##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547383_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1863320 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.303388575231306 31.0 31.0 33.0 30.0 34.0 2 31.717386707597193 31.0 31.0 34.0 30.0 34.0 3 31.83358467681343 31.0 31.0 34.0 30.0 34.0 4 35.620189768799776 37.0 35.0 37.0 33.0 37.0 5 35.527672648820385 37.0 35.0 37.0 33.0 37.0 6 35.55995159178241 37.0 35.0 37.0 33.0 37.0 7 35.905520790846445 37.0 35.0 37.0 35.0 37.0 8 35.8952858338879 37.0 35.0 37.0 35.0 37.0 9 37.65136530493957 39.0 37.0 39.0 35.0 39.0 10 36.92388263958955 39.0 37.0 39.0 32.0 39.0 11 36.6643373118949 39.0 35.0 39.0 32.0 39.0 12 36.2793658630831 38.0 35.0 39.0 32.0 39.0 13 36.12589624970483 38.0 35.0 39.0 31.0 39.0 14 37.191180795569196 39.0 35.0 41.0 32.0 41.0 15 37.33727164416203 39.0 35.0 41.0 32.0 41.0 16 37.419292982418476 39.0 35.0 41.0 32.0 41.0 17 37.322544705149944 39.0 35.0 41.0 32.0 41.0 18 37.19756778223815 39.0 35.0 41.0 32.0 41.0 19 37.156922053109504 39.0 35.0 41.0 32.0 41.0 20 37.0332814546079 39.0 35.0 41.0 32.0 41.0 21 36.904599854024 39.0 35.0 41.0 31.0 41.0 22 36.80277086061439 38.0 35.0 41.0 31.0 41.0 23 36.70359304896636 38.0 35.0 40.0 31.0 41.0 24 36.5874562608677 38.0 35.0 40.0 31.0 41.0 25 36.47352306635468 38.0 35.0 40.0 30.0 41.0 26 36.265350020393704 38.0 35.0 40.0 30.0 41.0 27 36.27477352252968 38.0 35.0 40.0 30.0 41.0 28 36.33093027499302 38.0 35.0 40.0 30.0 41.0 29 36.35891365948952 38.0 35.0 40.0 30.0 41.0 30 36.34619281712212 38.0 35.0 40.0 30.0 41.0 31 36.278456733142995 38.0 35.0 40.0 30.0 41.0 32 36.12846692999592 38.0 35.0 40.0 30.0 41.0 33 35.96744949874418 38.0 35.0 40.0 29.0 41.0 34 35.76734323680313 38.0 35.0 40.0 28.0 41.0 35 35.63616340725157 38.0 34.0 40.0 28.0 41.0 36 35.41748062597944 38.0 34.0 40.0 27.0 41.0 37 35.40021198720563 38.0 34.0 40.0 27.0 41.0 38 35.3102108065174 38.0 34.0 40.0 27.0 41.0 39 35.18056426164051 38.0 34.0 40.0 26.0 41.0 40 35.06473820921796 38.0 34.0 40.0 25.0 41.0 41 35.03343494407831 38.0 34.0 40.0 25.0 41.0 42 34.95130895391023 38.0 34.0 40.0 25.0 41.0 43 34.84439173088895 37.0 34.0 40.0 25.0 41.0 44 34.75305046905523 37.0 34.0 40.0 24.0 41.0 45 34.59339190262542 37.0 33.0 40.0 24.0 41.0 46 34.509990769164716 37.0 33.0 40.0 24.0 41.0 47 34.47130068909259 37.0 33.0 40.0 24.0 41.0 48 34.35697357405062 37.0 33.0 40.0 23.0 41.0 49 34.23165532490393 36.0 33.0 40.0 24.0 41.0 50 34.10591256466952 36.0 33.0 40.0 24.0 41.0 51 33.61235912242664 35.0 32.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 8.0 13 7.0 14 23.0 15 72.0 16 191.0 17 411.0 18 841.0 19 1684.0 20 2877.0 21 4484.0 22 6945.0 23 9834.0 24 14040.0 25 19864.0 26 27229.0 27 33152.0 28 37742.0 29 42789.0 30 49919.0 31 60230.0 32 73790.0 33 94475.0 34 143585.0 35 184330.0 36 153814.0 37 193958.0 38 278585.0 39 428320.0 40 120.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.76726488203851 23.920206942446814 28.59127793401026 14.72125024150441 2 31.23934697207136 26.03320953996093 29.300012880235276 13.427430607732434 3 28.59900607517764 25.93773479595561 31.776989459674134 13.686269669192624 4 24.966082047098727 28.308503101989995 31.778170147908035 14.947244703003241 5 22.976515037674687 32.94978854947084 29.97273683532619 14.100959577528283 6 22.402324882467852 41.36423158663032 26.40378464246614 9.829658888435695 7 90.54821501406093 2.580823476375502 5.821759010797931 1.049202498765644 8 91.12691325161539 2.0513384711160723 5.686838546250779 1.1349097310177532 9 86.19126076036322 4.449316274177275 7.173539703325248 2.1858832621342548 10 40.149840070411955 32.776764055556754 16.036000257604705 11.037395616426593 11 32.621181546916254 25.019213017624452 25.564637314041605 16.794968121417682 12 31.019846295859004 22.505635102934544 27.91195285833888 18.56256574286757 13 24.205128480346907 27.3121632355151 29.206309168580812 19.276399115557176 14 21.081403086963054 28.634534057488782 30.034561964665222 20.249500890882942 15 20.874406972500697 25.878539381319364 34.70906768563639 18.537985960543544 16 24.101066912822276 24.32013824785866 33.43204602537406 18.146748813945003 17 24.178294656849065 23.602816478114335 28.799508404353517 23.41938046068308 18 24.124358671618403 24.73520382972329 30.807215078462104 20.333222420196208 19 26.531084301139902 25.877519696026447 27.402861558937808 20.188534443895843 20 28.389594916600476 25.896088701886953 27.438550544189937 18.275765837322627 21 26.61845523044888 26.182566601549922 28.76183371616255 18.437144451838652 22 25.95388875770131 23.70634136916901 29.01476933645321 21.32500053667647 23 24.003338127643133 26.34061782195222 28.588111542837513 21.06793250756714 24 23.077034540497607 25.059356417577227 32.374471373677096 19.489137668248073 25 22.599607152823992 26.4714058776807 29.946010347122343 20.982976622372966 26 22.047850074061355 29.08883068930726 27.845029302535256 21.018289934096128 27 21.249651160294526 28.511313139986687 29.210548912693472 21.02848678702531 28 20.364403323100703 27.703400382113646 31.67840199214306 20.253794302642593 29 21.43754159242642 25.422203378915054 31.62972543631797 21.510529592340554 30 21.954414700641863 26.83774123607325 30.450325225940794 20.757518837344097 31 25.04647618229826 26.102065131056396 28.157106669815168 20.694352016830177 32 26.102387136938365 25.894532340124083 28.107839769873127 19.89524075306442 33 25.03928471760084 26.553946718760063 27.845619646652214 20.561148916986884 34 22.391430350127727 26.648187106884485 29.324431659618316 21.63595088336947 35 22.58983964107078 27.132215615138573 29.53545284760535 20.742491896185303 36 24.77749393555589 27.75272094970268 27.14289547689071 20.326889637850716 37 23.174011978618807 28.981012386492928 27.48518772942919 20.359787905459072 38 22.713865573277804 29.286327630251378 26.84241032136187 21.157396475108943 39 23.00608591116931 28.506751389992058 27.494203894124464 20.992958804714164 40 24.23545070089947 26.72863490973102 27.38359487366636 21.65231951570315 41 21.149346328059593 26.748867612648393 28.32229568726789 23.779490372024128 42 22.16940729450658 26.867097438979886 27.303576411995795 23.65991885451774 43 22.324560461971103 26.66493141274714 27.69052014683468 23.319987978447074 44 21.89076487130498 27.534776635253206 28.29793057553185 22.276527917909966 45 21.286842839662537 29.030386621728958 27.178155120966874 22.50461541764163 46 22.26021295322328 28.85602043663998 27.319623038447503 21.564143571689243 47 22.202788570937894 27.01978189468261 28.77229890732671 22.00513062705279 48 22.65225511452676 26.24176201618616 29.79778030612026 21.30820256316682 49 22.695833243887257 26.302406457291287 29.019760427623808 21.981999871197647 50 21.38977738660026 28.459899534164823 28.55854066934289 21.591782409892023 51 21.23483888972372 28.403602172466353 27.769035914389367 22.59252302342056 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1023.0 1 1722.5 2 2422.0 3 12210.5 4 21999.0 5 14982.0 6 7965.0 7 7942.5 8 7920.0 9 8393.5 10 8867.0 11 9132.5 12 9398.0 13 9241.0 14 9084.0 15 8717.0 16 8350.0 17 7920.5 18 7491.0 19 7962.0 20 8433.0 21 8144.0 22 7855.0 23 8965.5 24 10076.0 25 11393.0 26 15256.5 27 17803.0 28 22211.0 29 26619.0 30 31321.0 31 36023.0 32 41111.5 33 46200.0 34 51428.5 35 56657.0 36 60522.5 37 64388.0 38 71085.0 39 77782.0 40 91579.5 41 105377.0 42 115636.0 43 125895.0 44 129175.0 45 132455.0 46 131888.0 47 131321.0 48 130708.0 49 130095.0 50 126320.5 51 122546.0 52 117296.0 53 112046.0 54 107847.5 55 103649.0 56 98918.0 57 94187.0 58 89977.5 59 85768.0 60 79401.0 61 73034.0 62 66668.0 63 60302.0 64 52366.0 65 44430.0 66 38177.5 67 31925.0 68 26757.5 69 21590.0 70 18519.5 71 15449.0 72 12801.0 73 10153.0 74 8332.0 75 5206.5 76 3902.0 77 2900.0 78 1898.0 79 1414.5 80 931.0 81 695.5 82 460.0 83 318.5 84 177.0 85 128.0 86 79.0 87 53.5 88 28.0 89 22.5 90 17.0 91 16.5 92 16.0 93 14.0 94 12.0 95 7.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1863320.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.32565882033604 #Duplication Level Percentage of deduplicated Percentage of total 1 77.08349613693444 16.43856339294955 2 5.114872199648292 2.181560388786424 3 1.9524041778882955 1.2490891613113337 4 1.2055051795592429 1.0283276866171343 5 0.9074625833362774 0.9676118722225107 6 0.7164128360985392 0.9166785430288062 7 0.6314618318460639 0.9426437708809496 8 0.5696247436929885 0.971809835169443 9 0.5077438536386849 0.974517497173911 >10 9.751493770270535 51.871556636006666 >50 1.5186324527747792 20.431434012997833 >100 0.03987432801209884 1.165353547977941 >500 5.079531499069652E-4 0.06949007419201253 >1k 2.539765749534826E-4 0.06932758765843806 >5k 0.0 0.0 >10k+ 2.539765749534826E-4 0.7220359930270608 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13331 0.7154434020994783 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.366764699568512E-5 0.0 0.0 0.015134276452783204 0.0 2 5.366764699568512E-5 0.0 0.0 0.04159242642165597 0.0 3 5.366764699568512E-5 0.0 0.0 0.0641865058068394 0.0 4 5.366764699568512E-5 0.0 0.0 0.1110920292810682 0.0 5 5.366764699568512E-5 0.0 0.0 0.18923212330678574 0.0 6 5.366764699568512E-5 0.0 0.0 0.3429899319494236 0.0 7 5.366764699568512E-5 0.0 0.0 0.4151729171586201 0.0 8 5.366764699568512E-5 0.0 0.0 0.5695210699182105 0.0 9 5.366764699568512E-5 0.0 0.0 0.6453534551231136 0.0 10 5.366764699568512E-5 0.0 0.0 0.7588605285189877 0.0 11 5.366764699568512E-5 0.0 0.0 0.8822424489620677 0.0 12 5.366764699568512E-5 0.0 0.0 0.9835132988429255 0.0 13 5.366764699568512E-5 0.0 0.0 1.0387373076014854 0.0 14 5.366764699568512E-5 0.0 0.0 1.07276259579675 0.0 15 5.366764699568512E-5 0.0 0.0 1.1050168516411567 0.0 16 5.366764699568512E-5 0.0 0.0 1.1595968486357684 0.0 17 5.366764699568512E-5 0.0 0.0 1.2220123220917503 0.0 18 5.366764699568512E-5 0.0 0.0 1.2956443337698302 0.0 19 5.366764699568512E-5 0.0 0.0 1.3472726101796793 0.0 20 5.366764699568512E-5 0.0 0.0 1.3998669042354508 0.0 21 5.366764699568512E-5 0.0 0.0 1.4706545306227594 0.0 22 5.366764699568512E-5 0.0 0.0 1.554054054054054 0.0 23 5.366764699568512E-5 0.0 0.0 1.6424446686559475 0.0 24 5.366764699568512E-5 0.0 0.0 1.7144666509241568 0.0 25 5.366764699568512E-5 0.0 0.0 1.778706824377992 0.0 26 5.366764699568512E-5 0.0 0.0 1.8423566537148746 0.0 27 5.366764699568512E-5 0.0 0.0 1.9068651654036881 0.0 28 5.366764699568512E-5 0.0 0.0 1.976257432969109 0.0 29 5.366764699568512E-5 0.0 0.0 2.052250821114999 0.0 30 5.366764699568512E-5 0.0 0.0 2.1443981710065905 0.0 31 5.366764699568512E-5 0.0 0.0 2.2299444003177125 0.0 32 5.366764699568512E-5 0.0 0.0 2.3154369619818387 0.0 33 5.366764699568512E-5 0.0 0.0 2.3979241354142067 0.0 34 5.366764699568512E-5 0.0 0.0 2.4823970117854155 0.0 35 5.366764699568512E-5 0.0 0.0 2.5825408410793638 0.0 36 5.366764699568512E-5 0.0 0.0 2.676405555674817 0.0 37 5.366764699568512E-5 0.0 0.0 2.7777837408496664 0.0 38 5.366764699568512E-5 0.0 0.0 2.8949938818882424 0.0 39 5.366764699568512E-5 0.0 0.0 3.0635639611016896 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTACGCG 55 1.8189894E-12 45.0 1 TAATACG 60 3.6379788E-12 41.250004 1 TACGATC 50 1.0822987E-9 40.5 11 CGTTTTT 7205 0.0 40.471897 1 TATAGCG 145 0.0 40.344826 1 GACCGAT 1070 0.0 39.11215 9 CGTAAGG 365 0.0 38.835617 2 GCGATAA 180 0.0 38.75 9 GGGCGAT 3495 0.0 38.3691 7 ACGTAGG 330 0.0 38.18182 2 GCGTAAG 190 0.0 37.894737 1 GTACGGG 655 0.0 37.78626 3 AGGGCGA 1945 0.0 37.24936 6 TAAGGGA 2475 0.0 37.18182 4 TTAGGGA 2375 0.0 36.94737 4 GGCACCG 1005 0.0 36.9403 8 TAGGGAC 1995 0.0 36.654137 5 CGTTAGG 295 0.0 36.61017 2 ATAGGGA 2455 0.0 36.56823 4 CATACGA 555 0.0 36.48649 18 >>END_MODULE