##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547373_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3424659 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.303584094066007 31.0 31.0 33.0 30.0 34.0 2 31.7168193972013 31.0 31.0 34.0 30.0 34.0 3 31.820126616985807 31.0 31.0 34.0 30.0 34.0 4 35.60437550132728 37.0 35.0 37.0 33.0 37.0 5 35.49675485938892 37.0 35.0 37.0 33.0 37.0 6 35.53268778000963 37.0 35.0 37.0 33.0 37.0 7 35.91346291703787 37.0 35.0 37.0 35.0 37.0 8 35.90745385160975 37.0 35.0 37.0 35.0 37.0 9 37.65341804833707 39.0 37.0 39.0 35.0 39.0 10 36.95373232780256 39.0 37.0 39.0 32.0 39.0 11 36.638622998669355 39.0 35.0 39.0 32.0 39.0 12 36.24743660609713 38.0 35.0 39.0 32.0 39.0 13 36.08140226515983 38.0 35.0 39.0 31.0 39.0 14 37.12517684242431 39.0 35.0 41.0 31.0 41.0 15 37.284617534183695 39.0 35.0 41.0 32.0 41.0 16 37.3799479013823 39.0 35.0 41.0 32.0 41.0 17 37.30154768693759 39.0 35.0 41.0 32.0 41.0 18 37.16910734762205 39.0 35.0 41.0 32.0 41.0 19 37.105700742760085 39.0 35.0 41.0 32.0 41.0 20 36.96438711124232 39.0 35.0 41.0 31.0 41.0 21 36.83535879046644 39.0 35.0 41.0 31.0 41.0 22 36.74976983109851 38.0 35.0 41.0 31.0 41.0 23 36.66269809636521 38.0 35.0 40.0 31.0 41.0 24 36.54731346974984 38.0 35.0 40.0 31.0 41.0 25 36.44995983541719 38.0 35.0 40.0 30.0 41.0 26 36.220593349586046 38.0 35.0 40.0 30.0 41.0 27 36.22450147591337 38.0 35.0 40.0 30.0 41.0 28 36.266460689954826 38.0 35.0 40.0 30.0 41.0 29 36.27449331451686 38.0 35.0 40.0 30.0 41.0 30 36.248633513584856 38.0 35.0 40.0 30.0 41.0 31 36.18411584919841 38.0 35.0 40.0 30.0 41.0 32 36.02251757036248 38.0 35.0 40.0 30.0 41.0 33 35.84919024054658 38.0 35.0 40.0 29.0 41.0 34 35.636718867484326 38.0 34.0 40.0 27.0 41.0 35 35.52073242912652 38.0 34.0 40.0 27.0 41.0 36 35.29361580233244 38.0 34.0 40.0 26.0 41.0 37 35.258610565314676 38.0 34.0 40.0 26.0 41.0 38 35.17776426791689 38.0 34.0 40.0 26.0 41.0 39 35.027092040404604 38.0 34.0 40.0 25.0 41.0 40 34.89286115785542 38.0 34.0 40.0 24.0 41.0 41 34.86001029591559 38.0 34.0 40.0 24.0 41.0 42 34.77657308362672 37.0 34.0 40.0 24.0 41.0 43 34.66662899868279 37.0 33.0 40.0 24.0 41.0 44 34.56578100184573 37.0 33.0 40.0 24.0 41.0 45 34.419442928478425 37.0 33.0 40.0 23.0 41.0 46 34.34568609604635 37.0 33.0 40.0 23.0 41.0 47 34.29150814723452 37.0 33.0 40.0 23.0 41.0 48 34.172220942289435 36.0 33.0 40.0 23.0 41.0 49 34.033799569533784 36.0 33.0 40.0 23.0 41.0 50 33.92280078104127 36.0 33.0 40.0 23.0 41.0 51 33.43656463315034 35.0 32.0 39.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 4.0 11 4.0 12 9.0 13 17.0 14 56.0 15 168.0 16 394.0 17 904.0 18 1786.0 19 3438.0 20 6104.0 21 9292.0 22 13730.0 23 20061.0 24 28230.0 25 39390.0 26 53507.0 27 64060.0 28 71776.0 29 80526.0 30 94299.0 31 112420.0 32 136548.0 33 173747.0 34 262819.0 35 331551.0 36 280417.0 37 354479.0 38 500799.0 39 783881.0 40 241.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.67586641472918 23.90883296701949 28.655290935535483 14.760009682715856 2 31.162285062541994 25.617149035860216 29.815289639056036 13.40527626254176 3 28.847076453451276 25.82762254577755 31.70049923218633 13.624801768584843 4 25.57498425390674 28.17188514243316 31.550177696523946 14.702952907136154 5 22.99916575635706 32.74498278514737 30.014754753684965 14.24109670481061 6 22.304264453774813 41.388325085796865 26.555607434200017 9.751803026228306 7 89.58497765762957 2.8887255636254587 6.360458077723943 1.165838701021036 8 90.25570137055982 2.217593050870174 6.161022163082515 1.3656834154874982 9 85.3134282858527 4.8409199280862705 7.697350305534069 2.1483014805269662 10 42.0977095821803 33.24976296910145 13.875863261130524 10.776664187587729 11 31.815313583045786 24.61453826497762 26.632753801181373 16.937394350795216 12 30.478859355048193 22.296789256974197 29.00700478500195 18.217346602975653 13 24.510527909494055 26.112468423863515 30.254837050929744 19.122166615712686 14 20.443057250371496 28.425428633916543 31.10738908603747 20.024125029674487 15 19.87059149538684 25.50134188542567 36.049603770769586 18.5784628484179 16 23.563309514903526 23.964108543361544 34.12293019538588 18.349651746349053 17 24.180976850541906 23.825759002575147 29.172101514340554 22.821162632542393 18 23.857908188815294 24.752975405726527 31.48474052453106 19.904375880927123 19 26.74561175287817 25.53060027290308 28.255484706652545 19.4683032675662 20 27.78770090686401 26.15253080671682 27.94030004155158 18.119468244867594 21 26.192155189757578 25.472609097723307 30.07295032877726 18.262285383741855 22 25.437393912795404 23.329826414834294 29.895940004537678 21.33683966783262 23 23.31838001973335 25.92515050403558 29.674049299506898 21.082420176724163 24 22.482121577651963 24.844283766646548 32.954580295439634 19.719014360261856 25 23.054616532624124 26.500156657932948 29.912087597626506 20.53313921181642 26 21.433754426353104 28.592014562617766 28.301503886956336 21.67272712407279 27 21.028137399957192 28.52091259304941 30.000505159783792 20.450444847209607 28 20.413798862894087 27.490182234202003 31.384788967310325 20.711229935593586 29 21.4470696206542 25.690441004491248 31.77241880140475 21.090070573449797 30 22.003446182525032 27.109852396983175 30.73310364623164 20.153597774260152 31 24.708007424972823 26.176941996268827 28.62118535013267 20.493865228625683 32 26.1329376151027 26.000661671716806 27.961178032615802 19.905222680564695 33 25.34153035382501 26.37459671167261 28.01916920779558 20.264703726706802 34 22.113179735559076 26.869974499650912 29.69154009202084 21.325305672769172 35 22.407136009745788 26.99474604624869 29.872813614435774 20.725304329569745 36 24.983246507170495 27.51339622426642 27.4391406560478 20.06421661251529 37 22.392828015869608 29.0938163478466 27.95011123735239 20.563244398931396 38 22.95016817732802 28.889066035479736 27.382667880218147 20.778097906974097 39 22.557778745270696 28.234343915700805 27.478297839288523 21.729579499739973 40 24.11188968011122 26.44628268099101 27.906603255973806 21.535224382923964 41 20.967693425827214 26.36271231675913 28.929800018045594 23.739794239368063 42 22.207291295279326 26.690540576448633 27.828288889492352 23.273879238779685 43 22.150993719374686 26.091356832899276 28.784705280146138 22.972944167579897 44 21.515455991384837 27.340970298064715 28.62953654655836 22.514037163992093 45 21.063469384835106 28.64107054162181 27.341612697789763 22.953847375753323 46 22.01944777567635 28.83980565656318 27.51208222482881 21.62866434293166 47 21.391034844637087 27.189334762964723 29.24641548253417 22.17321490986402 48 22.27953206436028 26.788097734694173 29.78235205315332 21.15001814779223 49 22.48156677788942 26.31526233706772 29.299355059876035 21.903815825166827 50 21.242669708137367 27.913815652886903 28.941859612884084 21.90165502609165 51 20.44708684864683 28.598701359755818 28.309241883644475 22.64496990795288 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1824.0 1 3281.5 2 4739.0 3 22857.5 4 40976.0 5 28235.0 6 15494.0 7 15456.0 8 15418.0 9 16199.5 10 16981.0 11 17318.0 12 17655.0 13 17486.0 14 17317.0 15 16849.0 16 16381.0 17 15956.0 18 15531.0 19 15627.0 20 15723.0 21 16629.5 22 17536.0 23 19514.5 24 21493.0 25 24905.5 26 34529.0 27 40740.0 28 46529.0 29 52318.0 30 60375.5 31 68433.0 32 76859.5 33 85286.0 34 98078.5 35 110871.0 36 118567.5 37 126264.0 38 138819.5 39 151375.0 40 168993.0 41 186611.0 42 206691.0 43 226771.0 44 230229.5 45 233688.0 46 237559.0 47 241430.0 48 240010.0 49 238590.0 50 230377.0 51 222164.0 52 210938.5 53 199713.0 54 189175.0 55 178637.0 56 170630.0 57 162623.0 58 155930.5 59 149238.0 60 139925.5 61 130613.0 62 120330.0 63 110047.0 64 94904.5 65 79762.0 66 68762.0 67 57762.0 68 50535.0 69 43308.0 70 37667.0 71 32026.0 72 26276.0 73 20526.0 74 16800.5 75 10434.0 76 7793.0 77 6375.5 78 4958.0 79 3654.0 80 2350.0 81 1817.5 82 1285.0 83 917.5 84 550.0 85 402.0 86 254.0 87 168.5 88 83.0 89 72.5 90 62.0 91 52.0 92 42.0 93 30.5 94 19.0 95 11.0 96 3.0 97 2.5 98 2.0 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3424659.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.619262932274868 #Duplication Level Percentage of deduplicated Percentage of total 1 80.79304893410524 15.851000701383605 2 5.92045220511781 2.3230981698034574 3 1.8989844418369213 1.1177002520609336 4 1.0717456306922046 0.841074373002685 5 0.6875537533178572 0.6744648933207747 6 0.5427375055567414 0.6388865894834822 7 0.415475414714419 0.570592498222469 8 0.3396090764693793 0.5330303812351835 9 0.30586171674901147 0.5400703297634253 >10 5.150461058129052 25.608050963252616 >50 2.0147781446489126 28.092641337156227 >100 0.8570367332491428 22.15782678934108 >500 0.001954667358224329 0.2540187561062278 >1k 1.503590275557176E-4 0.059824647239975624 >5k 0.0 0.0 >10k+ 1.503590275557176E-4 0.737719318627865 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 25008 0.730233287460153 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.017549192488945615 0.0 2 0.0 0.0 0.0 0.055596776204579784 0.0 3 0.0 0.0 0.0 0.0802707656441123 0.0 4 0.0 0.0 0.0 0.1474015369121422 0.0 5 0.0 0.0 0.0 0.2504190928206283 0.0 6 0.0 0.0 0.0 0.4713461982638271 0.0 7 0.0 0.0 0.0 0.5701589559719669 0.0 8 0.0 0.0 0.0 0.7852460639146847 0.0 9 0.0 0.0 0.0 0.8789780237974059 0.0 10 0.0 0.0 0.0 1.02033516329655 0.0 11 2.9199987502405347E-5 0.0 0.0 1.1788034954721038 0.0 12 2.9199987502405347E-5 0.0 0.0 1.3013266430321968 0.0 13 2.9199987502405347E-5 0.0 0.0 1.3662090152625415 0.0 14 2.9199987502405347E-5 0.0 0.0 1.4050157986532381 0.0 15 2.9199987502405347E-5 0.0 0.0 1.4403185835436463 0.0 16 2.9199987502405347E-5 0.0 0.0 1.5049381558864692 0.0 17 2.9199987502405347E-5 0.0 0.0 1.5788433242550572 0.0 18 2.9199987502405347E-5 0.0 0.0 1.6691880855874994 0.0 19 2.9199987502405347E-5 0.0 0.0 1.7287852600799087 0.0 20 2.9199987502405347E-5 0.0 0.0 1.7915360332225778 0.0 21 2.9199987502405347E-5 0.0 0.0 1.8761575970045485 0.0 22 2.9199987502405347E-5 0.0 0.0 1.9758755543252629 0.0 23 2.9199987502405347E-5 0.0 0.0 2.076673911183566 0.0 24 2.9199987502405347E-5 0.0 0.0 2.163047474215681 0.0 25 2.9199987502405347E-5 0.0 0.0 2.242442240234721 0.0 26 2.9199987502405347E-5 0.0 0.0 2.3143618094531457 0.0 27 2.9199987502405347E-5 0.0 0.0 2.3946909750722627 0.0 28 2.9199987502405347E-5 0.0 0.0 2.4741149410788053 0.0 29 2.9199987502405347E-5 0.0 0.0 2.572781698849433 0.0 30 2.9199987502405347E-5 0.0 0.0 2.6856980505212342 0.0 31 2.9199987502405347E-5 0.0 0.0 2.78579560767948 0.0 32 2.9199987502405347E-5 0.0 0.0 2.8860975647502425 0.0 33 2.9199987502405347E-5 0.0 0.0 2.9848811224708798 0.0 34 5.8399975004810695E-5 0.0 0.0 3.0919282766546976 0.0 35 5.8399975004810695E-5 0.0 0.0 3.213341824689699 0.0 36 5.8399975004810695E-5 0.0 0.0 3.321965778198647 0.0 37 5.8399975004810695E-5 0.0 0.0 3.436488129183081 0.0 38 5.8399975004810695E-5 0.0 0.0 3.5736404704818785 0.0 39 5.8399975004810695E-5 0.0 0.0 3.8130803680016023 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 13415 0.0 40.957882 1 CGCGTAA 40 3.4609002E-7 39.375 31 GGGCGAT 6140 0.0 38.77036 7 CATACGA 830 0.0 38.76506 18 ACGGGAC 1060 0.0 38.207546 5 ACATACG 855 0.0 37.63158 17 GCGATAA 270 0.0 37.5 9 TAGGGAC 3785 0.0 37.391018 5 TATTGCG 235 0.0 37.340427 1 TACGGGA 1250 0.0 37.26 4 AGGGCGA 2925 0.0 37.23077 6 TCGTCCC 1200 0.0 37.125 38 CGTCATA 305 0.0 36.885246 38 TAAGGGA 4800 0.0 36.84375 4 AGGGATT 4940 0.0 36.710526 6 TCGTAAG 215 0.0 36.627907 1 ACGGGAT 1530 0.0 36.61765 5 GACCGAT 2155 0.0 36.542923 9 TAGGGAT 5170 0.0 36.4265 5 GTAGGGA 4720 0.0 36.181145 4 >>END_MODULE