SRR1547363_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547363_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	740654
Sequences flagged as poor quality	0
Sequence length	51
%GC	41

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11309	1.5268937992638938	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	893	0.1205691186437932	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATTAGCG	40	6.8102963E-9	45.0	1
CGAGTAG	20	7.03166E-4	45.0	1
CGACGGT	40	6.8102963E-9	45.0	28
CGGTTTA	25	3.8894577E-5	45.0	19
CCGGATT	20	7.03166E-4	45.0	20
CGACATC	20	7.03166E-4	45.0	29
TTCCGCG	20	7.03166E-4	45.0	1
TATTGCG	50	2.1827873E-11	45.0	1
CTAGTCG	25	3.8894577E-5	45.0	1
GGCGACT	25	3.8894577E-5	45.0	39
TATCGCG	25	3.8894577E-5	45.0	1
TCGCGAG	20	7.03166E-4	45.0	1
TCGCGAA	20	7.03166E-4	45.0	35
AATCGGT	20	7.03166E-4	45.0	26
TAACGGA	30	2.1644519E-6	44.999996	17
CGTTTTT	4670	0.0	43.602783	1
ACGGGAG	400	0.0	41.625	5
CGCCGGT	60	3.6379788E-12	41.249996	28
TAAACGG	50	1.0804797E-9	40.5	2
ACTACGG	50	1.0804797E-9	40.5	2