##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547376_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 714073 Sequences flagged as poor quality 0 Sequence length 51 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.075756960422815 33.0 31.0 34.0 31.0 34.0 2 32.53988597804426 34.0 31.0 34.0 31.0 34.0 3 32.49818155846811 34.0 31.0 34.0 31.0 34.0 4 36.2286320866354 37.0 35.0 37.0 35.0 37.0 5 36.244033873287464 37.0 35.0 37.0 35.0 37.0 6 36.30470414089316 37.0 37.0 37.0 35.0 37.0 7 36.442706838096385 37.0 37.0 37.0 35.0 37.0 8 36.46496646701387 37.0 37.0 37.0 35.0 37.0 9 38.324711899203585 39.0 39.0 39.0 37.0 39.0 10 37.97860862964991 39.0 38.0 39.0 35.0 39.0 11 37.761619610319954 39.0 38.0 39.0 35.0 39.0 12 37.66788969755193 39.0 37.0 39.0 35.0 39.0 13 37.632118844992036 39.0 37.0 39.0 35.0 39.0 14 39.00177993006317 40.0 38.0 41.0 35.0 41.0 15 39.041946691724796 40.0 38.0 41.0 35.0 41.0 16 39.08356568586125 40.0 38.0 41.0 35.0 41.0 17 39.00728216862982 40.0 38.0 41.0 35.0 41.0 18 38.73389695451306 40.0 38.0 41.0 35.0 41.0 19 38.54181715314821 40.0 37.0 41.0 35.0 41.0 20 38.28400037531177 40.0 36.0 41.0 35.0 41.0 21 38.21190690587657 40.0 35.0 41.0 35.0 41.0 22 38.1504832139011 40.0 35.0 41.0 35.0 41.0 23 38.0545392417862 40.0 35.0 41.0 34.0 41.0 24 37.93898522980143 40.0 35.0 41.0 34.0 41.0 25 37.87665686841542 40.0 35.0 41.0 34.0 41.0 26 37.76712885097182 40.0 35.0 41.0 34.0 41.0 27 37.76240944553288 40.0 35.0 41.0 34.0 41.0 28 37.77589686208553 40.0 35.0 41.0 34.0 41.0 29 37.76662610125295 40.0 35.0 41.0 34.0 41.0 30 37.71379256742658 40.0 35.0 41.0 34.0 41.0 31 37.578156575028046 40.0 35.0 41.0 33.0 41.0 32 37.295909521855606 40.0 35.0 41.0 33.0 41.0 33 36.882488204987446 40.0 35.0 41.0 32.0 41.0 34 36.42318082324916 40.0 35.0 41.0 30.0 41.0 35 36.07116919418603 40.0 35.0 41.0 27.0 41.0 36 35.841719263996815 40.0 35.0 41.0 25.0 41.0 37 35.74099286767599 40.0 35.0 41.0 24.0 41.0 38 35.6332867928069 39.0 35.0 41.0 24.0 41.0 39 35.52604285556239 39.0 35.0 41.0 23.0 41.0 40 35.441048744316056 39.0 35.0 41.0 23.0 41.0 41 35.36846652933244 39.0 35.0 41.0 22.0 41.0 42 35.27829367585667 39.0 35.0 41.0 22.0 41.0 43 35.18442092055014 39.0 35.0 41.0 21.0 41.0 44 35.082092447130755 39.0 35.0 41.0 21.0 41.0 45 34.98807264803458 39.0 35.0 41.0 20.0 41.0 46 34.89695311263694 39.0 35.0 41.0 20.0 41.0 47 34.86533729744718 38.0 35.0 41.0 20.0 41.0 48 34.766983207599225 38.0 35.0 40.0 20.0 41.0 49 34.67925828311671 38.0 35.0 40.0 20.0 41.0 50 34.589920078199285 38.0 34.0 40.0 20.0 41.0 51 34.172010424704474 38.0 34.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 0.0 11 0.0 12 2.0 13 1.0 14 3.0 15 10.0 16 22.0 17 63.0 18 115.0 19 260.0 20 433.0 21 717.0 22 1200.0 23 2028.0 24 3858.0 25 7617.0 26 13753.0 27 17106.0 28 15343.0 29 12590.0 30 11222.0 31 11144.0 32 12983.0 33 17917.0 34 31589.0 35 51633.0 36 50872.0 37 68950.0 38 124277.0 39 258265.0 40 99.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.010721592890363 22.617155388874806 27.399299511394492 21.972823506840335 2 37.41578242000468 23.16765932894816 26.826108815205167 12.590449435841993 3 25.003045907071126 23.989424050482235 38.66761521581127 12.339914826635372 4 22.21691619764366 26.51745689866442 37.97426873722995 13.291358166461972 5 20.624221893279817 30.224920981468284 36.36630988708438 12.784547238167526 6 19.98605184623981 37.707629332015074 32.914141831437405 9.392176990307714 7 83.81271942784562 2.0205217113656446 13.320766924390085 0.8459919363986595 8 84.62916256461173 1.5824712599412105 13.134651499216465 0.6537146762305814 9 79.92712229702005 4.636920875036586 13.993667314126146 1.4422895138172147 10 31.115866304985623 41.15097476028362 19.335278045802042 8.397880888928723 11 21.26771352508777 25.01592974387773 37.68760336828307 16.028753362751427 12 21.93557241346473 22.88827612863111 37.62332422595449 17.552827231949674 13 20.532214493476157 24.96831556437507 37.76224559673871 16.737224345410063 14 18.00390156188513 26.908873462517136 37.15936605921243 17.9278589163853 15 17.266862071524898 26.298571714656628 39.9540383126095 16.48052790120898 16 21.126831570441677 25.445717734741407 37.88156112890419 15.545889565912729 17 20.472416685688998 25.13426498411227 36.29124753351548 18.102070796683254 18 20.396934207006847 24.82715352632014 37.6520327753605 17.123879491312515 19 21.458170243098394 26.151527925016072 35.308574893603314 17.08172693828222 20 22.858307203885317 26.558068992946097 35.254938920810616 15.328684882357965 21 22.713364039811058 25.300214403849463 36.439131573382554 15.547289982956924 22 22.233721202174006 23.49073554104412 36.37989393241307 17.895649324368797 23 19.23640860248182 26.529640526948928 36.36280884447388 17.87114202609537 24 18.503570363254177 26.64041351514481 38.33697675167665 16.519039369924364 25 19.227305891694545 27.85597550950673 36.18747663054058 16.729241968258147 26 18.9193541836759 29.252331344274324 34.37827785114408 17.450036620905706 27 17.654777592767125 28.461935964530237 36.3586075933413 17.52467884936134 28 17.199221928290246 28.0238855131058 37.42950650703779 17.347386051566158 29 18.064819703307645 26.061201025665444 37.53943924500716 18.33454002601975 30 18.52611707766573 26.768131549575465 37.23680912175646 17.468942251002346 31 19.806518381173913 27.655295747073477 35.17357469054284 17.364611181209764 32 19.94908083627304 27.35112516507416 35.00412422819515 17.69566977045764 33 19.710169688533245 28.22232460826834 33.97425753389359 18.093248169304818 34 18.706630834662562 29.254151886431778 34.04091738519731 17.998299893708346 35 19.03474854811763 29.103467012476315 33.41100979871806 18.450774640687996 36 20.606716680227372 29.96976499601581 31.472832609551126 17.95068571420569 37 19.78145091608281 30.206155393076056 31.689197042879368 18.323196647961762 38 19.552622771061223 30.389049859048022 31.4883772387417 18.569950131149056 39 19.519853012227042 30.331912843644837 31.331250446382935 18.816983697745187 40 20.68962136924376 29.53479546208861 31.350296118183994 18.425287050483636 41 18.902969304258807 29.799614325146027 31.322707902413338 19.974708468181824 42 19.837047472737382 29.765724232676494 30.66829301766066 19.72893527692547 43 19.779070207107676 30.159801588913176 30.72809082544782 19.333037378531326 44 19.435687947870875 30.96658184807436 30.878915741107704 18.718814462947066 45 19.334017670462263 30.649947554381697 30.11288761793262 19.903147157223422 46 19.689443516279148 30.8531480674945 30.590429830003373 18.866978586222977 47 19.320013500020305 30.508085307804667 31.296660145391296 18.875241046783735 48 19.67249847004438 29.837985752156992 31.566520509807823 18.922995267990807 49 19.587353113757278 29.860952591681805 31.47045190057599 19.08124239398493 50 18.873840629739536 30.738173828166026 31.674352622210893 18.71363291988354 51 18.8979278028997 30.445346624224694 31.039823659485794 19.61690191338981 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 375.0 1 530.0 2 685.0 3 13874.5 4 27064.0 5 17694.0 6 8324.0 7 8353.0 8 8382.0 9 8555.0 10 8728.0 11 9129.5 12 9531.0 13 9360.5 14 9190.0 15 8879.5 16 8569.0 17 7998.0 18 7427.0 19 7226.5 20 7026.0 21 7012.5 22 6999.0 23 7482.5 24 7966.0 25 8537.0 26 10630.5 27 12153.0 28 13680.0 29 15207.0 30 17812.5 31 20418.0 32 22661.5 33 24905.0 34 27272.0 35 29639.0 36 31228.0 37 32817.0 38 34678.0 39 36539.0 40 38536.5 41 40534.0 42 42516.0 43 44498.0 44 45086.0 45 45674.0 46 44947.5 47 44221.0 48 44187.0 49 44153.0 50 42347.5 51 40542.0 52 38201.5 53 35861.0 54 33296.5 55 30732.0 56 27744.0 57 24756.0 58 22390.0 59 20024.0 60 18068.0 61 16112.0 62 14195.0 63 12278.0 64 10281.0 65 8284.0 66 6915.0 67 5546.0 68 4379.5 69 3213.0 70 2684.5 71 2156.0 72 1908.5 73 1661.0 74 1428.5 75 1087.0 76 978.0 77 670.0 78 362.0 79 245.5 80 129.0 81 94.5 82 60.0 83 45.5 84 31.0 85 21.5 86 12.0 87 8.0 88 4.0 89 3.0 90 2.0 91 2.0 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 714073.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.021685180857176 #Duplication Level Percentage of deduplicated Percentage of total 1 63.99585663891381 23.692344573651358 2 10.35898797499951 7.6701438320543405 3 5.864309331738617 6.513198416483699 4 4.0760414808664 6.036076979550031 5 3.0710603165083175 5.684791410459726 6 2.471628232685181 5.49023053887535 7 1.9450827780170248 5.040716958091738 8 1.6243531044319228 4.8109031403861335 9 1.2741224340789021 4.245314367270291 >10 5.293074179522169 27.257528338451593 >50 0.01711580430758711 0.4404612389074098 >100 0.00760702175508294 0.4867884055775574 >500 3.803510877540848E-4 0.07674274834820428 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 3.803510877540848E-4 2.554759051892606 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 18143 2.54077664328437 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0075622520386571124 0.0 2 0.0 0.0 0.0 0.034450259287215734 0.0 3 0.0 0.0 0.0 0.05097518040872572 0.0 4 0.0 0.0 0.0 0.07702293743076688 0.0 5 0.0 0.0 0.0 0.1502647488422052 0.0 6 0.0 0.0 0.0 0.30263012325070404 0.0 7 0.0 0.0 0.0 0.38959602169526086 0.0 8 0.0 0.0 0.0 0.505830636363509 0.0 9 0.0 0.0 0.0 0.589435533901996 0.0 10 0.0 0.0 0.0 0.6827033090454337 0.0 11 0.0 0.0 0.0 0.784373586454046 0.0 12 0.0 0.0 0.0 0.8655977750174002 0.0 13 0.0 0.0 0.0 0.9253955828045592 0.0 14 0.0 0.0 0.0 0.9707690950365019 0.0 15 0.0 0.0 0.0 1.0078801467076894 0.0 16 0.0 0.0 0.0 1.051012991668919 0.0 17 0.0 0.0 0.0 1.0987672128759944 0.0 18 0.0 0.0 0.0 1.1528233107819508 0.0 19 0.0 0.0 0.0 1.19273519654153 0.0 20 0.0 0.0 0.0 1.2334873325276268 0.0 21 0.0 0.0 0.0 1.2777405111242128 0.0 22 0.0 0.0 0.0 1.3386586525467283 0.0 23 0.0 0.0 0.0 1.40755917112116 0.0 24 0.0 0.0 0.0 1.46035489368734 0.0 25 0.0 0.0 0.0 1.5144109915932964 0.0 26 0.0 0.0 0.0 1.5618851293915328 0.0 27 0.0 0.0 0.0 1.6198623950212374 0.0 28 0.0 0.0 0.0 1.6757390350846482 0.0 29 0.0 0.0 0.0 1.742538928092786 0.0 30 0.0 0.0 0.0 1.8174612399572592 0.0 31 0.0 0.0 0.0 1.8911231764819563 0.0 32 0.0 0.0 0.0 1.9625444457359402 0.0 33 0.0 0.0 0.0 2.035646215442959 0.0 34 0.0 0.0 0.0 2.1147697784400195 0.0 35 0.0 0.0 0.0 2.198234634274087 0.0 36 0.0 0.0 0.0 2.269235778414812 0.0 37 0.0 0.0 0.0 2.3529807176577187 0.0 38 0.0 0.0 0.0 2.4412069914420513 0.0 39 0.0 0.0 0.0 2.5581418146323975 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGACGCG 20 7.0314895E-4 45.0 1 CATAGCG 20 7.0314895E-4 45.0 1 GAACGTA 20 7.0314895E-4 45.0 40 CAATGCG 20 7.0314895E-4 45.0 1 CGTTTTT 8405 0.0 44.089825 1 AGTAGCG 60 3.6379788E-12 41.250004 1 TCGTAAG 50 1.0804797E-9 40.5 1 TATTGCG 45 1.9264917E-8 40.0 1 TTAGCGG 130 0.0 39.807693 2 AGTACGG 85 0.0 39.705883 2 TTTAGCG 40 3.4557706E-7 39.375 1 GCGAGAC 325 0.0 38.76923 21 TAGGGAT 1505 0.0 38.72093 5 ACACGAC 315 0.0 38.57143 26 GTTAGCG 35 6.2449653E-6 38.57143 1 TAATCGT 35 6.2449653E-6 38.57143 21 AGCACGG 70 0.0 38.57143 2 GTAGCGG 170 0.0 38.38235 2 ACGGGAC 270 0.0 38.333336 5 ACGCCGG 100 0.0 38.25 27 >>END_MODULE