##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547361_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2225825 Sequences flagged as poor quality 0 Sequence length 51 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.32542899823661 31.0 31.0 33.0 30.0 34.0 2 31.713925847719384 31.0 31.0 34.0 30.0 34.0 3 31.594556175799983 31.0 31.0 34.0 30.0 34.0 4 35.4903835656442 37.0 35.0 37.0 33.0 37.0 5 35.434550335268945 37.0 35.0 37.0 33.0 37.0 6 35.48689587007065 37.0 35.0 37.0 33.0 37.0 7 35.939783675715745 37.0 35.0 37.0 35.0 37.0 8 35.94375793245201 37.0 35.0 37.0 35.0 37.0 9 37.66061437893815 39.0 37.0 39.0 35.0 39.0 10 37.0265209529051 39.0 37.0 39.0 33.0 39.0 11 36.71893522626442 39.0 37.0 39.0 32.0 39.0 12 36.49219772443925 39.0 35.0 39.0 32.0 39.0 13 36.405873777138815 39.0 35.0 39.0 32.0 39.0 14 37.46560174317388 40.0 36.0 41.0 32.0 41.0 15 37.58922017678838 40.0 36.0 41.0 32.0 41.0 16 37.63397796322712 40.0 36.0 41.0 32.0 41.0 17 37.55289791425651 40.0 36.0 41.0 32.0 41.0 18 37.28092909370683 39.0 36.0 40.0 32.0 41.0 19 37.05982141453169 38.0 36.0 40.0 32.0 41.0 20 36.72501971179226 38.0 35.0 40.0 31.0 41.0 21 36.60799119427628 38.0 35.0 40.0 31.0 41.0 22 36.576481978592206 38.0 35.0 40.0 31.0 41.0 23 36.497162175822446 38.0 35.0 40.0 31.0 41.0 24 36.331000864847866 38.0 35.0 40.0 31.0 41.0 25 36.24797726685611 38.0 35.0 40.0 31.0 41.0 26 36.10241281322656 38.0 35.0 40.0 30.0 41.0 27 36.00670942234902 38.0 35.0 40.0 30.0 41.0 28 35.97685487403547 38.0 35.0 40.0 30.0 41.0 29 35.90700976042591 38.0 35.0 40.0 30.0 41.0 30 35.74050116249031 38.0 35.0 40.0 30.0 41.0 31 35.50838408230656 38.0 34.0 40.0 28.0 41.0 32 35.20326440757921 38.0 34.0 40.0 26.0 41.0 33 34.72869834780362 37.0 34.0 40.0 23.0 41.0 34 34.22523468826166 37.0 33.0 40.0 21.0 41.0 35 33.86725461345793 37.0 33.0 40.0 18.0 41.0 36 33.6526753001696 37.0 33.0 40.0 18.0 41.0 37 33.534768456639675 37.0 33.0 40.0 16.0 41.0 38 33.41057001336583 37.0 33.0 40.0 15.0 41.0 39 33.35175137308639 37.0 33.0 40.0 15.0 41.0 40 33.208409466153 37.0 32.0 40.0 15.0 41.0 41 33.09082744600317 37.0 32.0 40.0 15.0 41.0 42 33.01016432109443 37.0 32.0 40.0 15.0 41.0 43 32.95683083800389 36.0 32.0 40.0 15.0 41.0 44 32.82350005054306 36.0 31.0 40.0 13.0 41.0 45 32.75000550357733 36.0 31.0 40.0 13.0 41.0 46 32.70459851965002 36.0 31.0 40.0 13.0 41.0 47 32.565494142621276 36.0 31.0 40.0 12.0 41.0 48 32.48561634450148 35.0 31.0 40.0 12.0 41.0 49 32.36699021711051 35.0 31.0 40.0 12.0 41.0 50 32.29062976649108 35.0 31.0 40.0 12.0 41.0 51 31.920466343939886 35.0 30.0 39.0 10.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 3.0 11 6.0 12 6.0 13 12.0 14 41.0 15 107.0 16 281.0 17 729.0 18 1632.0 19 3131.0 20 5230.0 21 8232.0 22 12966.0 23 18876.0 24 28195.0 25 43656.0 26 61906.0 27 69696.0 28 67478.0 29 64397.0 30 66435.0 31 74309.0 32 86361.0 33 106176.0 34 151669.0 35 196024.0 36 188769.0 37 211160.0 38 296843.0 39 461372.0 40 124.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.480271360057507 21.48569631484955 26.021003448159668 24.01302887693327 2 39.13915065200544 23.02067772623634 26.594049397414445 11.246122224343782 3 25.100266193433896 22.635966439410108 40.61109925533229 11.652668111823704 4 22.39987420394685 24.90505767524401 40.03886199499062 12.656206125818517 5 20.693855087439488 28.041602551862795 39.0190154212483 12.245526939449418 6 18.8856266777487 36.290229465479094 35.63725809531297 9.186885761459235 7 78.10582592971146 3.062504913908326 17.262722810643243 1.5689463457369741 8 79.09323509260612 2.451315804252356 16.959644176878236 1.4958049262632955 9 74.78840429952939 5.013421989599362 17.97221255040266 2.2259611604685903 10 34.67770377275842 32.32855233452765 23.677602686644278 9.31614120606966 11 24.222569159749753 24.39562858715308 35.16785910842047 16.213943144676694 12 23.608280075926906 21.82804128806173 37.849696180068065 16.713982455943302 13 22.230903148270865 22.837374905933753 37.74937382768187 17.18234811811351 14 16.769197937843273 26.50945155167185 39.30493187919086 17.416418631294015 15 17.080453315062954 26.865184819112013 40.61267170599665 15.441690159828378 16 21.37966821290982 25.715858164950074 38.29838374535285 14.606089876787259 17 21.105882088663755 25.86726270034706 35.982972605663065 17.043882605326115 18 20.762009591949052 26.69854997585165 37.025732031943214 15.513708400256085 19 21.820583379196478 28.15504363550594 34.54862803679535 15.475744948502241 20 21.52141340851145 28.70769265328586 34.86513989195018 14.905754046252511 21 21.650489144474523 26.256511630519018 37.678703402109335 14.414295822897127 22 20.64106567227882 23.803443666954948 38.269899924747 17.28559073601923 23 18.706142666202418 26.501229881055338 37.644648613435464 17.147978839306774 24 18.5568946345737 27.36324733525771 37.91416665730684 16.165691372861748 25 19.81939280940775 28.016353486909345 35.446542293306976 16.717711410375927 26 17.959228600631228 29.66360787573147 34.71090494535734 17.666258578279965 27 17.251625801669043 28.61680500488583 37.234778115979466 16.896791077465657 28 16.65876697404333 28.614109375175495 37.48565138768771 17.24147226309346 29 18.689654397807555 27.415228061505285 36.77989060236092 17.115226938326238 30 19.403277436456147 27.245628025563555 36.85797400963688 16.493120528343425 31 21.435467747913695 26.89169184459695 35.199397976031364 16.473442431458 32 21.904911661968036 27.862972156391454 34.156818258398566 16.075297923241944 33 21.431199667539 28.180157918973865 33.38744061190794 17.001201801579192 34 19.262251075443938 29.266676400885068 34.41959722799412 17.051475295676884 35 19.07872361933216 30.33517909089888 33.036739186593735 17.549358103175226 36 20.905372165376882 30.856064605258727 31.704469129423924 16.53409409994047 37 19.65491446991565 31.612682937787113 31.8649938786742 16.86740871362304 38 19.900486336526907 31.4107353453214 31.066593285635662 17.622185032516033 39 19.276987184527087 30.586771197196544 31.296126155470443 18.840115462805926 40 20.423842844787888 29.19847696921366 31.78129457616839 18.59638560983006 41 18.4257073220042 29.331955567036943 32.021205620387946 20.22113149057091 42 19.000954702189077 29.998315231431043 31.59493670886076 19.405793357519123 43 18.932216144575605 29.67479473902935 31.828378241775525 19.56461087461952 44 19.483202857367495 30.503970437927507 30.969236125930834 19.04359057877416 45 18.98922871294913 30.329967540125573 30.705648467422193 19.975155279503106 46 20.05849516471421 30.319140094122403 30.463940336729078 19.15842440443431 47 19.02741680051217 29.73706378533802 31.873035840643354 19.362483573506452 48 18.9483899228376 30.48501117563151 31.904889198387114 18.661709703143778 49 20.00233621241562 29.324632439657204 31.552974739703256 19.12005660822392 50 18.32960812283086 29.516112003414463 32.733076499724824 19.421203374029854 51 17.699909022497277 30.036817809126955 32.8489885772691 19.414284591106668 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2971.0 1 3591.5 2 4212.0 3 57346.0 4 110480.0 5 71531.0 6 32582.0 7 32059.0 8 31536.0 9 33314.0 10 35092.0 11 36494.0 12 37896.0 13 37519.5 14 37143.0 15 35633.5 16 34124.0 17 30888.5 18 27653.0 19 25592.0 20 23531.0 21 22409.0 22 21287.0 23 21422.5 24 21558.0 25 22696.5 26 26068.5 27 28302.0 28 32557.0 29 36812.0 30 42079.0 31 47346.0 32 51915.5 33 56485.0 34 62155.5 35 67826.0 36 75295.0 37 82764.0 38 89254.0 39 95744.0 40 104824.0 41 113904.0 42 123975.0 43 134046.0 44 143908.0 45 153770.0 46 154265.0 47 154760.0 48 151204.0 49 147648.0 50 138119.5 51 128591.0 52 120793.0 53 112995.0 54 106733.5 55 100472.0 56 96409.5 57 92347.0 58 82921.5 59 73496.0 60 63397.0 61 53298.0 62 45850.5 63 38403.0 64 31907.5 65 25412.0 66 20284.0 67 15156.0 68 12141.0 69 9126.0 70 7672.0 71 6218.0 72 4789.0 73 3360.0 74 2577.0 75 1324.0 76 854.0 77 684.5 78 515.0 79 373.5 80 232.0 81 195.0 82 158.0 83 96.5 84 35.0 85 29.0 86 23.0 87 19.5 88 16.0 89 12.0 90 8.0 91 5.0 92 2.0 93 3.0 94 4.0 95 3.5 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2225825.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.590824190425508 #Duplication Level Percentage of deduplicated Percentage of total 1 78.00796500277889 22.303120128473168 2 6.696592830178457 3.8292221656499246 3 3.050095264833707 2.616142124427295 4 1.9280875466414307 2.205024482790959 5 1.2871447624898391 1.8400264805986992 6 0.9696966588682321 1.6634656015046787 7 0.7561508955454163 1.513328412118026 8 0.5660812037028674 1.2947782538058503 9 0.48306201993213876 1.243002715645644 >10 5.201723778029459 33.8073486511066 >50 0.9335129942203365 18.186585617804173 >100 0.11574771930898034 4.479601395307888 >500 0.002547275981695992 0.55076719316355 >1k 0.0014328427397039955 0.7709830345292737 >5k 0.0 0.0 >10k+ 1.592047488559995E-4 3.696603743074234 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 81212 3.648624667258207 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTT 3402 0.15284220457583145 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCT 2927 0.13150180270236878 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.7970864735547494E-4 0.0 0.0 0.04578077791380724 0.0 2 1.7970864735547494E-4 0.0 0.0 0.135185829973156 0.0 3 1.7970864735547494E-4 0.0 0.0 0.21861556950793526 0.0 4 1.7970864735547494E-4 0.0 0.0 0.3251827973897319 0.0 5 1.7970864735547494E-4 0.0 0.0 0.6134803949097526 0.0 6 1.7970864735547494E-4 0.0 0.0 1.1259645300057282 0.0 7 1.7970864735547494E-4 0.0 0.0 1.5006570597418936 0.0 8 1.7970864735547494E-4 0.0 0.0 1.951186638662069 0.0 9 1.7970864735547494E-4 0.0 0.0 2.2222322060359643 0.0 10 1.7970864735547494E-4 0.0 0.0 2.5054081071063536 0.0 11 1.7970864735547494E-4 0.0 0.0 2.76409870497456 0.0 12 1.7970864735547494E-4 0.0 0.0 2.961194163961677 0.0 13 1.7970864735547494E-4 0.0 0.0 3.0767468242112477 0.0 14 1.7970864735547494E-4 0.0 0.0 3.1627374119708422 0.0 15 1.7970864735547494E-4 0.0 0.0 3.225096312603192 0.0 16 1.7970864735547494E-4 0.0 0.0 3.3162085968124178 0.0 17 1.7970864735547494E-4 0.0 0.0 3.4286612828951064 0.0 18 1.7970864735547494E-4 0.0 0.0 3.563577549897229 0.0 19 1.7970864735547494E-4 0.0 0.0 3.6551391057248437 0.0 20 1.7970864735547494E-4 0.0 0.0 3.757033908775398 0.0 21 1.7970864735547494E-4 0.0 0.0 3.870295283771186 0.0 22 1.7970864735547494E-4 0.0 0.0 3.998202913526445 0.0 23 1.7970864735547494E-4 0.0 0.0 4.132490200262824 0.0 24 1.7970864735547494E-4 0.0 0.0 4.246695045657228 0.0 25 1.7970864735547494E-4 0.0 0.0 4.3492637561353655 0.0 26 2.2463580919434366E-4 0.0 0.0 4.450125234463626 0.0 27 2.2463580919434366E-4 1.7970864735547494E-4 0.0 4.568643087394562 0.0 28 2.2463580919434366E-4 1.7970864735547494E-4 0.0 4.686307324250559 0.0 29 2.2463580919434366E-4 1.7970864735547494E-4 0.0 4.817359855334539 0.0 30 2.695629710332124E-4 1.7970864735547494E-4 0.0 4.972762908135186 0.0 31 2.695629710332124E-4 1.7970864735547494E-4 0.0 5.111677692540968 0.0 32 2.695629710332124E-4 1.7970864735547494E-4 0.0 5.249289589253423 0.0 33 2.695629710332124E-4 1.7970864735547494E-4 0.0 5.388114519335527 0.0 34 2.695629710332124E-4 1.7970864735547494E-4 0.0 5.535250974357822 0.0 35 2.695629710332124E-4 1.7970864735547494E-4 0.0 5.693439511192479 0.0 36 2.695629710332124E-4 1.7970864735547494E-4 0.0 5.846236788606472 0.0 37 2.695629710332124E-4 1.7970864735547494E-4 0.0 5.997596396841621 0.0 38 2.695629710332124E-4 1.7970864735547494E-4 0.0 6.194287511372188 0.0 39 2.695629710332124E-4 1.7970864735547494E-4 0.0 6.50954140599553 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTAATC 20 7.034712E-4 45.0 22 GTACGTA 20 7.034712E-4 45.0 23 CGTTTTT 32695 0.0 44.243004 1 TCGATAG 85 0.0 42.352943 1 TATAGCG 135 0.0 41.666664 1 CGGTCTA 185 0.0 41.351353 31 CGACGGT 205 0.0 40.609756 28 CGCATCG 45 1.9297659E-8 40.000004 21 TACGGGA 915 0.0 39.836067 4 GTTTTTT 36670 0.0 39.71707 2 TCGTGCG 80 0.0 39.375 1 GCGGGAT 1280 0.0 38.496094 5 TATCGCG 100 0.0 38.25 1 CATACGA 265 0.0 38.207546 18 GCGCGAC 250 0.0 37.800003 9 ATAGCGG 400 0.0 37.6875 2 AGGGATC 2275 0.0 37.58242 6 CCAATCG 90 0.0 37.500004 24 TAAGGGA 2920 0.0 37.44863 4 TAGGGAC 2285 0.0 37.417942 5 >>END_MODULE