##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547379_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1861892 Sequences flagged as poor quality 0 Sequence length 51 %GC 37 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.210129266359164 31.0 31.0 33.0 30.0 34.0 2 31.579241438278913 31.0 31.0 34.0 30.0 34.0 3 31.48700998768994 31.0 31.0 34.0 30.0 34.0 4 35.35571236140442 37.0 35.0 37.0 33.0 37.0 5 35.29388063324833 37.0 35.0 37.0 33.0 37.0 6 35.35062076640321 37.0 35.0 37.0 33.0 37.0 7 35.865020097835966 37.0 35.0 37.0 35.0 37.0 8 35.88471135812389 37.0 35.0 37.0 35.0 37.0 9 37.63456312181373 39.0 37.0 39.0 35.0 39.0 10 36.83306281997022 39.0 37.0 39.0 32.0 39.0 11 36.52199321980007 39.0 35.0 39.0 32.0 39.0 12 35.895080380602096 37.0 35.0 39.0 31.0 39.0 13 35.528847000792744 37.0 35.0 39.0 30.0 39.0 14 36.63071542280648 39.0 35.0 41.0 31.0 41.0 15 36.90905433827526 39.0 35.0 41.0 31.0 41.0 16 37.0978461693804 39.0 35.0 41.0 32.0 41.0 17 37.04779654244177 38.0 35.0 41.0 32.0 41.0 18 36.82817155882296 38.0 35.0 40.0 32.0 41.0 19 36.608719517566 37.0 35.0 40.0 31.0 41.0 20 36.29334300807995 37.0 35.0 40.0 31.0 41.0 21 36.1269504353636 37.0 35.0 40.0 31.0 41.0 22 36.012925561740424 37.0 35.0 40.0 30.0 41.0 23 35.93815430755382 36.0 34.0 40.0 30.0 41.0 24 35.750499491914674 36.0 34.0 40.0 30.0 41.0 25 35.62172671669463 36.0 34.0 40.0 30.0 41.0 26 35.36339540639307 35.0 34.0 40.0 30.0 41.0 27 35.25295559570587 35.0 34.0 40.0 29.0 41.0 28 35.182243116142075 36.0 34.0 40.0 29.0 41.0 29 35.14939051244648 36.0 34.0 40.0 29.0 41.0 30 35.06106691472975 36.0 34.0 40.0 29.0 41.0 31 34.85183082584812 35.0 34.0 40.0 27.0 41.0 32 34.50032762372898 35.0 33.0 40.0 25.0 41.0 33 34.09609526223863 35.0 33.0 40.0 23.0 41.0 34 33.69752434620268 35.0 33.0 40.0 21.0 41.0 35 33.39047270196123 35.0 33.0 40.0 19.0 41.0 36 33.00127934380727 35.0 33.0 40.0 18.0 41.0 37 32.89950920891223 35.0 32.0 40.0 18.0 41.0 38 32.84650989423662 35.0 32.0 40.0 17.0 41.0 39 32.734285339858594 35.0 32.0 40.0 16.0 41.0 40 32.623550667815316 35.0 32.0 40.0 15.0 41.0 41 32.6208689870304 35.0 32.0 40.0 15.0 41.0 42 32.51315489835071 35.0 32.0 39.0 15.0 41.0 43 32.38732858833917 35.0 31.0 39.0 15.0 41.0 44 32.28061670601732 35.0 31.0 39.0 15.0 41.0 45 32.14410234320788 35.0 31.0 39.0 14.0 41.0 46 32.06473468923009 35.0 31.0 39.0 13.0 41.0 47 32.03609715278867 35.0 31.0 39.0 13.0 41.0 48 31.945002717665687 35.0 31.0 39.0 12.0 41.0 49 31.829010490404386 35.0 31.0 39.0 10.0 41.0 50 31.67171726394442 35.0 31.0 39.0 10.0 41.0 51 31.263838611476928 35.0 30.0 38.0 10.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 3.0 12 8.0 13 21.0 14 38.0 15 106.0 16 284.0 17 745.0 18 1624.0 19 3201.0 20 5390.0 21 8498.0 22 12548.0 23 18748.0 24 27600.0 25 40032.0 26 53904.0 27 56977.0 28 53779.0 29 53910.0 30 58480.0 31 67660.0 32 81674.0 33 103331.0 34 164034.0 35 248255.0 36 174002.0 37 150370.0 38 188521.0 39 288048.0 40 101.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.207328889108496 23.19124847198441 27.40040775727056 21.201014881636528 2 36.803423614259046 24.4573262036681 26.923151289118813 11.816098892954049 3 24.77533605601184 23.650781033486368 39.29997013790273 12.273912772599054 4 21.437494763391218 26.11907672410645 39.2935787897472 13.149849722755134 5 19.961791553967682 30.170278404977303 37.30382857867159 12.564101462383427 6 18.36314888296421 38.4052888137443 34.17754628087988 9.054016022411611 7 80.71757115879976 3.172901543161472 14.725558732729931 1.3839685653088363 8 81.10078350409154 2.86627795812002 14.330154488015417 1.7027840497730267 9 77.51717070592709 4.688295561718939 15.810852616585711 1.9836811157682617 10 42.237304849046026 23.054183593892663 23.50163167358794 11.20687988347337 11 34.55882510908259 25.226651169885255 27.907741157918935 12.30678256311322 12 32.678103778307225 23.81212229280753 30.38484509305588 13.12492883582936 13 17.61922818294509 40.59360048810564 29.307714948020614 12.479456380928648 14 13.967458907390975 40.778358787727754 31.07887031041543 14.175311994465844 15 12.170630734757976 30.414868316744474 44.913131373892796 12.501369574604757 16 12.7571309184421 26.806173505230163 44.93864305770689 15.498052518620845 17 13.388853918487218 28.512824589181328 32.19402629153571 25.90429520079575 18 16.445475892264426 30.255514283320405 37.0664356471804 16.23257417723477 19 21.493137088509968 33.484541530872896 28.73120460263001 16.29111677798712 20 23.597072225456685 29.810536808794495 31.205569388557446 15.386821577191373 21 16.852857201169563 35.264666264208664 31.50392181716233 16.378554717459444 22 18.89137500993613 31.760596210736175 28.89533871996872 20.452690059358975 23 15.907206218190959 36.37112141842814 28.918111254573304 18.8035611088076 24 15.23547015616373 31.237633546951166 40.16817301970254 13.358723277182566 25 13.36645734553884 34.44958139355022 36.04467928322373 16.13928197768721 26 14.449012080185103 39.35029529102655 30.53549829957914 15.665194329209212 27 14.093406062220579 38.98819050729043 31.023550238144853 15.894853192344133 28 12.700575543586845 35.30118825366885 37.46726448150591 14.530971721238394 29 12.48241036537028 31.36132493184352 37.15430325711696 19.001961445669245 30 14.324085392708064 38.01471836175245 33.00325690211892 14.657939343420564 31 20.38104250944738 34.968032517460735 28.504284888704607 16.14664008438728 32 21.803949960577736 33.48427298683275 28.941044915601978 15.770732136987537 33 19.72101496757062 35.25279661763411 27.975199420804213 17.05098899399106 34 14.351638011227289 34.59905300629682 29.673579348318807 21.375729634157086 35 15.055223396416118 33.972808304670735 32.031127476781684 18.940840822131467 36 22.423427352392082 34.47885269392639 26.685973192859734 16.41174676082179 37 15.242935680479855 38.271231628902214 31.062650250390462 15.423182440227468 38 15.244546944720746 38.69434961856005 29.091966666165387 16.969136770553824 39 15.371568275710942 40.354811127605686 28.244065713800797 16.029554882882575 40 19.71306606398223 35.20402901994316 27.097812332831335 17.985092583243283 41 14.414638443046105 33.036556363097326 29.76891248257149 22.77989271128508 42 16.863115583503234 34.62537032223136 26.704502731629976 21.807011362635425 43 16.914783456827788 35.65964083845895 27.536183623969595 19.889392080743672 44 15.8781497530469 37.812236155480555 27.76482201975195 18.544792071720593 45 14.169296607966519 42.412019601566584 23.918465732706302 19.500218057760602 46 17.22634825220797 40.31807430291338 25.62039044155085 16.835187003327796 47 16.49037645577724 35.90987017506923 28.295733587125355 19.304019782028174 48 17.527010159558127 33.02468671652276 30.787124065198196 18.661179058720915 49 16.46835584448507 33.44350800153822 30.0678557080647 20.020280445912007 50 15.67770848148013 38.16236387502605 28.702148137485956 17.457779506007867 51 13.878248577253673 38.94173238834476 26.79806347521768 20.381955559183883 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1619.0 1 1962.5 2 2306.0 3 37595.5 4 72885.0 5 45928.5 6 18972.0 7 21744.5 8 24517.0 9 30686.5 10 36856.0 11 42225.5 12 47595.0 13 48805.0 14 50015.0 15 45904.5 16 41794.0 17 37184.5 18 32575.0 19 29210.5 20 25846.0 21 24031.0 22 22216.0 23 20978.0 24 19740.0 25 19989.5 26 23021.0 27 25803.0 28 29178.5 29 32554.0 30 35743.0 31 38932.0 32 44378.0 33 49824.0 34 56027.0 35 62230.0 36 62255.0 37 62280.0 38 72406.0 39 82532.0 40 101425.0 41 120318.0 42 133893.0 43 147468.0 44 152454.0 45 157440.0 46 152086.0 47 146732.0 48 141388.0 49 136044.0 50 127381.5 51 118719.0 52 102910.0 53 87101.0 54 73929.0 55 60757.0 56 51011.5 57 41266.0 58 34798.5 59 28331.0 60 23297.0 61 18263.0 62 15143.5 63 12024.0 64 9488.0 65 6952.0 66 5307.0 67 3662.0 68 3044.5 69 2427.0 70 1692.5 71 958.0 72 798.0 73 638.0 74 560.0 75 434.5 76 387.0 77 324.0 78 261.0 79 218.5 80 176.0 81 132.5 82 89.0 83 62.0 84 35.0 85 20.5 86 6.0 87 8.5 88 11.0 89 7.5 90 4.0 91 5.0 92 6.0 93 5.0 94 4.0 95 2.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1861892.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.543968520674845 #Duplication Level Percentage of deduplicated Percentage of total 1 78.63782956099718 22.446357315232973 2 7.340071296153685 4.190295280338395 3 3.2310498688469433 2.7668095723529325 4 2.0061863312352815 2.290580779415521 5 1.4353333711198797 2.0485055280959976 6 1.0104520994557975 1.7305387751109655 7 0.7087249541457609 1.4160875946667328 8 0.5444477430666546 1.2432559391397644 9 0.42852629582910184 1.100865698858455 >10 3.368615549706249 20.004020996925938 >50 0.7801954136420428 16.220932641075144 >100 0.5039944125048903 20.00660004851866 >500 0.0030487355310650594 0.5590684564639103 >1k 0.0013338217948409635 0.587514103193225 >5k 0.0 0.0 >10k+ 1.9054597069156622E-4 3.3885672706113965 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 62302 3.3461661578652255 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 2740 0.1471621340013277 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2176 0.11687036627258723 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.0741761605936328E-4 0.0 0.0 0.06778051573345822 0.0 2 1.0741761605936328E-4 0.0 0.0 0.18406008511771896 0.0 3 1.0741761605936328E-4 0.0 0.0 0.27455942664773253 0.0 4 1.0741761605936328E-4 0.0 0.0 0.43423571291997604 0.0 5 1.0741761605936328E-4 0.0 0.0 0.7657264760791711 0.0 6 1.0741761605936328E-4 0.0 0.0 1.4673783441789319 0.0 7 1.0741761605936328E-4 0.0 0.0 1.9470517086920187 0.0 8 1.0741761605936328E-4 0.0 0.0 2.6955913662016915 0.0 9 1.0741761605936328E-4 0.0 0.0 3.0861618181935366 0.0 10 1.0741761605936328E-4 0.0 0.0 3.5076685436104778 0.0 11 1.0741761605936328E-4 0.0 0.0 3.893297785263592 0.0 12 1.0741761605936328E-4 0.0 0.0 4.173926307218679 0.0 13 1.0741761605936328E-4 0.0 0.0 4.3440221022486805 0.0 14 1.0741761605936328E-4 0.0 0.0 4.425390946413648 0.0 15 1.0741761605936328E-4 0.0 0.0 4.502839047592449 0.0 16 1.0741761605936328E-4 0.0 0.0 4.649249258281361 0.0 17 1.0741761605936328E-4 0.0 0.0 4.8268642864355185 0.0 18 1.0741761605936328E-4 0.0 0.0 5.0374565227199 0.0 19 1.0741761605936328E-4 0.0 0.0 5.160503401915901 0.0 20 1.0741761605936328E-4 0.0 0.0 5.282690940183426 0.0 21 1.0741761605936328E-4 0.0 0.0 5.462132067810592 0.0 22 1.0741761605936328E-4 0.0 0.0 5.648447922865558 0.0 23 1.0741761605936328E-4 0.0 0.0 5.886270524820988 0.0 24 1.0741761605936328E-4 0.0 0.0 6.057709040051733 0.0 25 1.0741761605936328E-4 0.0 0.0 6.219104008180926 0.0 26 1.0741761605936328E-4 0.0 0.0 6.3613786406515525 0.0 27 1.0741761605936328E-4 0.0 0.0 6.502310552921437 0.0 28 1.0741761605936328E-4 0.0 0.0 6.661718295153532 0.0 29 1.0741761605936328E-4 0.0 0.0 6.829719446670376 0.0 30 1.0741761605936328E-4 0.0 0.0 7.05164424144902 0.0 31 1.0741761605936328E-4 0.0 0.0 7.2242643504564175 0.0 32 1.0741761605936328E-4 0.0 0.0 7.399945861521506 0.0 33 1.0741761605936328E-4 0.0 0.0 7.579924077228969 0.0 34 1.0741761605936328E-4 0.0 0.0 7.759096660815987 0.0 35 1.0741761605936328E-4 0.0 0.0 7.971246452533229 0.0 36 1.0741761605936328E-4 0.0 0.0 8.148163266183001 0.0 37 1.611264240890449E-4 0.0 0.0 8.34898049940598 0.0 38 1.611264240890449E-4 0.0 0.0 8.545662154410675 0.0 39 1.611264240890449E-4 0.0 0.0 8.758563869440334 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGTTAG 30 2.166229E-6 45.000004 1 CCGGCTA 30 2.166229E-6 45.000004 34 CACGATG 30 2.166229E-6 45.000004 1 CTACGCG 30 2.166229E-6 45.000004 1 TAACGTT 20 7.034416E-4 45.0 22 GCGCATC 20 7.034416E-4 45.0 33 TCTAGCG 50 2.1827873E-11 45.0 1 TGTTCGA 20 7.034416E-4 45.0 20 ACGCTAG 20 7.034416E-4 45.0 1 TCCGTAG 25 3.891741E-5 45.0 1 ACCGTGC 20 7.034416E-4 45.0 31 CGGTCGT 25 3.891741E-5 45.0 36 GTCGGTC 25 3.891741E-5 45.0 34 AGTCGCG 20 7.034416E-4 45.0 1 AGGTCGC 20 7.034416E-4 45.0 42 CGTTTTT 22105 0.0 44.44017 1 TGTTGCG 95 0.0 42.63158 1 CGTTAGG 270 0.0 41.666664 2 ACGGGCC 120 0.0 41.250004 5 TACTCGC 60 3.6379788E-12 41.250004 45 >>END_MODULE