##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547375_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1311318 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.34033087321306 31.0 31.0 33.0 30.0 34.0 2 31.709339763505113 31.0 31.0 34.0 30.0 34.0 3 31.717229535474996 31.0 31.0 34.0 30.0 34.0 4 35.52435793606128 37.0 35.0 37.0 33.0 37.0 5 35.4376772072068 37.0 35.0 37.0 33.0 37.0 6 35.47716800959035 37.0 35.0 37.0 33.0 37.0 7 35.9083395484543 37.0 35.0 37.0 35.0 37.0 8 35.92077894149245 37.0 35.0 37.0 35.0 37.0 9 37.704582717540674 39.0 37.0 39.0 35.0 39.0 10 37.04828119495043 39.0 37.0 39.0 33.0 39.0 11 36.640357258879995 39.0 35.0 39.0 32.0 39.0 12 35.595256833201404 37.0 35.0 39.0 31.0 39.0 13 34.920648538340814 37.0 34.0 39.0 27.0 39.0 14 35.932535052519675 38.0 35.0 40.0 29.0 41.0 15 36.38256547992173 38.0 35.0 41.0 31.0 41.0 16 36.66011371764896 38.0 35.0 41.0 32.0 41.0 17 36.618577644781816 38.0 35.0 40.0 32.0 41.0 18 36.485491696140826 38.0 35.0 40.0 31.0 41.0 19 36.32142546659163 37.0 35.0 40.0 31.0 41.0 20 36.044208956179965 36.0 35.0 40.0 31.0 41.0 21 35.8490976254425 36.0 34.0 40.0 31.0 41.0 22 35.707941933230536 35.0 34.0 40.0 30.0 41.0 23 35.71860143763755 35.0 34.0 40.0 30.0 41.0 24 35.56750917778906 35.0 34.0 40.0 30.0 41.0 25 35.47761717600155 35.0 34.0 40.0 30.0 41.0 26 35.23653301487511 35.0 34.0 40.0 30.0 41.0 27 35.13595100501938 35.0 34.0 40.0 29.0 41.0 28 35.18217854097938 35.0 34.0 40.0 29.0 41.0 29 35.264379044594826 36.0 34.0 40.0 30.0 41.0 30 35.242732121422875 36.0 34.0 40.0 29.0 41.0 31 35.00797289444666 35.0 34.0 40.0 29.0 41.0 32 34.678020129366026 35.0 34.0 40.0 27.0 41.0 33 34.37760863497641 35.0 33.0 40.0 25.0 41.0 34 34.080650917626386 35.0 33.0 40.0 23.0 41.0 35 33.845540898546346 35.0 33.0 40.0 23.0 41.0 36 33.451021033799584 35.0 33.0 40.0 21.0 41.0 37 33.31699709757664 35.0 33.0 40.0 21.0 41.0 38 33.303590738478384 35.0 33.0 40.0 21.0 41.0 39 33.241301499712506 35.0 33.0 40.0 20.0 41.0 40 33.04098395659939 35.0 32.0 39.0 18.0 41.0 41 33.07024764397347 35.0 33.0 39.0 18.0 41.0 42 32.98689257678153 35.0 32.0 39.0 18.0 41.0 43 32.84515350204909 35.0 32.0 39.0 18.0 41.0 44 32.703622614804345 35.0 32.0 39.0 18.0 41.0 45 32.53039537320467 35.0 32.0 39.0 18.0 41.0 46 32.466382677580874 35.0 32.0 39.0 18.0 41.0 47 32.44852964727092 35.0 32.0 39.0 18.0 41.0 48 32.38651951700503 35.0 32.0 39.0 18.0 41.0 49 32.31878079916542 35.0 31.0 38.0 17.0 41.0 50 32.11562641556053 35.0 31.0 38.0 15.0 40.0 51 31.610966218720403 35.0 30.0 38.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 5.0 12 3.0 13 8.0 14 19.0 15 64.0 16 209.0 17 418.0 18 993.0 19 1889.0 20 3383.0 21 5338.0 22 7901.0 23 11556.0 24 16616.0 25 23786.0 26 31804.0 27 35987.0 28 36604.0 29 38060.0 30 42162.0 31 48873.0 32 59408.0 33 77116.0 34 137109.0 35 211641.0 36 87870.0 37 95583.0 38 132288.0 39 204561.0 40 64.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.256276509588066 23.806734903356773 28.25668525864817 17.680303328406993 2 32.765507680059294 26.095195825879003 29.619665100303667 11.519631393758036 3 27.031963261390445 24.960002074248962 35.15585083099599 12.8521838333646 4 23.398748434780885 28.511543347990344 34.08723131993918 14.002476897289599 5 21.19684165091915 31.241697284716597 34.434973057641244 13.126488006723008 6 19.81990638426377 40.250191029178275 30.62384562707139 9.306056959486563 7 84.89001142362113 4.039981148737377 9.953420909344644 1.1165865182968586 8 85.55674519834243 3.2623665655470298 9.536588379020191 1.6442998570903473 9 82.50653159645486 4.906208867719348 10.907346654282179 1.6799128815436073 10 51.91852777129575 23.625695674123286 15.291332842224387 9.164443712356576 11 45.82984447708336 19.98554126459028 23.022104478089982 11.162509780236372 12 43.79273372286509 21.009396652833257 23.4541888390154 11.743680785286253 13 19.871381312542038 43.263876496776525 24.528756564006596 12.335985626674843 14 13.916685350159153 44.93196920960438 26.910711208112755 14.24063423212371 15 12.310591328724229 25.14355785553161 49.287205696863765 13.258645118880393 16 13.689890629122761 20.64495416062313 49.58118473169742 16.08397047855669 17 14.695825116409598 21.431567323868048 29.2026037925202 34.670003767202154 18 18.96908301418878 25.523099660036696 37.033351177975135 18.47446614779939 19 26.20111978940272 26.97858185428706 26.985597696363506 19.834700659946712 20 29.715980410548777 24.4342714734336 28.348196242253977 17.50155187376365 21 20.31406569573513 30.82997411764347 30.78116825972037 18.074791926901028 22 22.027685122906878 26.96706672218333 26.446674262078307 24.558573892831486 23 18.041924231955942 32.26219727022736 25.446840507031855 24.249037990784846 24 18.211600847391708 24.751357031627723 42.239868590227545 14.79717353075303 25 14.971349436216084 26.707709342813875 38.74170872358955 19.5792324973805 26 15.604147887850239 36.85528605570884 28.5391491613781 19.00141689506283 27 15.880282280880762 38.77846563533788 28.49049582176101 16.85075626202035 28 13.751050469832643 32.49776179385931 38.69663956416369 15.054548172144361 29 13.318584813142198 26.450410960575542 38.452228978783175 21.77877524749908 30 16.454513703007205 34.68929733291238 33.041642073089825 15.814546890990592 31 26.955704108385607 30.18169505794933 26.528576592405507 16.334024241259556 32 28.111792867938973 28.118656191709412 28.515508823946593 15.254042116405023 33 26.94876452546217 30.407117114231635 25.379351156622576 17.264767203683622 34 18.62972978331724 30.381341520516 27.854875781465672 23.134052914701087 35 19.08713218304027 28.365430810833068 30.82372086709707 21.723716139029587 36 31.0416695263849 27.077489975734338 25.52759895006398 16.353241547816776 37 19.551245388227724 35.13777741173384 30.20861453896004 15.102362661078397 38 18.56529079902815 35.3514555584534 25.671652490090125 20.41160115242832 39 19.275492290962223 35.761195987548405 27.820787940072506 17.142523781416866 40 24.982574783538393 28.35925381943968 25.17795073353679 21.480220663485134 41 16.192029698364546 26.647998426011082 29.578256380222033 27.581715495402335 42 20.278147634669853 27.473656275594475 25.640081200746117 26.608114888989554 43 21.003829734663903 28.061919381873807 26.87250537245733 24.061745511004958 44 18.217244024714066 32.96576421585001 27.801570633515286 21.01542112592064 45 16.573020426776726 40.48468792466816 21.81027027769008 21.132021370865036 46 22.048808908289217 35.83074433508882 24.699577066737437 17.420869689884526 47 20.01940032852443 30.41954735617142 27.179219685842792 22.38183262946135 48 21.449030669906154 27.650730028871717 31.851694249602307 19.04854505161982 49 21.662175002554683 25.244372455804008 31.98362258430068 21.10982995734063 50 19.66845570639616 35.037801662144496 26.692304993906895 18.601437637552447 51 16.998775278002743 35.83112563085385 24.16942343504779 23.000675656095623 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1262.0 1 1648.5 2 2035.0 3 13610.5 4 25186.0 5 17100.0 6 9014.0 7 10057.5 8 11101.0 9 12539.5 10 13978.0 11 14927.0 12 15876.0 13 15640.5 14 15405.0 15 14595.5 16 13786.0 17 12828.5 18 11871.0 19 11060.5 20 10250.0 21 10300.5 22 10351.0 23 9843.5 24 9336.0 25 8960.0 26 10063.5 27 11543.0 28 13098.0 29 14653.0 30 17208.0 31 19763.0 32 22517.5 33 25272.0 34 29547.5 35 33823.0 36 36211.0 37 38599.0 38 44079.0 39 49559.0 40 70902.0 41 92245.0 42 113681.0 43 135117.0 44 132730.5 45 130344.0 46 127175.5 47 124007.0 48 113438.0 49 102869.0 50 97494.5 51 92120.0 52 80910.5 53 69701.0 54 63199.5 55 56698.0 56 48026.0 57 39354.0 58 36783.0 59 34212.0 60 31175.0 61 28138.0 62 24830.0 63 21522.0 64 16525.0 65 11528.0 66 9514.5 67 7501.0 68 6442.0 69 5383.0 70 4351.5 71 3320.0 72 2756.0 73 2192.0 74 1965.0 75 1338.0 76 938.0 77 688.0 78 438.0 79 432.0 80 426.0 81 295.0 82 164.0 83 103.0 84 42.0 85 33.5 86 25.0 87 30.5 88 36.0 89 21.0 90 6.0 91 4.0 92 2.0 93 1.5 94 1.0 95 2.0 96 3.0 97 2.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1311318.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.87783221391269 #Duplication Level Percentage of deduplicated Percentage of total 1 83.08236296489909 19.838267228112542 2 6.91377371715988 3.3017185756660608 3 2.3318540085390516 1.670388562897056 4 1.164992285078711 1.1126996125444881 5 0.7403903545345263 0.8839458329187375 6 0.4977701105967917 0.7131402709158573 7 0.37932419859711813 0.6340207698145217 8 0.29287444785216316 0.559456554044502 9 0.2374084960379367 0.5101920211096088 >10 2.2871163976283757 12.813529783974134 >50 1.029467380296596 17.981737415781026 >100 1.039124631670554 37.74382246434766 >500 0.0025752778975725917 0.40200430003367654 >1k 6.438194743931479E-4 0.3483524833179009 >5k 0.0 0.0 >10k+ 3.2190973719657397E-4 1.4867241245222507 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 19342 1.475004537419604 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3216 0.24524943606356353 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 1316 0.10035704535436867 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.052313778961319835 0.0 2 0.0 0.0 0.0 0.1838608178946678 0.0 3 0.0 0.0 0.0 0.25150268660996034 0.0 4 0.0 0.0 0.0 0.4199591555976506 0.0 5 0.0 0.0 0.0 0.6720719154316497 0.0 6 0.0 0.0 0.0 1.060841077450321 0.0 7 0.0 0.0 0.0 1.2349407237603693 0.0 8 0.0 0.0 0.0 1.6622207580464845 0.0 9 0.0 0.0 0.0 1.8208397962965506 0.0 10 0.0 0.0 0.0 2.1157339409662645 0.0 11 0.0 0.0 0.0 2.5239491870011697 0.0 12 0.0 0.0 0.0 2.8099972699223223 0.0 13 0.0 0.0 0.0 2.952220590276348 0.0 14 0.0 0.0 0.0 3.017345906942481 0.0 15 0.0 0.0 0.0 3.089792102297078 0.0 16 0.0 0.0 0.0 3.2509276925963038 0.0 17 0.0 0.0 0.0 3.428840296556594 0.0 18 0.0 0.0 0.0 3.625055097238046 0.0 19 0.0 0.0 0.0 3.744629449149634 0.0 20 0.0 0.0 0.0 3.8609246574820144 0.0 21 0.0 0.0 0.0 4.025720687125472 0.0 22 0.0 0.0 0.0 4.1979138546104 0.0 23 0.0 0.0 0.0 4.382384745729106 0.0 24 0.0 0.0 0.0 4.531242612394553 0.0 25 0.0 0.0 0.0 4.659129211983668 0.0 26 0.0 0.0 0.0 4.7825165215454986 0.0 27 0.0 0.0 0.0 4.894922513074632 0.0 28 0.0 0.0 0.0 5.011599017172036 0.0 29 0.0 0.0 0.0 5.14009568998519 0.0 30 0.0 0.0 0.0 5.305044237934658 0.0 31 7.62591530048394E-5 0.0 0.0 5.461604279053593 0.0 32 7.62591530048394E-5 0.0 0.0 5.595896647495116 0.0 33 7.62591530048394E-5 0.0 0.0 5.725384689297333 0.0 34 7.62591530048394E-5 0.0 0.0 5.869819525088499 0.0 35 7.62591530048394E-5 0.0 0.0 6.067330731371033 0.0 36 7.62591530048394E-5 0.0 0.0 6.227093656916171 0.0 37 7.62591530048394E-5 0.0 0.0 6.382662329046044 0.0 38 7.62591530048394E-5 0.0 0.0 6.533884229454641 0.0 39 7.62591530048394E-5 0.0 0.0 6.697536371803026 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTGG 135 0.0 45.000004 2 GGTCGTA 35 1.2121018E-7 45.0 8 GATCGGT 20 7.0336513E-4 45.0 9 GATCGAC 20 7.0336513E-4 45.0 40 GCGAATC 25 3.891108E-5 45.0 44 TTAGCGA 40 6.8157533E-9 45.0 27 CGTCTTA 20 7.0336513E-4 45.0 38 ATTAACG 45 3.8562575E-10 45.0 1 TACGGGA 285 0.0 45.0 4 TACGCCT 20 7.0336513E-4 45.0 30 GTCGTGA 25 3.891108E-5 45.0 10 GTCGTAC 25 3.891108E-5 45.0 20 CGTACTT 20 7.0336513E-4 45.0 40 TCGTATC 20 7.0336513E-4 45.0 31 GCGATAC 50 2.1827873E-11 45.0 9 ACTCGAT 25 3.891108E-5 45.0 45 TCTCCGT 20 7.0336513E-4 45.0 14 ATGCGTC 25 3.891108E-5 45.0 14 TTACGTA 25 3.891108E-5 45.0 20 CGTAAGT 40 6.8157533E-9 45.0 31 >>END_MODULE