78589187002182 38.0 34.0 40.0 24.0 41.0 41 34.78570522587554 38.0 34.0 40.0 24.0 41.0 42 34.7129894692563 38.0 34.0 40.0 24.0 41.0 43 34.61079236661566 37.0 33.0 40.0 23.0 41.0 44 34.525559410637996 37.0 33.0 40.0 23.0 41.0 45 34.39037446033752 37.0 33.0 40.0 23.0 41.0 46 34.30590935436378 37.0 33.0 40.0 23.0 41.0 47 34.27877009133923 37.0 33.0 40.0 23.0 41.0 48 34.18456296370032 37.0 33.0 40.0 23.0 41.0 49 34.056509023943434 37.0 33.0 40.0 23.0 41.0 50 33.928035636588994 36.0 33.0 40.0 22.0 41.0 51 33.46790764285703 36.0 32.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 0.0 11 1.0 12 1.0 13 4.0 14 25.0 15 65.0 16 213.0 17 521.0 18 1178.0 19 2342.0 20 3985.0 21 6408.0 22 9526.0 23 14569.0 24 20968.0 25 30893.0 26 42601.0 27 50718.0 28 54457.0 29 59140.0 30 68101.0 31 81031.0 32 98914.0 33 124604.0 34 187821.0 35 259276.0 36 201484.0 37 244051.0 38 353038.0 39 575254.0 40 182.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.693999932567277 24.510831782648275 29.904646917441475 15.890521367342975 2 31.893711577395912 25.774793968945627 29.69676949086688 12.634724962791585 3 26.533693081563094 25.476925966896957 34.7606860797986 13.228694871741354 4 23.588849838562847 28.216902172778696 34.18626363305039 14.007984355608075 5 21.71771216823501 32.55009689440196 32.252670416140184 13.479520521222843 6 20.877251570620526 40.50603442601105 28.473788739698445 10.142925263669976 7 88.61338250570368 2.4747408255370935 7.919812858136 0.9920638106232229 8 89.48535184629193 1.7889741074395955 7.5311916486177095 1.1944823976507724 9 84.83598595472695 4.838980288772611 8.65306345258757 1.671970303912864 10 40.26568493183675 38.58074988399966 13.321856390775846 7.83170879338774 11 27.613258879043357 25.019948847462363 32.25993548936088 15.106856784133402 12 29.442451789616324 23.213113095916626 30.501787769951655 16.84264734451539 13 21.199925181787385 30.813864810233078 31.52540046207471 16.460809545904826 14 17.1682109295601 32.758094736554796 31.405747515826622 18.667946818058486 15 16.04473358454699 27.424005728570442 40.12568175286549 16.40557893401708 16 19.265689748459884 25.09765703395559 39.07080114892517 16.565852068659357 17 19.105416613817606 25.577392697678224 31.39735856387565 23.919832124628517 18 19.697178903832906 27.124572324004603 33.940214468172556 19.238034303989927 19 23.581183380081335 27.6014180138494 29.786800204867035 19.03059840120223 20 25.778326159240773 27.100449069829796 29.994075553550413 17.127149217379017 21 22.274714494663982 28.585133011047724 31.76835896044429 17.371793533844002 22 22.421501084542975 26.068728395438335 30.33934715490099 21.170423365117692 23 18.982592724009102 30.277774655892415 30.845132722050337 19.894499898048142 24 19.50563785737337 27.10161308708615 36.27707945662068 17.11566959891979 25 18.147952212676387 29.192669741812942 33.074587014705145 19.584791030805516 26 18.395366087440976 33.568451439608374 29.47652939825927 18.559653074691372 27 18.57277837271993 32.731844140497685 30.9325945703813 17.762782916401086 28 17.174352124050525 30.204883092528934 35.108566685344464 17.51219809807608 29 17.488636783266408 27.1117681341847 34.76040511011603 20.639189972432863 30 18.48660095722357 30.354318825129283 32.41378645983017 18.745293757816977 31 22.382727268348525 28.967653164601675 29.62347654224259 19.026143024807215 32 23.356528049604798 28.898855730898475 29.962727364680987 17.78188885481574 33 21.878145856981615 30.185215214749146 29.356675759380774 18.57996316888847 34 18.764439834757717 30.09855613693981 30.932153046594408 20.20485098170807 35 18.99483497446387 29.21534800904883 31.292918119012334 20.496898897474967 36 22.805707056192333 29.274110811231722 29.1051677549559 18.81501437762004 37 19.60140838060314 32.2075547128249 30.15876392606162 18.032272980510335 38 19.317026923317755 32.107890752565254 28.726500899905755 19.848581424211236 39 19.29270297651254 32.282132094283796 29.054553073567497 19.37061185563617 40 21.885732038410964 29.544524061440846 28.86052343849092 19.70922046165727 41 17.719072061498643 29.190903646665372 29.91672861379192 23.173295678044063 42 19.74759289259091 29.685410287985896 27.780716809854166 22.786280009569023 43 20.01427325987448 30.04689785387329 28.98487259229051 20.95395629396172 44 19.27488147093248 31.425415393606414 28.99763664358434 20.302066491876765 45 18.145905147846246 33.10015525581888 27.47682802889332 21.277111567441555 46 19.76421024238853 32.24869670205814 27.83382007985961 20.153272975693714 47 19.508527831251214 30.163821380347855 29.3416639506264 20.98598683777453 48 20.18658795234112 28.47254444538993 30.470439581082232 20.87042802118672 49 19.21836642621014 29.204390191428658 30.244499817771093 21.332743564590114 50 18.447345478716144 31.986993512008645 29.198971490407693 20.366689518867513 51 17.622458629221168 31.83844082698208 28.193501412073346 22.345599131723404 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1202.0 1 1950.0 2 2698.0 3 25203.0 4 47708.0 5 31356.0 6 15004.0 7 15020.5 8 15037.0 9 16286.0 10 17535.0 11 18954.5 12 20374.0 13 20397.5 14 20421.0 15 20542.5 16 20664.0 17 20134.0 18 19604.0 19 19289.5 20 18975.0 21 19168.5 22 19362.0 23 20206.0 24 21050.0 25 23696.5 26 30108.5 27 33874.0 28 40710.5 29 47547.0 30 54215.0 31 60883.0 32 69249.5 33 77616.0 34 90726.5 35 103837.0 36 106490.0 37 109143.0 38 117970.0 39 126797.0 40 145837.0 41 164877.0 42 180724.5 43 196572.0 44 199563.5 45 202555.0 46 205637.0 47 208719.0 48 200941.0 49 193163.0 50 180034.5 51 166906.0 52 152233.0 53 137560.0 54 120861.0 55 104162.0 56 94935.5 57 85709.0 58 76740.5 59 67772.0 60 61415.5 61 55059.0 62 46319.0 63 37579.0 64 28554.0 65 19529.0 66 15047.0 67 10565.0 68 7980.0 69 5395.0 70 4663.0 71 3931.0 72 3035.5 73 2140.0 74 1850.5 75 1383.5 76 1206.0 77 811.0 78 416.0 79 316.0 80 216.0 81 127.5 82 39.0 83 41.0 84 43.0 85 29.0 86 15.0 87 9.5 88 4.0 89 2.5 90 1.0 91 2.0 92 3.0 93 1.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2491372.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.487865744949122 #Duplication Level Percentage of deduplicated Percentage of total 1 79.3160987575461 17.836497802728225 2 6.96384671791385 3.1320410012170252 3 2.58927355869875 1.7468170849489242 4 1.477496042852937 1.3290293060148177 5 0.9771789464012748 1.0987334477731352 6 0.6942924765818845 0.9367893600660991 7 0.5121609406707316 0.8062184531527186 8 0.43473567895529447 0.7821022066308773 9 0.3442540807492317 0.6967385595035638 >10 4.397985100692584 23.748620606901707 >50 1.6223942871332369 26.210421103008358 >100 0.6677581387614827 19.794361212670047 >500 0.0019841431049982287 0.29878601178670766 >1k 3.6075329181785976E-4 0.182046106556984 >5k 0.0 0.0 >10k+ 1.8037664590892988E-4 1.4007977370407498 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 34534 1.3861438596885571 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.027705216242296E-5 0.0 0.0 0.04728318372366712 0.0 2 8.027705216242296E-5 0.0 0.0 0.1532087540519842 0.0 3 8.027705216242296E-5 0.0 0.0 0.2234511746941043 0.0 4 8.027705216242296E-5 0.0 0.0 0.35474429350574704 0.0 5 8.027705216242296E-5 0.0 0.0 0.6295326430577208 0.0 6 8.027705216242296E-5 0.0 0.0 1.0399089337120269 0.0 7 8.027705216242296E-5 0.0 0.0 1.2552922646638078 0.0 8 8.027705216242296E-5 0.0 0.0 1.6750609704211175 0.0 9 8.027705216242296E-5 0.0 0.0 1.8404316978757087 0.0 10 8.027705216242296E-5 0.0 0.0 2.057862093657631 0.0 11 8.027705216242296E-5 0.0 0.0 2.359141870423205 0.0 12 8.027705216242296E-5 0.0 0.0 2.590821442963957 0.0 13 8.027705216242296E-5 0.0 0.0 2.7167761378067987 0.0 14 8.027705216242296E-5 0.0 0.0 2.7833258140494475 0.0 15 8.027705216242296E-5 0.0 0.0 2.854250589634948 0.0 16 8.027705216242296E-5 0.0 0.0 2.973100765361415 0.0 17 8.027705216242296E-5 0.0 0.0 3.128436861295704 0.0 18 8.027705216242296E-5 0.0 0.0 3.3103848000218354 0.0 19 8.027705216242296E-5 0.0 0.0 3.437904897381844 0.0 20 8.027705216242296E-5 0.0 0.0 3.566147488211315 0.0 21 8.027705216242296E-5 0.0 0.0 3.7366960855303826 0.0 22 8.027705216242296E-5 0.0 0.0 3.937228161832115 0.0 23 8.027705216242296E-5 0.0 0.0 4.156665483918098 0.0 24 8.027705216242296E-5 0.0 0.0 4.320470808855522 0.0 25 8.027705216242296E-5 0.0 0.0 4.4602331566703 0.0 26 8.027705216242296E-5 0.0 0.0 4.601279937319678 0.0 27 8.027705216242296E-5 0.0 0.0 4.739476882617288 0.0 28 8.027705216242296E-5 0.0 0.0 4.888992892269801 0.0 29 1.2041557824363443E-4 0.0 0.0 5.05127295321614 0.0 30 1.2041557824363443E-4 0.0 0.0 5.24578425060569 0.0 31 1.2041557824363443E-4 0.0 0.0 5.417537003707194 0.0 32 1.2041557824363443E-4 0.0 0.0 5.582988008213948 0.0 33 1.2041557824363443E-4 0.0 0.0 5.748840397981514 0.0 34 1.2041557824363443E-4 0.0 0.0 5.917542623100846 0.0 35 1.2041557824363443E-4 0.0 0.0 6.107919652304032 0.0 36 1.2041557824363443E-4 0.0 0.0 6.293680751007878 0.0 37 1.2041557824363443E-4 0.0 0.0 6.488633572184322 0.0 38 1.2041557824363443E-4 0.0 0.0 6.673672177418707 0.0 39 1.2041557824363443E-4 0.0 0.0 6.862644358209051 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTATTG 20 7.0348737E-4 45.000004 11 CCACGCG 20 7.0348737E-4 45.000004 45 TCGAATC 35 1.2126839E-7 45.000004 41 GTACGAC 20 7.0348737E-4 45.000004 33 CGTTTTT 15280 0.0 43.380238 1 GCGATAC 80 0.0 42.187504 9 ACGTGCG 60 3.6379788E-12 41.250004 1 TTTGACG 180 0.0 41.25 1 TTACGCG 50 1.0822987E-9 40.5 1 GCGATCG 90 0.0 40.0 9 AGGGCGA 2015 0.0 39.640198 6 TACGGGA 1035 0.0 39.56522 4 TAGGGAC 2650 0.0 39.31132 5 AAGGGAT 5075 0.0 38.748768 5 ACATACG 930 0.0 38.70968 17 CGAGGGA 1705 0.0 38.665688 4 CGGGATC 815 0.0 38.650307 6 TGGGCGA 1060 0.0 38.632076 6 CGGTTTA 35 6.2512263E-6 38.57143 34 CAACCGG 70 0.0 38.57143 2 >>END_MODULE