##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547378_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2325340 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.327339227811848 31.0 31.0 33.0 30.0 34.0 2 31.734228542922754 31.0 31.0 34.0 30.0 34.0 3 31.80817342840187 31.0 31.0 34.0 30.0 34.0 4 35.61244463175277 37.0 35.0 37.0 33.0 37.0 5 35.5273977138827 37.0 35.0 37.0 33.0 37.0 6 35.56718372367052 37.0 35.0 37.0 33.0 37.0 7 35.94450832996465 37.0 35.0 37.0 35.0 37.0 8 35.94869094412 37.0 35.0 37.0 35.0 37.0 9 37.72596136478967 39.0 37.0 39.0 35.0 39.0 10 36.886580457051444 39.0 37.0 39.0 32.0 39.0 11 36.68670904039839 39.0 35.0 39.0 32.0 39.0 12 36.20401833710339 38.0 35.0 39.0 32.0 39.0 13 35.95634530864304 38.0 35.0 39.0 31.0 39.0 14 37.03050349626291 39.0 35.0 41.0 31.0 41.0 15 37.22741964615927 39.0 35.0 41.0 32.0 41.0 16 37.345633756783954 39.0 35.0 41.0 32.0 41.0 17 37.265336251902944 39.0 35.0 41.0 32.0 41.0 18 37.12719430276863 39.0 35.0 41.0 32.0 41.0 19 37.04232499333431 38.0 35.0 41.0 32.0 41.0 20 36.869687013512 38.0 35.0 41.0 32.0 41.0 21 36.73765470855875 38.0 35.0 40.0 31.0 41.0 22 36.63940972072901 38.0 35.0 40.0 31.0 41.0 23 36.551682334626335 38.0 35.0 40.0 31.0 41.0 24 36.44306208984493 38.0 35.0 40.0 31.0 41.0 25 36.326273147152676 38.0 35.0 40.0 31.0 41.0 26 36.13675634530864 38.0 35.0 40.0 30.0 41.0 27 36.111015163373956 38.0 35.0 40.0 30.0 41.0 28 36.16984828025149 38.0 35.0 40.0 30.0 41.0 29 36.1969866772171 38.0 35.0 40.0 30.0 41.0 30 36.18005581979409 38.0 35.0 40.0 30.0 41.0 31 36.0673071464818 38.0 35.0 40.0 30.0 41.0 32 35.86715749094756 38.0 35.0 40.0 30.0 41.0 33 35.630379213362346 38.0 34.0 40.0 29.0 41.0 34 35.396400526374634 38.0 34.0 40.0 27.0 41.0 35 35.2227269990625 38.0 34.0 40.0 26.0 41.0 36 34.96514488203876 38.0 34.0 40.0 25.0 41.0 37 34.913021321613186 38.0 34.0 40.0 25.0 41.0 38 34.84911582822297 38.0 34.0 40.0 24.0 41.0 39 34.7288581454755 37.0 34.0 40.0 24.0 41.0 40 34.597222341679064 37.0 34.0 40.0 23.0 41.0 41 34.57610327952042 37.0 34.0 40.0 23.0 41.0 42 34.487530425658186 37.0 33.0 40.0 23.0 41.0 43 34.36629912184885 37.0 33.0 40.0 23.0 41.0 44 34.2805512312178 37.0 33.0 40.0 23.0 41.0 45 34.129984432384084 36.0 33.0 40.0 23.0 41.0 46 34.04335021975281 36.0 33.0 40.0 23.0 41.0 47 34.002104638461475 36.0 33.0 40.0 23.0 41.0 48 33.89698710726174 36.0 33.0 40.0 23.0 41.0 49 33.77858850748708 36.0 33.0 40.0 22.0 41.0 50 33.642205010880126 35.0 33.0 40.0 22.0 41.0 51 33.16873274445887 35.0 32.0 39.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 3.0 12 6.0 13 9.0 14 31.0 15 74.0 16 223.0 17 507.0 18 1152.0 19 2174.0 20 4015.0 21 6249.0 22 9462.0 23 13702.0 24 19871.0 25 29099.0 26 40305.0 27 47790.0 28 50656.0 29 55425.0 30 62748.0 31 75493.0 32 93383.0 33 119324.0 34 190390.0 35 262647.0 36 186387.0 37 226888.0 38 324493.0 39 502711.0 40 122.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.61924707784668 23.603086000326833 29.23017709238219 15.547489829444297 2 32.48927038626609 25.306879854128862 29.1409858343296 13.062863925275444 3 27.67642581299939 25.081321441165592 33.90656850181048 13.33568424402453 4 23.831310690049627 28.19316745078139 33.5348379161757 14.440683942993282 5 22.484625904168855 31.99175174383101 32.106831689129336 13.416790662870806 6 20.731333912460112 41.184127912477315 28.37253906955542 9.711999105507152 7 88.41051201114676 2.790860691339761 7.826898432057247 0.9717288654562343 8 89.21727575322318 2.0005676589229964 7.517997368126812 1.2641592197270077 9 85.07297857517611 3.798283261802575 9.297866118503102 1.8308720445182212 10 40.583527570161785 24.45629456337568 23.018784349815512 11.941393516647029 11 35.239663877110445 24.462272183852683 24.102840874882816 16.19522306415406 12 32.244273955636594 22.08446936792039 27.652343313235917 18.0189133632071 13 22.330626919074202 30.337542036863425 28.972924389551636 18.358906654510736 14 19.286856975754084 31.646210876689 30.219021734456035 18.84791041310088 15 18.926608581970807 24.936525411337694 38.45553768481169 17.68132832187981 16 20.94816241925912 22.934237573860166 37.76540204873266 18.352197958148057 17 21.180515537512797 23.39718062734912 30.03448958001841 25.387814255119682 18 22.286031290047905 24.814908787532143 33.10956677303104 19.789493149388907 19 25.740579872190732 26.029311842569257 28.37365718561587 19.85645109962414 20 27.31914472722269 25.195369279331192 28.885668332372898 18.59981766107322 21 23.92867279623625 27.403734507641893 30.26912193485684 18.39847076126502 22 24.42816964400905 24.17620649023369 29.187645677621337 22.20797818813593 23 21.724177969673253 27.760585548779964 29.181324021433426 21.33391246011336 24 21.34186828592808 25.406005143333875 34.67682145406693 18.57530511667111 25 20.188703587432375 26.724780032167338 32.953245546887764 20.13327083351252 26 20.306277791634773 30.450643776824034 28.776479998623856 20.466598432917337 27 19.250174168078647 31.03726766838398 29.876362166392873 19.836195997144504 28 18.079076608151926 28.204477624777454 34.31356274781322 19.4028830192574 29 18.86515520311008 25.39000748277671 34.51310346013916 21.231733853974042 30 19.807210988500607 29.253485511796125 31.43789725373494 19.50140624596833 31 24.63751537409583 27.31948876293359 28.74680691855815 19.296188944412428 32 26.285102393628456 26.524035194853223 28.53767621079068 18.653186200727635 33 24.607498258319215 27.74398582572871 27.491205587139945 20.15731032881213 34 20.31986720221559 27.655912683736574 29.793621577919787 22.23059853612805 35 20.49283115587398 27.842853088150548 30.637756199093463 21.026559556882006 36 25.460663816904194 27.523157903790413 27.57936473805981 19.43681354124558 37 21.430457481486577 30.922531758796563 28.39292318542665 19.25408757429021 38 21.788469643148957 30.34936826442585 27.327100553037404 20.53506153938779 39 21.165119939449713 30.819579072307707 27.404207556744392 20.61109343149819 40 24.025346831001055 27.64563461687323 27.155426733294917 21.173591818830793 41 19.49895499152812 27.01488814538949 28.5931519691744 24.89300489390799 42 21.444046892067398 27.461790533857418 27.254380004644478 23.839782569430707 43 21.15776617612908 27.679823165644596 28.05628424230435 23.106126415921974 44 20.93354090154558 28.834665038230966 28.43855092158566 21.79324313863779 45 19.802093457300867 32.0324769711096 25.9492375308557 22.21619204073383 46 22.081846095624726 30.78999200116972 26.661262439041174 20.46689946416438 47 20.922058709694067 28.8217206946081 28.124532326455487 22.131688269242346 48 21.611463269887416 27.489313390729958 30.097276097258895 20.801947242123735 49 21.095624725846545 27.146180773564293 30.434173067164373 21.32402143342479 50 20.78164913518023 30.341627460930443 28.416102591448993 20.46062081244033 51 19.530348250148364 31.13114641299767 27.049635752191076 22.288869584662887 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1395.0 1 2232.5 2 3070.0 3 19764.0 4 36458.0 5 24981.5 6 13505.0 7 13778.0 8 14051.0 9 15101.5 10 16152.0 11 17033.5 12 17915.0 13 17869.0 14 17823.0 15 16822.0 16 15821.0 17 14993.5 18 14166.0 19 13460.0 20 12754.0 21 13210.5 22 13667.0 23 14171.5 24 14676.0 25 15809.0 26 20785.0 27 24628.0 28 29559.5 29 34491.0 30 38099.0 31 41707.0 32 49408.5 33 57110.0 34 63434.5 35 69759.0 36 76234.5 37 82710.0 38 90332.0 39 97954.0 40 118872.5 41 139791.0 42 152701.0 43 165611.0 44 170143.0 45 174675.0 46 174398.5 47 174122.0 48 172757.5 49 171393.0 50 164456.0 51 157519.0 52 148154.5 53 138790.0 54 131459.5 55 124129.0 56 114596.0 57 105063.0 58 98389.5 59 91716.0 60 83383.5 61 75051.0 62 67712.0 63 60373.0 64 51910.5 65 43448.0 66 36557.0 67 29666.0 68 25240.0 69 20814.0 70 17603.5 71 14393.0 72 11289.0 73 8185.0 74 7022.5 75 5129.5 76 4399.0 77 3130.0 78 1861.0 79 1434.0 80 1007.0 81 700.0 82 393.0 83 274.5 84 156.0 85 115.0 86 74.0 87 55.5 88 37.0 89 30.0 90 23.0 91 19.5 92 16.0 93 16.0 94 16.0 95 10.5 96 5.0 97 2.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2325340.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.687460218652664 #Duplication Level Percentage of deduplicated Percentage of total 1 80.34797922867365 17.4254360317099 2 6.878133981762115 2.983385142160578 3 2.3572645199517064 1.5336924150388198 4 1.3461111068297256 1.167749243170247 5 0.8029552947238209 0.8707030505839695 6 0.5975433518151885 0.7775518602847363 7 0.4771206403473019 0.7243274434921135 8 0.3826397494446993 0.663878747532571 9 0.31153486792537416 0.6080760049369287 >10 3.962248820416666 21.21395687169453 >50 1.70746306920281 26.669437463913066 >100 0.8274018776512923 24.0597618143445 >500 0.0010021820348359418 0.1367117851476995 >1k 4.0087281393437675E-4 0.13453830684646423 >5k 0.0 0.0 >10k+ 2.0043640696718837E-4 1.0307938191438468 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 23713 1.0197648515915954 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.600892772669803E-5 0.0 0.0 0.017760843575563144 0.0 2 8.600892772669803E-5 0.0 0.0 0.06915117789226521 0.0 3 8.600892772669803E-5 0.0 0.0 0.10815622661632278 0.0 4 8.600892772669803E-5 0.0 0.0 0.19244497578848685 0.0 5 8.600892772669803E-5 0.0 0.0 0.3237376039632914 0.0 6 8.600892772669803E-5 0.0 0.0 0.5746256461420696 0.0 7 8.600892772669803E-5 0.0 0.0 0.6852761316624666 0.0 8 1.2901339159004704E-4 0.0 0.0 0.9367662363353316 0.0 9 1.2901339159004704E-4 0.0 0.0 1.041181074595543 0.0 10 1.2901339159004704E-4 0.0 0.0 1.2264443049188505 0.0 11 1.2901339159004704E-4 0.0 0.0 1.4778053962001256 0.0 12 1.2901339159004704E-4 0.0 0.0 1.671325483585196 0.0 13 1.2901339159004704E-4 0.0 0.0 1.7854593306785245 0.0 14 1.2901339159004704E-4 0.0 0.0 1.842440245297462 0.0 15 1.2901339159004704E-4 0.0 0.0 1.9017003965011567 0.0 16 1.2901339159004704E-4 0.0 0.0 2.013985051648361 0.0 17 1.2901339159004704E-4 0.0 0.0 2.1403321664788804 0.0 18 1.2901339159004704E-4 0.0 0.0 2.288267522168801 0.0 19 1.2901339159004704E-4 0.0 0.0 2.382146266782492 0.0 20 1.2901339159004704E-4 0.0 0.0 2.481916622945462 0.0 21 1.2901339159004704E-4 0.0 0.0 2.621724134965209 0.0 22 1.2901339159004704E-4 0.0 0.0 2.7630798076840377 0.0 23 1.2901339159004704E-4 0.0 0.0 2.941634341644663 0.0 24 1.2901339159004704E-4 0.0 0.0 3.0684115011138156 0.0 25 1.2901339159004704E-4 0.0 0.0 3.183190415165094 0.0 26 1.2901339159004704E-4 0.0 0.0 3.2917766864200506 0.0 27 1.2901339159004704E-4 0.0 0.0 3.405179457627702 0.0 28 1.2901339159004704E-4 0.0 0.0 3.522882675221688 0.0 29 1.2901339159004704E-4 0.0 0.0 3.651681044492418 0.0 30 1.2901339159004704E-4 0.0 0.0 3.7997024091100657 0.0 31 1.2901339159004704E-4 0.0 0.0 3.9356395193821117 0.0 32 1.2901339159004704E-4 0.0 0.0 4.062932732417625 0.0 33 1.2901339159004704E-4 0.0 0.0 4.196934641815821 0.0 34 1.2901339159004704E-4 0.0 0.0 4.333989868148314 0.0 35 1.2901339159004704E-4 0.0 0.0 4.49701979065427 0.0 36 1.2901339159004704E-4 0.0 0.0 4.641385775843532 0.0 37 1.7201785545339606E-4 0.0 0.0 4.7968469127095394 0.0 38 1.7201785545339606E-4 0.0 0.0 4.957124549528241 0.0 39 1.7201785545339606E-4 0.0 0.0 5.161997815373236 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGTATC 25 3.892042E-5 45.0 26 CGCGTAA 25 3.892042E-5 45.0 31 CGTTTTT 13180 0.0 42.217373 1 CGACGTC 55 6.184564E-11 40.909092 18 GCGTAAG 245 0.0 40.408165 1 TAGGGTG 1625 0.0 39.32308 5 GGGCGAT 3570 0.0 39.20168 7 GGCGATA 745 0.0 38.959732 8 TAGGGTC 1125 0.0 38.8 5 GTAGGGT 1855 0.0 38.692722 4 CGCCGAT 35 6.251046E-6 38.57143 22 ATAGGGT 1540 0.0 38.133114 4 TGCGTTG 155 0.0 37.741936 1 CGTAAGG 460 0.0 37.663044 2 CTAGGGT 755 0.0 37.549667 4 GCGTAAC 30 1.1402812E-4 37.500004 32 GGCGATT 1200 0.0 37.5 8 AGGGTAC 1320 0.0 37.329544 6 AGGGCGA 1860 0.0 37.137096 6 CACGACC 400 0.0 37.125 27 >>END_MODULE