##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547372_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2842171 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.280113687740815 31.0 31.0 33.0 30.0 34.0 2 31.68651604706402 31.0 31.0 34.0 30.0 34.0 3 31.767356362442655 31.0 31.0 34.0 30.0 34.0 4 35.56045572205191 37.0 35.0 37.0 33.0 37.0 5 35.46054477369588 37.0 35.0 37.0 33.0 37.0 6 35.48524138765753 37.0 35.0 37.0 33.0 37.0 7 35.882054598403826 37.0 35.0 37.0 35.0 37.0 8 35.87860582632079 37.0 35.0 37.0 35.0 37.0 9 37.62446418600429 39.0 37.0 39.0 35.0 39.0 10 36.91111196335477 39.0 37.0 39.0 32.0 39.0 11 36.5864196770708 39.0 35.0 39.0 32.0 39.0 12 35.975572546479434 37.0 35.0 39.0 31.0 39.0 13 35.66289677855414 38.0 35.0 39.0 30.0 39.0 14 36.67634213423471 39.0 35.0 41.0 31.0 41.0 15 36.89814933724959 39.0 35.0 41.0 31.0 41.0 16 37.04768643406748 39.0 35.0 41.0 32.0 41.0 17 36.964944755259275 38.0 35.0 41.0 32.0 41.0 18 36.828820292656566 38.0 35.0 40.0 31.0 41.0 19 36.72953492242374 38.0 35.0 40.0 31.0 41.0 20 36.56468101321138 38.0 35.0 40.0 31.0 41.0 21 36.41313488878748 38.0 35.0 40.0 31.0 41.0 22 36.3040355418446 38.0 35.0 40.0 30.0 41.0 23 36.25210094677625 38.0 35.0 40.0 30.0 41.0 24 36.1212516769751 38.0 35.0 40.0 30.0 41.0 25 36.015987074669326 38.0 35.0 40.0 30.0 41.0 26 35.775779149108196 37.0 34.0 40.0 30.0 41.0 27 35.752746404069285 37.0 34.0 40.0 30.0 41.0 28 35.82348669379851 37.0 34.0 40.0 30.0 41.0 29 35.84635372044821 37.0 34.0 40.0 30.0 41.0 30 35.81515784940456 37.0 35.0 40.0 30.0 41.0 31 35.69086377983591 37.0 34.0 40.0 29.0 41.0 32 35.48271796454189 37.0 34.0 40.0 29.0 41.0 33 35.258686053724425 37.0 34.0 40.0 27.0 41.0 34 35.01644482334103 37.0 34.0 40.0 26.0 41.0 35 34.848946104931755 37.0 34.0 40.0 25.0 41.0 36 34.59207063895874 37.0 33.0 40.0 24.0 41.0 37 34.54386206881993 37.0 33.0 40.0 24.0 41.0 38 34.47033975084539 37.0 33.0 40.0 23.0 41.0 39 34.32733779916831 36.0 33.0 40.0 23.0 41.0 40 34.17417073075477 36.0 33.0 40.0 23.0 41.0 41 34.14964053886976 36.0 33.0 40.0 23.0 41.0 42 34.05330221158403 36.0 33.0 40.0 23.0 41.0 43 33.91794160168406 36.0 33.0 40.0 23.0 41.0 44 33.83199110820566 36.0 33.0 40.0 23.0 41.0 45 33.67862595178123 35.0 33.0 40.0 22.0 41.0 46 33.59212235998467 35.0 33.0 40.0 22.0 41.0 47 33.54773059045357 35.0 33.0 40.0 22.0 41.0 48 33.43790468624161 35.0 32.0 40.0 22.0 41.0 49 33.329358437616875 35.0 32.0 39.0 20.0 41.0 50 33.19100117480616 35.0 32.0 39.0 20.0 41.0 51 32.71170629775619 35.0 31.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 1.0 12 11.0 13 15.0 14 56.0 15 140.0 16 372.0 17 967.0 18 2036.0 19 3733.0 20 6416.0 21 9786.0 22 14234.0 23 20278.0 24 28371.0 25 39585.0 26 52468.0 27 62689.0 28 68578.0 29 74774.0 30 85694.0 31 100275.0 32 120896.0 33 154687.0 34 247264.0 35 327863.0 36 220766.0 37 270644.0 38 374545.0 39 554876.0 40 149.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.05154475223342 24.156463492168488 29.3756779588561 15.416313796742 2 31.87165726481623 25.893269616782383 29.100219515293062 13.13485360310833 3 28.09377057186214 25.115378349860016 33.04765969394523 13.74319138433261 4 24.813813102730272 27.89487332043005 32.7000732890456 14.591240287794086 5 22.855450991513177 31.974078969914192 30.774010430758743 14.396459607813886 6 22.115347739456915 40.50766122094694 27.53849082268449 9.83850021691165 7 87.99709799304827 3.1964649558383367 7.515346543188288 1.2910905079251036 8 88.64392747656633 2.4859869444871543 7.281053814144188 1.5890317648023289 9 84.08631992937792 4.603136123758915 8.913538277605394 2.397005669257761 10 45.77455051085948 26.59030719826499 15.916881848417988 11.718260442457543 11 37.629227798045925 23.082073527595632 24.04218465391421 15.246514020444229 12 35.27388042450647 21.004753056730223 26.557022782936002 17.164343735827295 13 23.80451422521727 30.118103379423687 27.962040285401546 18.115342109957496 14 19.809997357653707 31.134122471870974 29.956044164830338 19.09983600564498 15 18.892916717537403 23.769787250661555 40.10212615637835 17.235169875422695 16 21.965427132990943 22.098705531792422 37.7817520479943 18.15411528722234 17 22.285147515754684 22.192612619015534 29.305696244173905 26.216543621055877 18 24.25466307270041 23.868233121793164 32.03262576389668 19.844478041609744 19 27.349339642125685 25.486573467958124 27.213035387385208 19.951051502530987 20 29.521798653212635 24.810118743734982 27.12915584600645 18.538926757045935 21 25.38130182877807 26.58460733010083 29.477290423412246 18.556800417708857 22 25.465990610698654 22.999988389157444 29.386303639013978 22.147717361129928 23 23.87977359560702 26.13685101987178 28.067628583924048 21.915746800597148 24 23.24318276416162 23.517198648497924 34.30180661191744 18.937811975423013 25 21.88812706906094 24.961763384398758 31.620370484393796 21.529739062146508 26 20.839949461168946 29.682872705407238 27.66427495038124 21.812902883042575 27 20.322704017457077 29.802921780568447 29.67185999716414 20.20251420481034 28 18.950935745949135 27.693337241144185 33.154620182951696 20.201106829954988 29 20.60477712284025 25.194367263616442 32.9382362989419 21.26261931460141 30 21.876481042132934 27.479029235046028 30.933149342527244 19.711340380293795 31 26.003220777356468 25.79169233659762 28.082265282419673 20.122821603626242 32 28.18334998140506 25.14912016201699 27.624235135746584 19.043294720831362 33 26.550091461773413 26.731255790028115 26.350631260399183 20.368021487799293 34 21.776029661832453 26.980924089366898 29.204154148360534 22.038892100440123 35 22.026964598541046 26.787621152984816 30.006357815909034 21.179056432565105 36 27.128874371035383 26.74719431026493 26.323820769404797 19.80011054929489 37 22.20102168377624 29.349395233432475 28.46760451781402 19.981978564977265 38 23.042350372303424 29.143038895267033 25.533474235012598 22.281136497416938 39 22.54895993238971 29.34056395621516 26.603677259390796 21.50679885200433 40 24.791928423729605 25.79222010216838 26.809963228813466 22.60588824528855 41 20.589647843145258 24.511649721287 29.18578790649824 25.712914529069504 42 22.955656081213974 25.398155142670863 26.475993175639328 25.170195600475832 43 21.969121491986233 25.698981518001556 27.927981813902118 24.403915176110093 44 21.106154415058068 27.43494321770224 27.979949130435855 23.478953236803836 45 20.68242903048409 30.240052410639613 25.90048241291604 23.177036145960255 46 22.3576625051765 29.16056071221612 27.172995572750548 21.308781209856832 47 22.01827405880927 26.889691014368942 28.40603186789254 22.68600305892925 48 23.003225351324744 24.924925347560016 30.413335439704365 21.65851386141087 49 22.519053216713562 24.832742294534707 30.11405717671456 22.534147312037174 50 21.769063156298476 27.941246321913777 28.635082125600462 21.65460839618728 51 20.11680507611963 29.560853305448546 27.19903200757449 23.123309610857333 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2331.0 1 3623.0 2 4915.0 3 22611.5 4 40308.0 5 27828.5 6 15349.0 7 15718.5 8 16088.0 9 17174.0 10 18260.0 11 18415.0 12 18570.0 13 18486.0 14 18402.0 15 17355.5 16 16309.0 17 15434.5 18 14560.0 19 14616.5 20 14673.0 21 14061.5 22 13450.0 23 14255.0 24 15060.0 25 16701.5 26 23040.0 27 27737.0 28 30776.5 29 33816.0 30 39622.5 31 45429.0 32 50301.0 33 55173.0 34 62369.0 35 69565.0 36 73623.0 37 77681.0 38 92366.5 39 107052.0 40 131434.5 41 155817.0 42 175209.5 43 194602.0 44 202960.0 45 211318.0 46 209932.0 47 208546.0 48 202475.0 49 196404.0 50 194647.0 51 192890.0 52 180607.0 53 168324.0 54 161449.0 55 154574.0 56 148445.0 57 142316.0 58 136810.0 59 131304.0 60 121347.0 61 111390.0 62 102512.0 63 93634.0 64 84666.0 65 75698.0 66 63867.0 67 52036.0 68 44832.5 69 37629.0 70 31085.5 71 24542.0 72 21149.5 73 17757.0 74 15744.5 75 10875.5 76 8019.0 77 6079.0 78 4139.0 79 3262.5 80 2386.0 81 1633.5 82 881.0 83 690.0 84 499.0 85 467.5 86 436.0 87 281.5 88 127.0 89 93.5 90 60.0 91 41.0 92 22.0 93 17.0 94 12.0 95 8.5 96 5.0 97 3.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2842171.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.786816689754406 #Duplication Level Percentage of deduplicated Percentage of total 1 83.0302612485824 16.429045590281188 2 6.353956752276324 2.5144915502383776 3 1.9463660284586213 1.1553716344882816 4 0.9476483307121283 0.7500377522461058 5 0.6247716741782069 0.6181121294957572 6 0.4195941186361285 0.4981459145731283 7 0.2920681539347458 0.40453693159752513 8 0.2550613380727826 0.40374815528717006 9 0.22152845898300394 0.3945008708514429 >10 3.0835175016197502 15.647075347295672 >50 1.566765570226982 22.43670712667328 >100 1.2550513374018448 37.307929745997626 >500 0.0025122535178766277 0.3663945205799795 >1k 7.177867193933222E-4 0.19873147898886956 >5k 0.0 0.0 >10k+ 1.7944667984833056E-4 0.8751712514056919 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 24648 0.8672243858655936 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.020758779116386735 0.0 2 0.0 0.0 0.0 0.08377398826460476 0.0 3 0.0 0.0 0.0 0.12733224003763322 0.0 4 0.0 0.0 0.0 0.2563181455303006 0.0 5 0.0 0.0 0.0 0.43793987061299267 0.0 6 0.0 0.0 0.0 0.7676877992210884 0.0 7 0.0 0.0 0.0 0.9037457633618807 0.0 8 7.036874276741265E-5 0.0 0.0 1.2002796453837576 0.0 9 7.036874276741265E-5 0.0 3.518437138370633E-5 1.3157899366364656 0.0 10 7.036874276741265E-5 0.0 3.518437138370633E-5 1.4938228558380195 0.0 11 7.036874276741265E-5 0.0 3.518437138370633E-5 1.7332173187327575 0.0 12 7.036874276741265E-5 0.0 3.518437138370633E-5 1.9073799570821037 0.0 13 7.036874276741265E-5 0.0 3.518437138370633E-5 1.9927020576875916 0.0 14 7.036874276741265E-5 0.0 3.518437138370633E-5 2.0317918942948894 0.0 15 7.036874276741265E-5 0.0 3.518437138370633E-5 2.0777074989506263 0.0 16 7.036874276741265E-5 0.0 3.518437138370633E-5 2.17115718934575 0.0 17 7.036874276741265E-5 0.0 3.518437138370633E-5 2.267491998194338 0.0 18 7.036874276741265E-5 0.0 3.518437138370633E-5 2.3891947388105783 0.0 19 7.036874276741265E-5 0.0 3.518437138370633E-5 2.463750421772652 0.0 20 7.036874276741265E-5 0.0 3.518437138370633E-5 2.5408745638457364 0.0 21 7.036874276741265E-5 0.0 3.518437138370633E-5 2.646533231111006 0.0 22 7.036874276741265E-5 0.0 3.518437138370633E-5 2.7563788385709374 0.0 23 7.036874276741265E-5 0.0 3.518437138370633E-5 2.8755834888189344 0.0 24 7.036874276741265E-5 0.0 3.518437138370633E-5 2.9682943074150008 0.0 25 7.036874276741265E-5 0.0 3.518437138370633E-5 3.0538275142487907 0.0 26 7.036874276741265E-5 0.0 3.518437138370633E-5 3.1398884866533363 0.0 27 7.036874276741265E-5 0.0 3.518437138370633E-5 3.232528936506635 0.0 28 7.036874276741265E-5 0.0 3.518437138370633E-5 3.3185195401684133 0.0 29 7.036874276741265E-5 0.0 3.518437138370633E-5 3.4189357360975112 0.0 30 7.036874276741265E-5 0.0 3.518437138370633E-5 3.5334256805800917 0.0 31 7.036874276741265E-5 0.0 3.518437138370633E-5 3.638943610359827 0.0 32 1.0555311415111899E-4 0.0 3.518437138370633E-5 3.742139371628238 0.0 33 1.0555311415111899E-4 0.0 3.518437138370633E-5 3.843857389298533 0.0 34 1.0555311415111899E-4 0.0 3.518437138370633E-5 3.958136227552811 0.0 35 1.407374855348253E-4 0.0 3.518437138370633E-5 4.091168335754604 0.0 36 1.407374855348253E-4 0.0 3.518437138370633E-5 4.205447174008882 0.0 37 1.407374855348253E-4 0.0 3.518437138370633E-5 4.330457245535191 0.0 38 1.407374855348253E-4 0.0 3.518437138370633E-5 4.464017119307741 0.0 39 1.407374855348253E-4 0.0 3.518437138370633E-5 4.653696065437301 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTAGTA 35 1.2127748E-7 45.0 16 CGAATAA 20 7.035043E-4 45.0 17 CGTTTTT 13955 0.0 42.001076 1 GTTTACG 170 0.0 41.02941 1 CTACGCC 45 1.9299478E-8 40.0 13 TCGTAAG 180 0.0 40.0 1 CACGACC 470 0.0 39.734043 27 AGGGCGA 2850 0.0 39.71053 6 TACGGGT 255 0.0 39.705883 4 GGGCGAT 4900 0.0 39.58163 7 ACTTACG 40 3.4606273E-7 39.375 22 CAATACG 40 3.4606273E-7 39.375 1 CGACATA 35 6.251539E-6 38.571426 45 GTATCGC 35 6.251539E-6 38.571426 36 GGCGATT 1270 0.0 37.913387 8 GTTGATC 1215 0.0 37.77778 16 TAAGGGC 1510 0.0 37.698677 4 TACGGGA 570 0.0 37.499996 4 ACGTATA 30 1.14034505E-4 37.499996 24 CGTTTAG 30 1.14034505E-4 37.499996 30 >>END_MODULE