##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547371_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1921418 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.300165294589725 31.0 31.0 33.0 30.0 34.0 2 31.70358401971877 31.0 31.0 34.0 30.0 34.0 3 31.716434945441335 31.0 31.0 34.0 30.0 34.0 4 35.533497656418334 37.0 35.0 37.0 33.0 37.0 5 35.45781813223359 37.0 35.0 37.0 33.0 37.0 6 35.50222335795751 37.0 35.0 37.0 33.0 37.0 7 35.92825975399418 37.0 35.0 37.0 35.0 37.0 8 35.93487934431758 37.0 35.0 37.0 35.0 37.0 9 37.69613743599779 39.0 37.0 39.0 35.0 39.0 10 36.96160543931617 39.0 37.0 39.0 32.0 39.0 11 36.63685361540279 39.0 35.0 39.0 32.0 39.0 12 36.32822165713031 38.0 35.0 39.0 32.0 39.0 13 36.171220942033436 38.0 35.0 39.0 31.0 39.0 14 37.28574781749729 39.0 35.0 41.0 32.0 41.0 15 37.44359530305223 39.0 35.0 41.0 32.0 41.0 16 37.5344500780153 39.0 35.0 41.0 32.0 41.0 17 37.44101387621017 39.0 35.0 41.0 32.0 41.0 18 37.26630072165453 39.0 36.0 41.0 32.0 41.0 19 37.139984636346696 38.0 35.0 41.0 32.0 41.0 20 36.934088261898246 38.0 35.0 41.0 32.0 41.0 21 36.81051286081425 38.0 35.0 41.0 31.0 41.0 22 36.70910962632806 38.0 35.0 40.0 31.0 41.0 23 36.610627151405886 38.0 35.0 40.0 31.0 41.0 24 36.4804113420401 38.0 35.0 40.0 31.0 41.0 25 36.397214453075804 38.0 35.0 40.0 31.0 41.0 26 36.19623892354501 38.0 35.0 40.0 30.0 41.0 27 36.169777216618144 38.0 35.0 40.0 30.0 41.0 28 36.1871794684967 38.0 35.0 40.0 30.0 41.0 29 36.168368881732135 38.0 35.0 40.0 30.0 41.0 30 36.131615817068436 38.0 35.0 40.0 30.0 41.0 31 36.01780143623095 38.0 35.0 40.0 30.0 41.0 32 35.7677251904583 38.0 35.0 40.0 29.0 41.0 33 35.48654014899413 38.0 34.0 40.0 27.0 41.0 34 35.16397681295793 38.0 34.0 40.0 25.0 41.0 35 34.94353493097285 38.0 34.0 40.0 24.0 41.0 36 34.68287067155611 38.0 34.0 40.0 23.0 41.0 37 34.621986470408835 38.0 34.0 40.0 23.0 41.0 38 34.5496778941386 38.0 33.0 40.0 23.0 41.0 39 34.41509551799764 38.0 33.0 40.0 22.0 41.0 40 34.30605937906275 38.0 33.0 40.0 22.0 41.0 41 34.282075009185924 37.0 33.0 40.0 22.0 41.0 42 34.19111614443083 37.0 33.0 40.0 21.0 41.0 43 34.08434135622753 37.0 33.0 40.0 21.0 41.0 44 33.98752848156934 37.0 33.0 40.0 20.0 41.0 45 33.843928286296894 37.0 33.0 40.0 20.0 41.0 46 33.75933138962995 37.0 33.0 40.0 20.0 41.0 47 33.72362338647811 37.0 33.0 40.0 20.0 41.0 48 33.6141219661729 36.0 33.0 40.0 20.0 41.0 49 33.47655325389894 36.0 32.0 40.0 19.0 41.0 50 33.37106813821875 36.0 32.0 40.0 18.0 41.0 51 32.90230912794613 35.0 31.0 39.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 4.0 12 5.0 13 9.0 14 21.0 15 63.0 16 176.0 17 500.0 18 1090.0 19 2111.0 20 3624.0 21 5825.0 22 8922.0 23 12903.0 24 19206.0 25 28362.0 26 39467.0 27 45270.0 28 46035.0 29 47951.0 30 53604.0 31 61886.0 32 74661.0 33 93871.0 34 140333.0 35 187597.0 36 153436.0 37 187299.0 38 270195.0 39 436831.0 40 159.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.609850641557433 23.848636788038835 28.244088480486806 18.297424089916923 2 34.02913889637757 25.05555792648971 27.829863153150434 13.08544002398229 3 26.774392662086022 25.01397405457844 35.03959055239412 13.172042730941419 4 22.975115253422214 28.391219401504515 34.77582701942003 13.85783832565324 5 21.162235390737465 32.05549234992073 33.616474915921465 13.165797343420326 6 20.266386595732943 40.04885974837334 30.299133244301863 9.385620411591855 7 86.5315615862868 2.4982070533324867 9.980805842351845 0.9894255180288725 8 87.1182636989973 2.2046738398412002 9.498661925723606 1.1784005354378901 9 82.70464833784216 4.742487059036607 10.784743351004309 1.7681212521169263 10 39.19938295571291 33.3299157184954 17.27031806717747 10.200383258614211 11 27.720933185803403 25.217469597973995 30.817188139176377 16.244409077046225 12 28.005462632285116 23.010245558228352 31.433816067092117 17.55047574239442 13 21.218079564155225 28.917601479740483 32.138035554991156 17.726283401113136 14 17.392779707486866 30.819634249288807 32.8073329176681 18.980253125556228 15 16.818412235130513 27.44369002476296 38.858592976645376 16.879304763461153 16 19.99106909584484 24.577993960710266 38.15354077041019 17.277396173034706 17 19.81021308221324 25.50585036676038 32.095827144327785 22.588109406698596 18 20.442662658515744 26.439067397099436 34.028774582105505 19.089495362279315 19 23.650970272996297 27.629906662683496 30.352947666775265 18.366175397544936 20 25.280704146625045 26.3026577246596 31.21538363854195 17.201254490173405 21 22.419744168109176 27.565527126320248 32.32341947457555 17.691309230995024 22 22.405952270666766 25.159855898091934 31.636739116631574 20.797452714609733 23 20.36376259616596 28.126467015506257 31.795163780083254 19.714606608244537 24 19.63190726848609 26.4812237628668 36.39515191384696 17.49171705480015 25 19.405876285118595 28.21239313881727 33.5084817567026 18.873248819361535 26 19.22809092035153 30.91799910274599 31.09682536543324 18.75708461146924 27 18.54125442771953 30.67614647099174 32.285270565800886 18.497328535487853 28 17.570981431422002 29.310332265025103 35.6015713395003 17.517114964052592 29 18.733768498057163 27.089524507421082 34.79742565126381 19.379281343257947 30 18.7179468496704 29.77826792504286 32.98954209859593 18.514243126690808 31 21.821019684420566 28.73752613954902 30.978735496388605 18.462718679641807 32 22.558860175141486 28.700886532758616 30.645179757866327 18.09507353423357 33 22.112731326551536 29.227789059954677 29.92628360929272 18.733196004201062 34 19.34706555262832 29.576333728527576 30.550510092025785 20.52609062681832 35 19.76545447164542 28.567599554079333 31.16099672221245 20.5059492520628 36 22.19105889504522 29.91191921799421 28.847392915024216 19.04962897193635 37 20.00819186663183 31.596508412016544 29.733509314475036 18.661790406876587 38 20.272996297526095 31.252699828980475 28.501658670835813 19.97264520265762 39 20.258840085811624 30.774042920384844 29.00389191732356 19.963225076479972 40 21.712454031345597 29.195156910156978 29.06285878450186 20.02953027399556 41 18.555358594537992 28.650507073421817 30.40566914643248 22.38846518560771 42 20.171456705412357 29.67022272092798 28.30305534766511 21.855265225994554 43 20.00767141767174 29.950068126768876 28.793942806822876 21.248317648736506 44 19.47910345380339 31.076736035573727 28.885645913590903 20.558514597031984 45 18.980565394932285 32.458580069511164 27.883781665415853 20.677072870140698 46 20.24879542088187 31.647304230521417 27.875870841222472 20.22802950737424 47 19.75343210066732 29.702126242181553 29.85971818729709 20.684723469854035 48 20.59895348123105 28.68537715374791 30.398486950783223 20.31718241423782 49 19.57772853174062 29.566237018701813 29.916447123947005 20.939587325610564 50 19.22528049596704 30.889842814005075 29.573419214351066 20.311457475676818 51 18.18937888580205 31.49606176271899 28.7231097033545 21.59144964812446 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1187.0 1 1836.0 2 2485.0 3 22671.0 4 42857.0 5 29319.0 6 15781.0 7 15830.5 8 15880.0 9 16711.5 10 17543.0 11 18518.5 12 19494.0 13 19228.0 14 18962.0 15 18266.0 16 17570.0 17 17085.5 18 16601.0 19 16006.5 20 15412.0 21 15303.5 22 15195.0 23 15415.0 24 15635.0 25 18425.5 26 24395.5 27 27575.0 28 32154.0 29 36733.0 30 40900.0 31 45067.0 32 51916.5 33 58766.0 34 64819.0 35 70872.0 36 74470.5 37 78069.0 38 84520.5 39 90972.0 40 104596.5 41 118221.0 42 126430.5 43 134640.0 44 138586.5 45 142533.0 46 143466.5 47 144400.0 48 140990.5 49 137581.0 50 127572.0 51 117563.0 52 109765.5 53 101968.0 54 93038.5 55 84109.0 56 78193.0 57 72277.0 58 67997.0 59 63717.0 60 58360.5 61 53004.0 62 45804.5 63 38605.0 64 31449.5 65 24294.0 66 20298.0 67 16302.0 68 13116.0 69 9930.0 70 8499.5 71 7069.0 72 5815.0 73 4561.0 74 3799.5 75 2399.0 76 1760.0 77 1359.5 78 959.0 79 727.0 80 495.0 81 349.5 82 204.0 83 208.5 84 213.0 85 125.0 86 37.0 87 35.5 88 34.0 89 25.5 90 17.0 91 14.5 92 12.0 93 7.0 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1921418.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.955253701550745 #Duplication Level Percentage of deduplicated Percentage of total 1 78.28467148428892 20.318985093172735 2 6.964623083165645 3.615371181184816 3 2.8488573350870414 2.2182844467512375 4 1.6681978064129128 1.7319398915927036 5 1.1300180473340404 1.4664952552942998 6 0.8301764726194042 1.292846457833708 7 0.6444383665570286 1.1708592909300441 8 0.5267087005932657 1.0936686360569876 9 0.4326010301964782 1.0105442541271625 >10 5.078789590588893 30.078266096505118 >50 1.2394874464335763 22.545100416460826 >100 0.34960660379629405 11.66627608524475 >500 0.0014186922762153857 0.22009345016837986 >1k 2.0267032517362653E-4 0.06354514526849973 >5k 0.0 0.0 >10k+ 2.0267032517362653E-4 1.5077242994087245 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 28662 1.491710809412632 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.5613468802727986E-4 0.0 0.0 0.03424554157398338 0.0 2 1.5613468802727986E-4 0.0 0.0 0.09175515166403146 0.0 3 1.5613468802727986E-4 0.0 0.0 0.14010486005647912 0.0 4 1.5613468802727986E-4 0.0 0.0 0.22566666909542848 0.0 5 1.5613468802727986E-4 0.0 0.0 0.37404666761735345 0.0 6 1.5613468802727986E-4 0.0 0.0 0.6740854931097762 0.0 7 1.5613468802727986E-4 0.0 0.0 0.8154394306704735 0.0 8 2.602244800454664E-4 0.0 0.0 1.0989279792320048 0.0 9 2.602244800454664E-4 0.0 0.0 1.2274788723744652 0.0 10 2.602244800454664E-4 0.0 0.0 1.4191081794799465 0.0 11 2.602244800454664E-4 0.0 0.0 1.6538306604809574 0.0 12 2.602244800454664E-4 0.0 0.0 1.8391104902733293 0.0 13 3.122693760545597E-4 0.0 0.0 1.9593862449503439 0.0 14 3.122693760545597E-4 0.0 0.0 2.0264721159060652 0.0 15 3.122693760545597E-4 0.0 0.0 2.0901230237251864 0.0 16 3.122693760545597E-4 0.0 0.0 2.189424685310536 0.0 17 3.122693760545597E-4 0.0 0.0 2.3166744560527692 0.0 18 3.122693760545597E-4 0.0 0.0 2.4624001648782308 0.0 19 3.122693760545597E-4 0.0 0.0 2.563054993759817 0.0 20 3.122693760545597E-4 0.0 0.0 2.667977504114149 0.0 21 3.122693760545597E-4 0.0 0.0 2.8004317644572914 0.0 22 3.122693760545597E-4 0.0 0.0 2.9513099179876527 0.0 23 3.122693760545597E-4 0.0 0.0 3.120403785121197 0.0 24 3.122693760545597E-4 0.0 0.0 3.252753955672321 0.0 25 3.122693760545597E-4 0.0 0.0 3.3744869674375906 0.0 26 3.122693760545597E-4 0.0 0.0 3.490390950849841 0.0 27 3.122693760545597E-4 0.0 0.0 3.607387877078283 0.0 28 3.122693760545597E-4 0.0 0.0 3.7338049294843705 0.0 29 3.122693760545597E-4 0.0 0.0 3.8711514100523674 0.0 30 3.122693760545597E-4 0.0 0.0 4.028222906207811 0.0 31 3.122693760545597E-4 0.0 0.0 4.182588067770782 0.0 32 3.122693760545597E-4 0.0 0.0 4.329875123476516 0.0 33 3.122693760545597E-4 0.0 0.0 4.4797123790866955 0.0 34 3.122693760545597E-4 0.0 0.0 4.632255969289348 0.0 35 3.122693760545597E-4 0.0 0.0 4.798175097766337 0.0 36 3.122693760545597E-4 0.0 0.0 4.953997516417562 0.0 37 3.122693760545597E-4 0.0 0.0 5.128712232320089 0.0 38 3.122693760545597E-4 0.0 0.0 5.304103531870733 0.0 39 3.122693760545597E-4 0.0 0.0 5.507442940578261 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGTTAG 125 0.0 44.999996 1 CGTTTTT 15100 0.0 43.65894 1 CGTTAGG 275 0.0 43.363632 2 GCGATCG 60 3.6379788E-12 41.249996 9 GTATGCG 55 6.184564E-11 40.909092 1 TATAGCG 55 6.184564E-11 40.909092 1 CTATGCG 85 0.0 39.705883 1 TACGGGT 205 0.0 39.512196 4 AGGGCGA 1425 0.0 39.315792 6 TATCCGG 115 0.0 39.130432 2 ATAGGGA 2860 0.0 38.62762 4 GACCGAT 1035 0.0 38.47826 9 TAGGGAT 3090 0.0 38.300972 5 TACTCGC 100 0.0 38.25 45 AGGGTAC 620 0.0 38.10484 6 GGGCGAT 2800 0.0 37.848213 7 TCGTCCC 490 0.0 37.65306 38 TAACGGG 640 0.0 37.61719 3 TCGATAG 150 0.0 37.500004 1 ACGGGAT 750 0.0 37.5 5 >>END_MODULE