##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547369_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2782426 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.257598944230683 31.0 31.0 33.0 30.0 34.0 2 31.63671882019504 31.0 31.0 34.0 30.0 34.0 3 31.589526909251134 31.0 31.0 34.0 30.0 34.0 4 35.442729114808444 37.0 35.0 37.0 33.0 37.0 5 35.38221034449793 37.0 35.0 37.0 33.0 37.0 6 35.429608550236374 37.0 35.0 37.0 33.0 37.0 7 35.88953380970419 37.0 35.0 37.0 35.0 37.0 8 35.898533509965766 37.0 35.0 37.0 35.0 37.0 9 37.65705143640837 39.0 37.0 39.0 35.0 39.0 10 36.86453763729925 39.0 37.0 39.0 32.0 39.0 11 36.6035032018821 39.0 35.0 39.0 32.0 39.0 12 36.04861728577867 38.0 35.0 39.0 31.0 39.0 13 35.744006489301064 38.0 35.0 39.0 30.0 39.0 14 36.83230173956109 39.0 35.0 41.0 31.0 41.0 15 37.08245035088085 39.0 35.0 41.0 32.0 41.0 16 37.216858238098695 39.0 35.0 41.0 32.0 41.0 17 37.13720939927962 39.0 35.0 41.0 32.0 41.0 18 36.91757876040549 38.0 35.0 40.0 32.0 41.0 19 36.71978230508197 38.0 35.0 40.0 31.0 41.0 20 36.446506394060435 38.0 35.0 40.0 31.0 41.0 21 36.30217083940418 37.0 35.0 40.0 31.0 41.0 22 36.18768297881058 37.0 35.0 40.0 31.0 41.0 23 36.1099781270014 37.0 35.0 40.0 31.0 41.0 24 35.95391719312571 37.0 35.0 40.0 30.0 41.0 25 35.85515841211949 37.0 35.0 40.0 30.0 41.0 26 35.617082718462235 36.0 34.0 40.0 30.0 41.0 27 35.559395290297026 36.0 34.0 40.0 30.0 41.0 28 35.54854468726212 36.0 34.0 40.0 30.0 41.0 29 35.537678630087555 36.0 34.0 40.0 29.0 41.0 30 35.458644003470354 36.0 34.0 40.0 29.0 41.0 31 35.28333943112953 36.0 34.0 40.0 29.0 41.0 32 34.91629894200241 36.0 34.0 40.0 26.0 41.0 33 34.51439642959058 36.0 33.0 40.0 24.0 41.0 34 34.0894755152518 36.0 33.0 40.0 21.0 41.0 35 33.78832680545682 36.0 33.0 40.0 20.0 41.0 36 33.43935508078202 36.0 33.0 40.0 18.0 41.0 37 33.34017220943163 36.0 33.0 40.0 18.0 41.0 38 33.27198135727599 36.0 33.0 40.0 18.0 41.0 39 33.14621053713558 36.0 32.0 40.0 16.0 41.0 40 33.038623848397044 36.0 32.0 40.0 15.0 41.0 41 33.0099179636763 35.0 32.0 40.0 15.0 41.0 42 32.90219075008643 35.0 32.0 40.0 15.0 41.0 43 32.76276781484934 35.0 32.0 40.0 15.0 41.0 44 32.63858769289821 35.0 31.0 40.0 14.0 41.0 45 32.48511838230379 35.0 31.0 40.0 13.0 41.0 46 32.3936431732596 35.0 31.0 40.0 13.0 41.0 47 32.34934082703367 35.0 31.0 40.0 13.0 41.0 48 32.229869545497344 35.0 31.0 39.0 12.0 41.0 49 32.106272368070165 35.0 31.0 39.0 10.0 41.0 50 31.955834584639447 35.0 31.0 39.0 10.0 41.0 51 31.51850830893616 35.0 30.0 39.0 10.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 3.0 12 11.0 13 14.0 14 45.0 15 145.0 16 334.0 17 988.0 18 2064.0 19 4191.0 20 7414.0 21 11669.0 22 17531.0 23 25755.0 24 38237.0 25 57077.0 26 78116.0 27 84089.0 28 80479.0 29 79415.0 30 85431.0 31 97728.0 32 117288.0 33 146504.0 34 229075.0 35 327846.0 36 216941.0 37 241601.0 38 332380.0 39 499891.0 40 164.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.383818293819854 23.588983139174232 26.95568543422179 20.071513132784126 2 35.70287224170562 24.307636573263764 27.419956541521678 12.569534643508936 3 25.436651325138566 23.56684418561356 37.910945340505016 13.08555914874286 4 22.468378314463706 26.169860402397045 37.782711921179576 13.579049361959672 5 21.048610097806733 29.814916910638413 36.344614376087634 12.791858615467222 6 18.90544438558294 39.06353664032754 32.98463283479956 9.046386139289957 7 82.35579311004139 3.0116524213042863 13.447940753860122 1.184613714794212 8 82.95893583513092 2.4638570801164166 12.917073086579842 1.6601339981728174 9 78.81945467732116 4.6065915140240925 14.520062707867162 2.053891100787586 10 41.29417997100372 22.880931963689243 22.976747629586555 12.848140435720481 11 34.1254718005079 23.536079665730554 27.969225416956284 14.369223116805262 12 31.656115921860994 21.013137456306115 31.270265588375036 16.06048103345785 13 19.554554191198616 33.26902494441901 32.21796374818234 14.958457116200035 14 16.077300887786414 34.296222073830535 33.530163964827814 16.096313073555237 15 15.828812697983702 25.91080589384947 43.77284427330682 14.487537134860009 16 16.64928375453651 22.18840680758446 44.07287022188551 17.089439215993522 17 16.970837679061365 24.32923642892929 33.4025055832572 25.297420308752145 18 19.615292554051752 25.37803341400634 37.01981651982838 17.98685751211353 19 23.255101842780366 28.5856658901261 30.200515665106636 17.9587166019869 20 25.157147036435113 25.25774270366939 32.373080182545735 17.212030077349766 21 20.3540363697004 29.252853445159012 33.06111285619097 17.331997328949626 22 21.38730733539724 25.85628512672035 30.866553144629904 21.889854393252506 23 18.60416054191558 29.78422427047476 31.198170229864154 20.413444957745508 24 18.65904070764146 25.62519182900102 39.981189077445364 15.734578385912151 25 17.594969282201934 27.673835710275853 36.26137766107706 18.469817346445154 26 17.057884019197637 33.079765643363025 31.83915762719296 18.023192710246384 27 17.050085069647857 32.42709779163938 32.633248826743284 17.889568311969484 28 16.276623349551794 29.030134134744284 38.14218239766305 16.551060118040876 29 16.240431910857648 26.06674894498542 37.80880425930465 19.884014884852284 30 17.22342301286719 31.097538622770198 34.15551752319738 17.523520841165226 31 22.071135045460327 28.55637490448982 30.57881862806055 18.7936714219893 32 23.290251025543895 28.57883731678758 30.713054003951946 17.417857653716577 33 22.237644415341144 29.429749434486308 28.84245618751406 19.490149962658485 34 17.354459741247386 30.465931528816938 30.70130166983776 21.478307060097915 35 18.845856098239448 28.382425983655992 31.68623352426983 21.085484393834733 36 23.05232915448605 30.123424666100735 27.969872334430455 18.85437384498276 37 17.906064707560958 33.34708631963617 30.49637258996286 18.250476382840013 38 18.461012080824432 33.27078599754315 28.381563427023753 19.88663849460866 39 17.86944199055069 33.377814899659505 29.08749415078784 19.665248959001964 40 21.232622179349963 29.92913378469005 27.533849956836224 21.304394079123757 41 16.81396019157383 27.459526327025408 30.965567458038418 24.760946023362347 42 18.979803955253438 29.33062730149876 27.527632361112207 24.16193638213559 43 19.23026883733835 30.232753719236378 28.470406760143845 22.066570683281427 44 18.43768711189444 32.08998190787464 28.33836371569271 21.13396726453821 45 17.096627187928807 35.17042322059958 26.356100755240213 21.376848836231403 46 19.60569661151815 34.04399613862147 26.82547532261415 19.524831927246222 47 19.421756409694275 29.656925287500908 29.181369064262626 21.739949238542195 48 19.673335427429155 28.070611761103443 31.155078338112137 21.100974473355265 49 18.58410610021614 28.490173682965874 31.297436122290407 21.62828409452758 50 17.725251273528926 31.868987710724383 29.6357567101515 20.770004305595187 51 16.61542840672133 33.37537098920151 27.645335401552458 22.363865202524703 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2143.0 1 2999.5 2 3856.0 3 36828.5 4 69801.0 5 48901.5 6 28002.0 7 29181.0 8 30360.0 9 33332.0 10 36304.0 11 38172.0 12 40040.0 13 39898.5 14 39757.0 15 38034.0 16 36311.0 17 33784.5 18 31258.0 19 29339.0 20 27420.0 21 26813.5 22 26207.0 23 26152.5 24 26098.0 25 27257.0 26 30446.0 27 32476.0 28 37752.5 29 43029.0 30 48668.5 31 54308.0 32 59892.0 33 65476.0 34 75265.5 35 85055.0 36 89805.0 37 94555.0 38 106106.5 39 117658.0 40 144963.5 41 172269.0 42 194242.0 43 216215.0 44 219568.5 45 222922.0 46 223991.5 47 225061.0 48 220111.0 49 215161.0 50 198180.5 51 181200.0 52 167663.5 53 154127.0 54 135736.5 55 117346.0 56 104369.0 57 91392.0 58 82770.5 59 74149.0 60 65975.5 61 57802.0 62 50987.0 63 44172.0 64 37560.5 65 30949.0 66 25815.0 67 20681.0 68 17065.0 69 13449.0 70 12235.0 71 11021.0 72 8525.5 73 6030.0 74 5172.5 75 3406.5 76 2498.0 77 2057.5 78 1617.0 79 1140.5 80 664.0 81 536.0 82 408.0 83 313.0 84 218.0 85 180.0 86 142.0 87 88.0 88 34.0 89 26.5 90 19.0 91 17.5 92 16.0 93 14.0 94 12.0 95 8.5 96 5.0 97 3.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2782426.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.25907054282009 #Duplication Level Percentage of deduplicated Percentage of total 1 80.55137440936423 21.957555973459726 2 7.75500034763652 4.227882030716365 3 2.842780344034148 2.3247464980730768 4 1.543644619935483 1.6831327035146417 5 1.0230030410323356 1.3943056030509957 6 0.7284339698552661 1.1913859782042708 7 0.5357638467104373 1.0223097144240723 8 0.39884979785445135 0.8697819820563218 9 0.33191398334771566 0.8142900017601415 >10 2.9500030125143817 17.46742391037102 >50 0.6842112007591801 13.35294479206388 >100 0.6484540220710477 30.480551780394894 >500 0.005093089502637617 0.9192563803904586 >1k 0.0013402867112204254 0.5480610851014376 >5k 0.0 0.0 >10k+ 1.3402867112204253E-4 1.74637156641882 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 47800 1.7179252925324877 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2791 0.10030814835686555 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.050423623126005866 0.0 2 0.0 0.0 0.0 0.14476575477658704 0.0 3 0.0 0.0 0.0 0.21283584900371114 0.0 4 0.0 0.0 0.0 0.39196010963094796 0.0 5 0.0 0.0 0.0 0.6715362780537559 0.0 6 0.0 0.0 0.0 1.293870888210504 0.0 7 0.0 0.0 0.0 1.582072622955651 0.0 8 3.593985967641188E-5 0.0 0.0 2.2071746023074827 0.0 9 3.593985967641188E-5 0.0 0.0 2.445671511120152 0.0 10 3.593985967641188E-5 0.0 0.0 2.8223571803886247 0.0 11 3.593985967641188E-5 0.0 0.0 3.21234059773737 0.0 12 3.593985967641188E-5 0.0 0.0 3.5020518065889266 0.0 13 3.593985967641188E-5 0.0 0.0 3.6733411778067055 0.0 14 3.593985967641188E-5 0.0 0.0 3.748527364249759 0.0 15 3.593985967641188E-5 0.0 0.0 3.8300749058555374 0.0 16 3.593985967641188E-5 0.0 0.0 4.001292397353963 0.0 17 3.593985967641188E-5 0.0 0.0 4.2042447849466615 0.0 18 3.593985967641188E-5 0.0 0.0 4.447737334254352 0.0 19 3.593985967641188E-5 0.0 0.0 4.5987566246146345 0.0 20 3.593985967641188E-5 0.0 0.0 4.750386892589416 0.0 21 3.593985967641188E-5 0.0 0.0 4.975226654725049 0.0 22 3.593985967641188E-5 0.0 0.0 5.2109921342023116 0.0 23 3.593985967641188E-5 0.0 0.0 5.519859288261395 0.0 24 3.593985967641188E-5 0.0 0.0 5.73686416098757 0.0 25 3.593985967641188E-5 0.0 0.0 5.953329935818599 0.0 26 3.593985967641188E-5 0.0 0.0 6.137845175397297 0.0 27 3.593985967641188E-5 0.0 0.0 6.323510490485641 0.0 28 3.593985967641188E-5 0.0 0.0 6.526678517236397 0.0 29 3.593985967641188E-5 0.0 0.0 6.747241436070537 0.0 30 3.593985967641188E-5 0.0 0.0 6.991884060887872 0.0 31 3.593985967641188E-5 0.0 0.0 7.2290871347521914 0.0 32 3.593985967641188E-5 0.0 0.0 7.456658326223231 0.0 33 3.593985967641188E-5 0.0 0.0 7.682648163868509 0.0 34 3.593985967641188E-5 0.0 0.0 7.913166423833014 0.0 35 3.593985967641188E-5 0.0 0.0 8.173910105785383 0.0 36 3.593985967641188E-5 3.593985967641188E-4 0.0 8.417654234110808 0.0 37 3.593985967641188E-5 3.593985967641188E-4 0.0 8.679727690871204 0.0 38 3.593985967641188E-5 3.593985967641188E-4 0.0 8.943741900054125 0.0 39 3.593985967641188E-5 3.593985967641188E-4 0.0 9.20311986733879 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATGCG 80 0.0 45.0 1 GTCGACG 20 7.035017E-4 45.0 1 TCCGATT 55 1.8189894E-12 45.0 12 CTACGCT 20 7.035017E-4 45.0 18 CGTCGTC 20 7.035017E-4 45.0 41 TACGTAG 45 3.8562575E-10 45.0 1 GTCGTAA 25 3.892241E-5 44.999996 9 CGTTTTT 29920 0.0 43.766716 1 CGTTGAT 720 0.0 41.25 25 GTTTACG 115 0.0 41.086956 1 TTAATCG 730 0.0 40.993153 20 AGGGCGA 2505 0.0 40.958084 6 TACGGGA 610 0.0 40.573772 4 CCCGTAT 50 1.0822987E-9 40.499996 45 CGTTAGG 395 0.0 40.44304 2 AATCGTT 740 0.0 40.43919 22 TAATCGT 740 0.0 40.43919 21 TCGTTGA 735 0.0 40.408165 24 CGTAAGG 465 0.0 40.161293 2 CTTCGCA 40 3.460591E-7 39.375 24 >>END_MODULE