##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547360_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2210204 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.325388968620093 31.0 31.0 33.0 30.0 34.0 2 31.7451864171814 31.0 31.0 34.0 30.0 34.0 3 31.86414421474217 31.0 31.0 34.0 30.0 34.0 4 35.64145255370092 37.0 35.0 37.0 33.0 37.0 5 35.51576053613151 37.0 35.0 37.0 33.0 37.0 6 35.55034286427859 37.0 35.0 37.0 33.0 37.0 7 35.94190355279422 37.0 35.0 37.0 35.0 37.0 8 35.91965130820503 37.0 35.0 37.0 35.0 37.0 9 37.60943424226904 39.0 37.0 39.0 35.0 39.0 10 36.95701256535596 39.0 37.0 39.0 32.0 39.0 11 36.723939962103046 39.0 37.0 39.0 32.0 39.0 12 36.425502351819105 39.0 35.0 39.0 32.0 39.0 13 36.29465243932234 39.0 35.0 39.0 32.0 39.0 14 37.42124301648174 39.0 36.0 41.0 32.0 41.0 15 37.55486778596003 40.0 36.0 41.0 32.0 41.0 16 37.59668881243541 40.0 36.0 41.0 32.0 41.0 17 37.50509229012344 39.0 36.0 41.0 32.0 41.0 18 37.384189875685685 39.0 36.0 41.0 32.0 41.0 19 37.33894382599977 39.0 36.0 41.0 32.0 41.0 20 37.185966544264694 39.0 35.0 41.0 32.0 41.0 21 37.07270279123556 39.0 35.0 41.0 31.0 41.0 22 36.97595425580625 39.0 35.0 41.0 31.0 41.0 23 36.91057658026137 39.0 35.0 41.0 31.0 41.0 24 36.78150161704531 39.0 35.0 41.0 31.0 41.0 25 36.70783556630972 38.0 35.0 40.0 31.0 41.0 26 36.59427591299265 38.0 35.0 40.0 31.0 41.0 27 36.499460683267245 38.0 35.0 40.0 30.0 41.0 28 36.56597264324922 38.0 35.0 40.0 30.0 41.0 29 36.57933159111105 38.0 35.0 41.0 30.0 41.0 30 36.52318654748611 38.0 35.0 41.0 30.0 41.0 31 36.424590671268355 38.0 35.0 41.0 30.0 41.0 32 36.325117048019095 38.0 35.0 41.0 30.0 41.0 33 36.144068149365395 38.0 35.0 41.0 30.0 41.0 34 35.94922369156874 38.0 35.0 41.0 29.0 41.0 35 35.803376520900336 38.0 35.0 40.0 28.0 41.0 36 35.67046978468956 38.0 35.0 40.0 27.0 41.0 37 35.59213493415088 38.0 35.0 40.0 27.0 41.0 38 35.51331234582871 38.0 34.0 40.0 27.0 41.0 39 35.47627277844036 38.0 34.0 40.0 27.0 41.0 40 35.32853845165424 38.0 34.0 40.0 26.0 41.0 41 35.24506516140592 38.0 34.0 40.0 25.0 41.0 42 35.16585844564574 38.0 34.0 40.0 25.0 41.0 43 35.11380487954958 38.0 34.0 40.0 25.0 41.0 44 34.998596509643455 38.0 34.0 40.0 25.0 41.0 45 34.908013920886944 38.0 34.0 40.0 24.0 41.0 46 34.8252754044423 38.0 34.0 40.0 24.0 41.0 47 34.69408977632834 37.0 33.0 40.0 24.0 41.0 48 34.63620869385812 37.0 33.0 40.0 24.0 41.0 49 34.52313768321838 37.0 33.0 40.0 24.0 41.0 50 34.46430691465584 37.0 33.0 40.0 24.0 41.0 51 34.02545285412568 36.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 2.0 10 0.0 11 1.0 12 5.0 13 11.0 14 27.0 15 60.0 16 193.0 17 471.0 18 1071.0 19 1978.0 20 3332.0 21 5429.0 22 7949.0 23 11726.0 24 16715.0 25 23581.0 26 31887.0 27 38489.0 28 42490.0 29 47600.0 30 55426.0 31 67078.0 32 82242.0 33 104303.0 34 152789.0 35 200384.0 36 181035.0 37 226900.0 38 337660.0 39 569199.0 40 170.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.82289779585957 24.15519110453153 27.312094268221394 15.70981683138751 2 30.69920242656334 25.757848596781113 29.6385311039162 13.90441787273935 3 28.177308519937526 25.932040662309902 32.30104551435071 13.589605303401859 4 26.040039742937754 27.552615052728164 32.0110722811107 14.396272923223377 5 23.58298148044253 31.914701086415555 30.232186712176794 14.270130720965124 6 22.28540894867623 40.382335748193384 26.908104410271633 10.424150892858759 7 88.61521379926921 3.114373152885435 6.827062117343015 1.4433509305023426 8 89.028252595688 2.6878061934554456 6.776252327839422 1.5076888830171333 9 83.3895423227901 6.497906980532115 7.895470282381174 2.217080414296599 10 34.41134845471277 42.625748573434855 14.130234132233948 8.832668839618425 11 29.05736303074286 22.64655208297515 30.192326138220725 18.103758748061267 12 28.17233160377956 21.774596372099587 31.63033819502634 18.422733829094508 13 23.635329589485856 25.55062790584037 32.05898641030421 18.755056094369568 14 18.557789235744753 29.94085613816643 31.544644747724643 19.95670987836417 15 17.77528228163554 28.95103800373178 35.60273169354503 17.670948021087646 16 22.534842937574993 27.249158901169302 33.77014067479744 16.445857486458262 17 21.976070987112504 27.15337588747464 29.750964164393874 21.119588961018984 18 22.118727502076734 27.859690779674633 31.67191806729153 18.34966365095711 19 23.98570448700663 28.550577231784942 28.96090134666302 18.502816934545407 20 24.92050507554959 29.094011231542428 29.06247568097786 16.923008011930122 21 25.463486628383624 26.005925244909523 31.813262486177745 16.71732564052911 22 23.878384076763957 23.737130147262427 31.928545962273162 20.455939813700454 23 21.354589893059643 26.478460811762172 31.790278182466412 20.376671112711765 24 20.282109705710425 27.350642746099457 33.94858574140668 18.418661806783447 25 20.529960130377106 29.30679701964163 30.701509905872943 19.461732944108327 26 20.0192832878775 31.504693684383884 28.289832069799893 20.186190957938724 27 18.969063489162085 30.353894934585224 31.877147991769085 18.799893584483605 28 18.24664148648722 29.683051881183818 33.27339919754014 18.796907434788825 29 19.038830804758295 27.59315429706941 33.4622957880811 19.905719110091194 30 19.899158629701148 28.461988124173153 32.79896335360899 18.83988989251671 31 22.58701006784894 28.409232812898722 29.571433225168352 19.432323894083986 32 23.050768164386636 28.287388856413255 29.593784103186856 19.068058876013254 33 21.916438482601606 28.27960676932989 29.539897674603793 20.264057073464713 34 20.182209425012353 28.32448950413627 30.616540373648764 20.876760697202613 35 20.616920429064468 28.15640547207407 30.636764751127043 20.589909347734416 36 23.043529013611412 28.451943802472535 28.95144520596289 19.553081977953166 37 20.624250069224377 29.833807196077828 29.652330735081467 19.889611999616324 38 20.712431974605057 30.50727444163525 28.3549844267769 20.42530915698279 39 20.368708046859023 29.799421229895522 28.77974159851308 21.052129124732378 40 21.694106064417586 28.618625249072032 29.196626193781206 20.490642492729176 41 20.10633407594955 28.062613224842593 29.75983212409352 22.071220575114335 42 20.677910274345717 29.07831132329866 28.542568921239848 21.70120948111577 43 20.42300167767319 28.40389393920199 29.079487685299636 22.093616697825176 44 19.96413000790877 28.859960438041014 29.837064813926677 21.338844740123537 45 20.283014599557326 30.091204250829335 27.872133070069548 21.75364807954379 46 21.442274106824527 29.9309023058505 28.822090630548132 19.804732956776842 47 21.105065414776192 28.53076005653777 29.392716690405045 20.97145783828099 48 20.66863511241496 28.24336577076143 30.70834185441706 20.379657262406546 49 20.546745911237153 28.112970567422735 30.677801687084088 20.662481834256024 50 20.0453442306683 29.044875495655603 30.33267517387535 20.577105099800743 51 19.364094898027513 29.4546114295332 29.484291947711615 21.69700172472767 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2821.0 1 3516.5 2 4212.0 3 17915.0 4 31618.0 5 21463.5 6 11309.0 7 11569.5 8 11830.0 9 12640.0 10 13450.0 11 13753.0 12 14056.0 13 13496.0 14 12936.0 15 12460.5 16 11985.0 17 11193.0 18 10401.0 19 10897.0 20 11393.0 21 12074.5 22 12756.0 23 15245.5 24 17735.0 25 21881.0 26 30103.5 27 34180.0 28 40661.5 29 47143.0 30 52554.0 31 57965.0 32 66531.5 33 75098.0 34 85148.5 35 95199.0 36 99448.0 37 103697.0 38 108440.5 39 113184.0 40 121088.0 41 128992.0 42 142790.0 43 156588.0 44 160336.0 45 164084.0 46 163915.0 47 163746.0 48 157705.5 49 151665.0 50 140484.0 51 129303.0 52 121402.5 53 113502.0 54 107552.0 55 101602.0 56 94725.5 57 87849.0 58 84279.0 59 80709.0 60 71971.0 61 63233.0 62 55688.0 63 48143.0 64 41641.0 65 35139.0 66 28683.0 67 22227.0 68 19359.0 69 16491.0 70 14232.0 71 11973.0 72 9893.5 73 7814.0 74 6086.0 75 3086.5 76 1815.0 77 1418.5 78 1022.0 79 739.0 80 456.0 81 362.5 82 269.0 83 209.5 84 150.0 85 92.5 86 35.0 87 28.5 88 22.0 89 19.5 90 17.0 91 10.5 92 4.0 93 2.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2210204.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.854201633856718 #Duplication Level Percentage of deduplicated Percentage of total 1 81.57777543425125 16.196616023131075 2 6.166060015935879 2.4484439768570545 3 2.059202317216167 1.226514540327443 4 1.0944860770474143 0.869205890365928 5 0.7578740953469638 0.7523492551047686 6 0.5260532267330926 0.626662010021986 7 0.4071672064197442 0.5658785870466232 8 0.3212393743659147 0.5102361049115883 9 0.2602407742957731 0.4650185525597348 >10 3.8169187551240347 19.25284639696418 >50 1.9715302196911606 28.368046285163135 >100 1.037552791628406 27.170443289127803 >500 0.0027527378429807858 0.3470491673410209 >1k 9.175792809935953E-4 0.2744967626724847 >5k 0.0 0.0 >10k+ 2.2939482024839883E-4 0.9261931584051182 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 20336 0.9200960635307872 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 9.048938469028198E-5 0.0 0.0 0.01506648255093195 0.0 2 9.048938469028198E-5 0.0 0.0 0.05230286435098298 0.0 3 9.048938469028198E-5 0.0 0.0 0.07922345629634188 0.0 4 9.048938469028198E-5 0.0 0.0 0.12632318102763365 0.0 5 9.048938469028198E-5 0.0 0.0 0.23509142142535258 0.0 6 9.048938469028198E-5 0.0 0.0 0.3900544927074605 0.0 7 9.048938469028198E-5 0.0 0.0 0.4790055578580077 0.0 8 9.048938469028198E-5 0.0 0.0 0.6758652142517161 0.0 9 9.048938469028198E-5 0.0 0.0 0.7559030750102705 0.0 10 9.048938469028198E-5 0.0 0.0 0.8860720548872412 0.0 11 9.048938469028198E-5 0.0 0.0 1.046781202097182 0.0 12 9.048938469028198E-5 0.0 0.0 1.183510662364198 0.0 13 9.048938469028198E-5 0.0 0.0 1.2462650506469086 0.0 14 9.048938469028198E-5 0.0 0.0 1.2761717922870468 0.0 15 9.048938469028198E-5 0.0 0.0 1.3089289495449288 0.0 16 9.048938469028198E-5 0.0 0.0 1.3751671791382154 0.0 17 9.048938469028198E-5 0.0 0.0 1.461448807440399 0.0 18 9.048938469028198E-5 0.0 0.0 1.5609418859073643 0.0 19 9.048938469028198E-5 0.0 0.0 1.6297590629643237 0.0 20 9.048938469028198E-5 0.0 0.0 1.7069465081051343 0.0 21 9.048938469028198E-5 0.0 0.0 1.8013721810294434 0.0 22 9.048938469028198E-5 0.0 0.0 1.9141219543535348 0.0 23 9.048938469028198E-5 0.0 0.0 2.0272789299087326 0.0 24 9.048938469028198E-5 0.0 0.0 2.1166371972903857 0.0 25 9.048938469028198E-5 0.0 0.0 2.1928292591996033 0.0 26 9.048938469028198E-5 0.0 0.0 2.2740434819591315 0.0 27 9.048938469028198E-5 0.0 0.0 2.3540813427176857 0.0 28 9.048938469028198E-5 0.0 0.0 2.441675067097879 0.0 29 9.048938469028198E-5 0.0 0.0 2.533748016020241 0.0 30 9.048938469028198E-5 0.0 0.0 2.6507055457324302 0.0 31 1.3573407703542297E-4 0.0 0.0 2.755492253203777 0.0 32 1.3573407703542297E-4 0.0 0.0 2.856342672441096 0.0 33 1.3573407703542297E-4 0.0 0.0 2.9636178379914253 0.0 34 1.3573407703542297E-4 0.0 0.0 3.0724313230814895 0.0 35 1.3573407703542297E-4 0.0 0.0 3.1970352058000078 0.0 36 1.3573407703542297E-4 0.0 0.0 3.3161192360524185 0.0 37 1.3573407703542297E-4 0.0 0.0 3.4377369690761577 0.0 38 1.3573407703542297E-4 0.0 0.0 3.558811765791755 0.0 39 1.3573407703542297E-4 0.0 0.0 3.728569851470724 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTAC 20 7.0347026E-4 45.0 33 CGTTTTT 8950 0.0 42.81285 1 CGGTCTA 360 0.0 42.5 31 TAGTACG 90 0.0 42.5 1 TCACGAC 350 0.0 42.42857 25 ATATGCG 130 0.0 41.538464 1 ATACGGG 665 0.0 40.26316 3 CGACGGT 370 0.0 40.135136 28 AATCCCG 45 1.9297659E-8 40.0 16 CACGACG 375 0.0 39.6 26 TACGGGA 1085 0.0 39.19355 4 GTAGGGA 3450 0.0 38.608696 4 GGGCGAT 2490 0.0 38.58434 7 CGTTTGG 350 0.0 38.571426 2 TAGGGAT 4455 0.0 38.434345 5 AGGGCGA 1260 0.0 38.392857 6 ACGGGAT 1150 0.0 38.152172 5 TAGGGAC 2920 0.0 38.14212 5 ATAGGGA 4610 0.0 38.020607 4 TACGCGG 155 0.0 37.741936 2 >>END_MODULE