##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547362_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3713719 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.357477773628 31.0 31.0 33.0 30.0 34.0 2 31.760146096137053 31.0 31.0 34.0 30.0 34.0 3 31.68132645469407 31.0 31.0 34.0 30.0 34.0 4 35.55448621718552 37.0 35.0 37.0 33.0 37.0 5 35.49015474784172 37.0 35.0 37.0 33.0 37.0 6 35.544202186541305 37.0 35.0 37.0 33.0 37.0 7 35.95038127548153 37.0 35.0 37.0 35.0 37.0 8 35.940168332606746 37.0 35.0 37.0 35.0 37.0 9 37.63908066280728 39.0 37.0 39.0 35.0 39.0 10 37.037891127465485 39.0 37.0 39.0 33.0 39.0 11 36.78583759298967 39.0 37.0 39.0 32.0 39.0 12 36.52656918846041 39.0 35.0 39.0 32.0 39.0 13 36.42675872891837 39.0 35.0 39.0 32.0 39.0 14 37.54169041868811 40.0 36.0 41.0 32.0 41.0 15 37.642135821261654 40.0 36.0 41.0 32.0 41.0 16 37.67640308811733 40.0 36.0 41.0 32.0 41.0 17 37.57731912403712 40.0 36.0 41.0 32.0 41.0 18 37.31323856220678 39.0 36.0 41.0 32.0 41.0 19 37.13856514184299 38.0 36.0 41.0 32.0 41.0 20 36.84440152849475 38.0 35.0 40.0 32.0 41.0 21 36.74222147663838 38.0 35.0 40.0 31.0 41.0 22 36.679279450060704 38.0 35.0 40.0 31.0 41.0 23 36.5922284373158 38.0 35.0 40.0 31.0 41.0 24 36.45253262295828 38.0 35.0 40.0 31.0 41.0 25 36.35746754129755 38.0 35.0 40.0 31.0 41.0 26 36.22032900173654 38.0 35.0 40.0 30.0 41.0 27 36.14384475508244 38.0 35.0 40.0 30.0 41.0 28 36.12880134442051 38.0 35.0 40.0 30.0 41.0 29 36.070169283136394 38.0 35.0 40.0 30.0 41.0 30 35.948939324703886 38.0 35.0 40.0 30.0 41.0 31 35.74908844745658 38.0 35.0 40.0 29.0 41.0 32 35.46803029523774 38.0 34.0 40.0 27.0 41.0 33 35.049238781932615 38.0 34.0 40.0 24.0 41.0 34 34.57659235930344 38.0 34.0 40.0 22.0 41.0 35 34.26740149160451 38.0 33.0 40.0 20.0 41.0 36 34.076253749947156 38.0 33.0 40.0 18.0 41.0 37 33.96994737620159 38.0 33.0 40.0 18.0 41.0 38 33.86060442375958 38.0 33.0 40.0 18.0 41.0 39 33.79393944452986 37.0 33.0 40.0 18.0 41.0 40 33.645286032680445 37.0 33.0 40.0 18.0 41.0 41 33.529743095802345 37.0 33.0 40.0 16.0 41.0 42 33.43805468318955 37.0 33.0 40.0 16.0 41.0 43 33.38013269178417 37.0 33.0 40.0 15.0 41.0 44 33.23457348280793 37.0 32.0 40.0 15.0 41.0 45 33.157283036223255 37.0 32.0 40.0 15.0 41.0 46 33.077338107702815 36.0 32.0 40.0 15.0 41.0 47 32.9598752625064 36.0 32.0 40.0 15.0 41.0 48 32.889269220422975 36.0 32.0 40.0 15.0 41.0 49 32.760809312713214 36.0 31.0 40.0 15.0 41.0 50 32.69556474251283 36.0 31.0 40.0 14.0 41.0 51 32.28551083159496 35.0 31.0 39.0 13.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 5.0 11 5.0 12 12.0 13 27.0 14 69.0 15 169.0 16 438.0 17 1068.0 18 2317.0 19 4517.0 20 7958.0 21 12670.0 22 19413.0 23 29070.0 24 43356.0 25 67041.0 26 94235.0 27 107112.0 28 104438.0 29 100182.0 30 105445.0 31 119477.0 32 141514.0 33 175376.0 34 254637.0 35 324551.0 36 311893.0 37 360472.0 38 511878.0 39 814110.0 40 264.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.274751266856754 21.92853040308112 25.95333680334996 22.84338152671217 2 38.89351886882125 23.030983227325493 26.400570425495307 11.674927478357947 3 26.076959511476232 23.361972190141472 38.358502622303945 12.202565676078345 4 23.6435228405811 25.17102128620932 37.83379948779108 13.351656385418497 5 20.899481086210344 29.079798444631916 36.79195975785998 13.228760711297758 6 19.87899461429365 36.624311101620776 33.87194884696446 9.624745437121119 7 79.37611865625806 3.233766475061791 15.62921158008993 1.7609032885902245 8 79.77795304383557 3.0172719045248173 15.391929222431747 1.8128458292078642 9 74.66720018396653 5.71561822528845 16.870097064425178 2.7470845263198425 10 33.63493576116017 33.71628278822388 22.58959280440981 10.059188646206135 11 26.711310144897876 23.328151645291417 33.93584705789534 16.02469115191537 12 25.44931374721674 21.13172806020057 36.273288312874506 17.145669879708183 13 22.630979888354506 22.561507750047863 37.16113146955922 17.64638089203841 14 18.01005945791806 26.537225891350424 37.714996745849646 17.737717904881872 15 17.77218470218129 26.886067578080088 39.77094120475997 15.57080651497865 16 22.064243417447578 25.698390212075818 37.19352487358359 15.043841496893007 17 21.364190451673913 26.250020531978862 34.72414041019258 17.66164860615464 18 21.31259796446635 26.869830485289814 35.97498895312219 15.842582597121647 19 22.823078428927985 27.980926936044437 33.19618420241273 15.999810432614852 20 23.07457834047218 28.04288638962722 33.653488591894 15.229046678006602 21 23.125336084932652 26.361472152308778 35.5034939369403 15.009697825818268 22 21.84696795853429 23.81873803591494 36.53911348704627 17.7951805185045 23 19.736576730765037 26.014299951073305 36.07669293234087 18.17243038582079 24 19.78065653324875 26.416053557094653 36.84683736168515 16.956452547971455 25 20.39917398166097 27.552892397082278 34.311212022234315 17.736721599022435 26 18.55552345236675 29.458421598403113 33.83861299145143 18.147441957778714 27 18.138152078819104 28.097817847823165 35.70245890978828 18.061571163569457 28 17.72137310335004 27.6856972754266 36.434743716473974 18.15818590474939 29 19.0597349987977 27.06133662778471 36.495545301084974 17.383383072332613 30 19.474359799435554 26.308075543680072 36.385386185653786 17.83217847123059 31 20.835717511206422 26.615449364908866 34.579649133388926 17.96918399049578 32 21.37248402477409 26.621507981621654 34.109042714324914 17.896965279279343 33 21.06195972285464 26.977269954996597 33.57701538538592 18.383754936762852 34 18.989805098339428 27.694421683493015 34.58481915298384 18.730954065183713 35 19.167982284066188 28.457645826192017 33.46987211471843 18.904499775023368 36 20.918383970354245 29.47724370099084 31.304603283124006 18.29976904553091 37 20.083048825180366 30.03854088044895 30.966963305516654 18.91144698885403 38 20.046885615201365 30.357493391395522 30.251427208143646 19.344193785259467 39 19.785611135360536 29.21510755121753 30.689828713481017 20.309452599940922 40 21.16169801753983 28.22157519187639 30.896037099198942 19.720689691384834 41 18.83699332125021 28.486269424261774 31.681179970805545 20.995557283682476 42 19.498648120657485 29.136345533951275 30.413178810782398 20.95182753460884 43 19.770693474654383 28.333619210284894 31.183350167312067 20.71233714774866 44 19.670847471227628 29.6132259872112 30.38638626131918 20.32954028024199 45 19.25323375301147 29.633609866551563 30.015221937901064 21.097934442535905 46 19.622755518120787 30.08445173153919 30.076131231253626 20.216661519086394 47 19.260100185285964 29.25824490221258 31.790100435708784 19.69155447679267 48 19.517470223245216 28.613015685893306 31.890942744994977 19.978571345866502 49 19.878725342439747 28.30494175784436 31.918193056609827 19.898139843106062 50 18.63275062006576 28.841896761709755 32.18991528438204 20.33543733384244 51 18.174719196578955 29.38779159112469 31.903760085240695 20.533729127055654 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 4928.0 1 5846.5 2 6765.0 3 75040.0 4 143315.0 5 96238.0 6 49161.0 7 48946.5 8 48732.0 9 51411.5 10 54091.0 11 55076.0 12 56061.0 13 55264.5 14 54468.0 15 50917.5 16 47367.0 17 44146.0 18 40925.0 19 37964.0 20 35003.0 21 34590.5 22 34178.0 23 34902.0 24 35626.0 25 38626.5 26 45335.0 27 49043.0 28 57040.5 29 65038.0 30 72952.0 31 80866.0 32 90120.0 33 99374.0 34 110795.0 35 122216.0 36 130485.5 37 138755.0 38 147346.0 39 155937.0 40 170571.0 41 185205.0 42 200493.5 43 215782.0 44 221808.5 45 227835.0 46 240776.0 47 253717.0 48 254187.0 49 254657.0 50 241709.0 51 228761.0 52 209543.0 53 190325.0 54 177254.5 55 164184.0 56 154679.0 57 145174.0 58 135511.5 59 125849.0 60 117585.0 61 109321.0 62 98027.0 63 86733.0 64 73543.0 65 60353.0 66 50078.0 67 39803.0 68 32454.0 69 25105.0 70 20448.5 71 15792.0 72 12997.5 73 10203.0 74 7696.0 75 4348.5 76 3508.0 77 2604.0 78 1700.0 79 1071.0 80 442.0 81 343.0 82 244.0 83 205.0 84 166.0 85 108.0 86 50.0 87 62.0 88 74.0 89 52.5 90 31.0 91 30.5 92 30.0 93 19.0 94 8.0 95 5.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3713719.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.45777376658244 #Duplication Level Percentage of deduplicated Percentage of total 1 80.10440555356104 19.591754287355663 2 6.644867073943028 3.250373112070225 3 2.4947198829191404 1.8304588352229416 4 1.4938595185377317 1.4614591257380645 5 1.0583748477740564 1.29427462935495 6 0.7952363793959156 1.1669826874932854 7 0.6222385932953023 1.0652999520557105 8 0.5112057597783508 1.0002363856666237 9 0.4131411271582949 0.90940609995376 >10 3.9465066218704594 22.164026886439643 >50 1.341196594659346 23.589623631111152 >100 0.5686471910484411 18.348490979090716 >500 0.0032484965141299435 0.5190615551881997 >1k 0.002016308181183884 0.8664541720880704 >5k 2.2403424235376484E-4 0.2976672541496517 >10k+ 1.1201712117688242E-4 2.6444304070213374 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 96523 2.599092715415464 No Hit CGTTTCTGTCTCTTATACACATCTGACGCTTCTCTGCTCGTATGCCGTCTT 5780 0.1556391315551877 No Hit CGTTCTGTCTCTTATACACATCTGACGCTTCTCTGCTCGTATGCCGTCTTC 5085 0.1369247377090189 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCTTCTCTGCTCGTATGCCGTCT 4080 0.10986291639189717 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3764 0.10135392580860318 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.6927185390170878E-5 0.0 0.0 0.02789656406421703 0.0 2 2.6927185390170878E-5 0.0 0.0 0.12550761110358646 0.0 3 2.6927185390170878E-5 0.0 0.0 0.24089060050046868 0.0 4 2.6927185390170878E-5 0.0 0.0 0.34641824004454835 0.0 5 2.6927185390170878E-5 0.0 0.0 0.7036073542451651 0.0 6 2.6927185390170878E-5 0.0 0.0 1.3305260844991234 0.0 7 2.6927185390170878E-5 0.0 0.0 1.708502985820952 0.0 8 2.6927185390170878E-5 0.0 0.0 2.153501651578916 0.0 9 2.6927185390170878E-5 0.0 0.0 2.45829046301026 0.0 10 2.6927185390170878E-5 0.0 0.0 2.817122135519677 0.0 11 2.6927185390170878E-5 0.0 0.0 3.1361015736516413 0.0 12 2.6927185390170878E-5 0.0 0.0 3.373060805085145 0.0 13 2.6927185390170878E-5 0.0 0.0 3.5193562033099437 0.0 14 2.6927185390170878E-5 0.0 0.0 3.6202523669669135 0.0 15 2.6927185390170878E-5 0.0 0.0 3.6966717191042187 0.0 16 2.6927185390170878E-5 0.0 0.0 3.7912399941944988 0.0 17 2.6927185390170878E-5 0.0 0.0 3.9037417747546326 0.0 18 2.6927185390170878E-5 0.0 0.0 4.041258910542235 0.0 19 2.6927185390170878E-5 0.0 0.0 4.1389238119523855 0.0 20 2.6927185390170878E-5 0.0 0.0 4.242216495109081 0.0 21 2.6927185390170878E-5 0.0 0.0 4.364115863370384 0.0 22 2.6927185390170878E-5 0.0 0.0 4.501471436045646 0.0 23 2.6927185390170878E-5 0.0 0.0 4.649382465393854 0.0 24 2.6927185390170878E-5 0.0 0.0 4.772708974480837 0.0 25 2.6927185390170878E-5 0.0 0.0 4.879690682035986 0.0 26 2.6927185390170878E-5 0.0 0.0 4.984437433203751 0.0 27 2.6927185390170878E-5 0.0 0.0 5.098339427404174 0.0 28 2.6927185390170878E-5 0.0 0.0 5.223281567614566 0.0 29 2.6927185390170878E-5 0.0 0.0 5.360664067475218 0.0 30 2.6927185390170878E-5 0.0 0.0 5.523842810939653 0.0 31 8.078155617051264E-5 0.0 0.0 5.671807694658643 0.0 32 8.078155617051264E-5 0.0 0.0 5.819826432748412 0.0 33 8.078155617051264E-5 0.0 0.0 5.960467122041274 0.0 34 8.078155617051264E-5 0.0 0.0 6.097822694716537 0.0 35 8.078155617051264E-5 0.0 0.0 6.24963816594632 0.0 36 8.078155617051264E-5 0.0 0.0 6.392810010665858 0.0 37 8.078155617051264E-5 0.0 0.0 6.55695813280434 0.0 38 8.078155617051264E-5 0.0 0.0 6.738043454553239 0.0 39 1.0770874156068351E-4 0.0 0.0 6.987389191266221 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 46400 0.0 43.855606 1 GCGTAAG 230 0.0 43.04348 1 GTTTTTT 53605 0.0 38.47309 2 GGGCGAT 3975 0.0 38.37736 7 TCGACGG 135 0.0 38.333336 2 ACGGGAC 1215 0.0 37.592594 5 CGTAGTA 30 1.14041235E-4 37.500004 20 CGGTCTA 495 0.0 37.272728 31 CGACGGT 505 0.0 36.980198 28 GTAGGGA 5190 0.0 36.979767 4 GCGATCG 300 0.0 36.750004 9 TAGGGAC 3900 0.0 36.576927 5 AGGGCGA 2130 0.0 36.549297 6 AGGGATT 5415 0.0 36.44044 6 CGGGATC 960 0.0 36.32813 6 TAAGGGA 4935 0.0 36.291794 4 TATGGGA 4065 0.0 36.254616 4 TAGGGAG 4970 0.0 36.217304 5 CGAGGGA 2410 0.0 36.130707 4 AATGCGG 480 0.0 36.093754 2 >>END_MODULE