##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547381_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3762388 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.277074028515933 31.0 31.0 33.0 30.0 34.0 2 31.681999836274198 31.0 31.0 34.0 30.0 34.0 3 31.716834095792354 31.0 31.0 34.0 30.0 34.0 4 35.53497805117388 37.0 35.0 37.0 33.0 37.0 5 35.451684940521815 37.0 35.0 37.0 33.0 37.0 6 35.49305733486286 37.0 35.0 37.0 33.0 37.0 7 35.92562622462117 37.0 35.0 37.0 35.0 37.0 8 35.92906978227658 37.0 35.0 37.0 35.0 37.0 9 37.681150375771985 39.0 37.0 39.0 35.0 39.0 10 36.813251849623164 39.0 37.0 39.0 32.0 39.0 11 36.60712425193786 39.0 35.0 39.0 32.0 39.0 12 36.20875624736205 38.0 35.0 39.0 32.0 39.0 13 35.996600829047935 38.0 35.0 39.0 31.0 39.0 14 37.06180755413849 39.0 35.0 41.0 31.0 41.0 15 37.248101737513515 39.0 35.0 41.0 32.0 41.0 16 37.351054968280785 39.0 35.0 41.0 32.0 41.0 17 37.2966456410131 39.0 35.0 41.0 32.0 41.0 18 37.12203393164129 39.0 35.0 41.0 32.0 41.0 19 37.003132584943394 38.0 35.0 41.0 32.0 41.0 20 36.795525873461216 38.0 35.0 40.0 31.0 41.0 21 36.68223027502746 38.0 35.0 40.0 31.0 41.0 22 36.56921960201872 38.0 35.0 40.0 31.0 41.0 23 36.48044566376461 38.0 35.0 40.0 31.0 41.0 24 36.36881204171393 38.0 35.0 40.0 31.0 41.0 25 36.26598080793369 38.0 35.0 40.0 30.0 41.0 26 36.05266229851892 38.0 35.0 40.0 30.0 41.0 27 36.02570495121715 38.0 35.0 40.0 30.0 41.0 28 36.0659102676279 38.0 35.0 40.0 30.0 41.0 29 36.07540264321489 38.0 35.0 40.0 30.0 41.0 30 36.03706422623079 38.0 35.0 40.0 30.0 41.0 31 35.917486447437106 38.0 35.0 40.0 30.0 41.0 32 35.69457748642618 38.0 34.0 40.0 29.0 41.0 33 35.422819496553785 38.0 34.0 40.0 27.0 41.0 34 35.14440801958756 38.0 34.0 40.0 25.0 41.0 35 34.942244925297445 38.0 34.0 40.0 24.0 41.0 36 34.67955351760637 38.0 34.0 40.0 23.0 41.0 37 34.617551671970034 38.0 34.0 40.0 23.0 41.0 38 34.54533291090658 37.0 33.0 40.0 23.0 41.0 39 34.419261649782 37.0 33.0 40.0 23.0 41.0 40 34.31650776049679 37.0 33.0 40.0 23.0 41.0 41 34.30925066739528 37.0 33.0 40.0 23.0 41.0 42 34.211841521927035 37.0 33.0 40.0 22.0 41.0 43 34.09879922006981 37.0 33.0 40.0 22.0 41.0 44 34.00545743820148 37.0 33.0 40.0 21.0 41.0 45 33.852410490358785 36.0 33.0 40.0 21.0 41.0 46 33.75894963517851 36.0 33.0 40.0 20.0 41.0 47 33.73226259492641 36.0 33.0 40.0 20.0 41.0 48 33.629258066951095 36.0 33.0 40.0 20.0 41.0 49 33.51593137124613 36.0 33.0 40.0 20.0 41.0 50 33.3905984709711 36.0 32.0 40.0 20.0 41.0 51 32.91630554849739 35.0 31.0 39.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 3.0 12 9.0 13 16.0 14 45.0 15 128.0 16 398.0 17 887.0 18 2205.0 19 4140.0 20 7135.0 21 11234.0 22 16925.0 23 25249.0 24 37055.0 25 54215.0 26 74444.0 27 85662.0 28 89766.0 29 95152.0 30 106662.0 31 125028.0 32 150767.0 33 190465.0 34 293454.0 35 398592.0 36 301745.0 37 360784.0 38 518892.0 39 811116.0 40 214.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.451720556199945 25.013528641915723 28.512636123653383 17.022114678230952 2 33.25055789036112 24.86840804297696 29.125890259058874 12.755143807603044 3 27.13263491165717 24.685359404718493 35.0796887508678 13.102316932756535 4 23.86681012165678 27.584183236816617 34.82128903239113 13.727717609135476 5 22.176341196070158 31.931608329603435 32.91337841817484 12.978672056151572 6 20.8966486178459 40.5253259366126 29.29455973174484 9.283465713796662 7 87.22186547479951 2.670245599337442 9.064881134003192 1.0430077918598508 8 87.53254581930412 2.2989654442869796 8.933209440387328 1.2352792960215693 9 83.20069594098216 4.15948594350184 10.667241124519853 1.972576990996144 10 37.97000734639809 24.694183587657626 24.367954607552438 12.96785445839185 11 32.77551384918302 23.584409688740234 25.980467724221956 17.659608737854786 12 30.867815865880928 22.885119769678195 28.430906116009304 17.81615824843158 13 22.616965608012784 29.35159797447791 30.078397018064056 17.953039399445245 14 19.25984241922949 31.48394051862806 31.300599512862576 17.95561754927987 15 18.720078843542982 25.665455024840604 38.945823769372005 16.668642362244405 16 20.188348463794803 23.663109705857025 38.350722998265994 17.797818832082175 17 20.684310071156936 23.814449759036016 31.164887831876985 24.33635233793006 18 21.68226668807151 25.38898167865728 34.292077265821604 18.63667436744961 19 24.795103535307895 26.60531024445113 29.872012136972582 18.72757408326839 20 26.202348083185466 26.20979016518233 30.261791181558095 17.326070570074112 21 23.35216357270967 27.538441011400206 31.40975890843794 17.699636507452183 22 23.429242279105715 24.647803469498626 30.798391872395936 21.12456237899972 23 20.837005646413925 28.452169207428902 30.154013886925007 20.55681125923217 24 20.983056505602292 26.170719234698815 35.37862123736308 17.467603022335815 25 19.981086480182267 27.349252655494325 33.39145244988024 19.278208414443167 26 19.451635503834268 30.929930671690425 30.17094462346786 19.447489201007446 27 19.145898828084718 30.637137902842554 31.36377747324306 18.85318579582967 28 17.845049473897962 28.63327758859533 35.24532823302648 18.27634470448024 29 18.673592409926886 26.704024146366617 34.722734603661294 19.899648840045206 30 19.86445842374577 29.489356228012635 32.420579695661374 18.225605652580224 31 23.73458027189115 27.438212114221074 29.87286266062937 18.95434495325841 32 24.317853448395006 27.379260193260237 30.195264284279027 18.107622074065727 33 23.443648023542497 28.810478876713407 28.97282257970204 18.77305052004206 34 20.13532362956718 28.689943727228556 30.396413129108428 20.778319514095838 35 20.165543798247285 28.778318450941264 30.917730972988434 20.138406777823022 36 24.029579086473802 28.808857565992664 28.009179276565842 19.152384070967692 37 20.99945566485966 30.928734622798075 29.538128443956342 18.53368126838593 38 21.03379555750231 31.103065393574507 27.735310659081414 20.12782838984177 39 20.357895039001825 31.122228754716417 28.50859613628366 20.011280069998097 40 22.388095007745083 28.72050942114423 28.030442367985437 20.86095320312525 41 18.770472370207433 28.30061652333571 29.315370982471773 23.613540123985086 42 20.627298407288137 28.851197696781938 27.849147934769086 22.672355961160836 43 20.72808546061703 28.24240881057456 29.121292115539386 21.90821361326902 44 20.404886471039138 29.929635114719694 28.831316706304612 20.834161707936556 45 19.61318184089467 32.33241760286286 27.218750431906546 20.835650124335928 46 21.20924264057827 31.505868081654526 27.55736516276365 19.727524115003554 47 20.767103233371998 29.01324903226355 28.895265453749055 21.3243822806154 48 20.994458838376055 28.092955856759062 30.577760720053327 20.33482458481156 49 21.091019852285303 27.28248654843679 30.401755480827603 21.224738118450304 50 19.700094727072273 30.530955340065937 29.26146904572309 20.5074808871387 51 19.403527759497425 31.139823962866135 27.64122147954969 21.815426798086747 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1888.0 1 3106.0 2 4324.0 3 41609.0 4 78894.0 5 53003.5 6 27113.0 7 27451.0 8 27789.0 9 29940.5 10 32092.0 11 34061.0 12 36030.0 13 35720.0 14 35410.0 15 33242.0 16 31074.0 17 29140.0 18 27206.0 19 26233.5 20 25261.0 21 25857.0 22 26453.0 23 25748.5 24 25044.0 25 28965.5 26 37079.5 27 41272.0 28 49361.0 29 57450.0 30 65210.0 31 72970.0 32 82810.0 33 92650.0 34 106151.5 35 119653.0 36 125084.5 37 130516.0 38 145617.5 39 160719.0 40 192043.5 41 223368.0 42 250723.0 43 278078.0 44 286055.0 45 294032.0 46 291368.0 47 288704.0 48 282759.0 49 276814.0 50 268406.5 51 259999.0 52 246779.5 53 233560.0 54 212072.5 55 190585.0 56 177557.0 57 164529.0 58 150817.0 59 137105.0 60 121366.5 61 105628.0 62 92654.5 63 79681.0 64 66787.5 65 53894.0 66 43558.0 67 33222.0 68 26914.0 69 20606.0 70 16836.5 71 13067.0 72 11159.0 73 9251.0 74 7722.0 75 4943.0 76 3693.0 77 2847.5 78 2002.0 79 1519.0 80 1036.0 81 685.5 82 335.0 83 233.5 84 132.0 85 122.0 86 112.0 87 72.0 88 32.0 89 27.0 90 22.0 91 13.0 92 4.0 93 5.5 94 7.0 95 4.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3762388.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.27310837493886 #Duplication Level Percentage of deduplicated Percentage of total 1 80.74671955302547 17.17733715972306 2 7.23188796768885 3.0768947298412255 3 2.47641796983866 1.580433235620717 4 1.3147500042498061 1.1187527730542983 5 0.8856596577469903 0.9420366941281493 6 0.5879279481800664 0.7504232974973996 7 0.4517959312040849 0.6727772665502644 8 0.35289051287435 0.6005662499891046 9 0.30202098526955956 0.5782432636030639 >10 3.3280746310556504 16.94186091387092 >50 1.2566507070783208 19.308614014571233 >100 1.060153910595977 34.97591202116639 >500 0.00454519907298536 0.6616854069707958 >1k 3.787665894154466E-4 0.1565043378153445 >5k 0.0 0.0 >10k+ 1.2625552980514887E-4 1.4579586355981373 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 54283 1.442780489412575 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.6578864274498007E-5 0.0 0.0 0.029582275937516278 0.0 2 2.6578864274498007E-5 0.0 0.0 0.08683314958478498 0.0 3 2.6578864274498007E-5 0.0 0.0 0.13624325827107678 0.0 4 2.6578864274498007E-5 0.0 0.0 0.2212956239494704 0.0 5 2.6578864274498007E-5 0.0 0.0 0.3746822496775984 0.0 6 2.6578864274498007E-5 0.0 0.0 0.6600595153928834 0.0 7 2.6578864274498007E-5 0.0 0.0 0.8124361442785805 0.0 8 2.6578864274498007E-5 0.0 0.0 1.1297877837160868 0.0 9 2.6578864274498007E-5 0.0 0.0 1.26541972810885 0.0 10 2.6578864274498007E-5 0.0 0.0 1.4959382179615712 0.0 11 2.6578864274498007E-5 0.0 0.0 1.7677868417611369 0.0 12 2.6578864274498007E-5 0.0 0.0 1.9747564578666528 0.0 13 2.6578864274498007E-5 0.0 0.0 2.094547399151815 0.0 14 2.6578864274498007E-5 0.0 0.0 2.1533664257912792 0.0 15 2.6578864274498007E-5 0.0 0.0 2.2206375312700337 0.0 16 2.6578864274498007E-5 0.0 0.0 2.3484552895660946 0.0 17 2.6578864274498007E-5 0.0 0.0 2.495489566732618 0.0 18 2.6578864274498007E-5 0.0 0.0 2.652969337559018 0.0 19 2.6578864274498007E-5 0.0 0.0 2.754101916123483 0.0 20 2.6578864274498007E-5 0.0 0.0 2.859832638207436 0.0 21 2.6578864274498007E-5 0.0 0.0 3.0096842749870563 0.0 22 2.6578864274498007E-5 0.0 0.0 3.168333515841535 0.0 23 2.6578864274498007E-5 0.0 0.0 3.3471561146803572 0.0 24 2.6578864274498007E-5 0.0 0.0 3.4865091000715505 0.0 25 5.315772854899601E-5 0.0 0.0 3.6136889656250233 0.0 26 5.315772854899601E-5 0.0 0.0 3.7352341119523027 0.0 27 5.315772854899601E-5 0.0 0.0 3.8563805753154647 0.0 28 5.315772854899601E-5 0.0 0.0 3.991640415608385 0.0 29 5.315772854899601E-5 0.0 0.0 4.129372090278833 0.0 30 5.315772854899601E-5 0.0 0.0 4.290652638696487 0.0 31 5.315772854899601E-5 0.0 0.0 4.432982456886425 0.0 32 5.315772854899601E-5 0.0 0.0 4.573079650477303 0.0 33 5.315772854899601E-5 0.0 0.0 4.718120512823239 0.0 34 5.315772854899601E-5 0.0 0.0 4.863746110183214 0.0 35 5.315772854899601E-5 0.0 0.0 5.031060060791178 0.0 36 5.315772854899601E-5 0.0 0.0 5.185669314275933 0.0 37 5.315772854899601E-5 0.0 0.0 5.3555082569899755 0.0 38 5.315772854899601E-5 0.0 0.0 5.528403769095585 0.0 39 5.315772854899601E-5 0.0 0.0 5.740051265313412 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 27495 0.0 43.093292 1 GTCGATA 90 0.0 40.0 25 TAGGGTA 2610 0.0 39.74138 5 CGACGGT 120 0.0 39.375004 28 AGGGTAC 2000 0.0 38.25 6 AGGGCGA 3050 0.0 38.213116 6 GGGCGAT 6210 0.0 38.043476 7 TAAGGGT 2500 0.0 37.98 4 GACCGAT 2435 0.0 37.88501 9 TAGGGTG 2820 0.0 37.81915 5 TGCGTAG 245 0.0 37.65306 1 GGCGATA 1255 0.0 37.47012 8 ATGGGAC 2255 0.0 37.41685 5 CGTAAGG 610 0.0 37.2541 2 ATATACG 115 0.0 37.173912 1 GGGACCG 2775 0.0 37.135136 7 TAGGGCG 1395 0.0 37.096775 5 ACGGGTA 565 0.0 37.0354 5 GTTTTTT 32665 0.0 36.96158 2 CGATCGA 55 2.752131E-9 36.81818 10 >>END_MODULE