##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547358_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2399703 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.357910124711267 31.0 31.0 33.0 30.0 34.0 2 31.763377801336247 31.0 31.0 34.0 30.0 34.0 3 31.80583680563803 31.0 31.0 34.0 30.0 34.0 4 35.61839277610604 37.0 35.0 37.0 33.0 37.0 5 35.51960471775049 37.0 35.0 37.0 33.0 37.0 6 35.56468112928975 37.0 35.0 37.0 33.0 37.0 7 35.976183719401945 37.0 35.0 37.0 35.0 37.0 8 35.976423332387384 37.0 35.0 37.0 35.0 37.0 9 37.709531554529875 39.0 38.0 39.0 35.0 39.0 10 37.05166014294269 39.0 37.0 39.0 33.0 39.0 11 36.703866270117594 39.0 37.0 39.0 32.0 39.0 12 36.50842791795485 39.0 35.0 39.0 32.0 39.0 13 36.40602732921533 39.0 35.0 39.0 32.0 39.0 14 37.52981264764848 40.0 36.0 41.0 32.0 41.0 15 37.674791005386915 40.0 36.0 41.0 32.0 41.0 16 37.723629549156705 40.0 36.0 41.0 32.0 41.0 17 37.63064929284999 40.0 36.0 41.0 32.0 41.0 18 37.45986232462934 39.0 36.0 41.0 32.0 41.0 19 37.364590951463576 39.0 36.0 41.0 32.0 41.0 20 37.173051831830854 39.0 35.0 41.0 32.0 41.0 21 37.054227960710136 39.0 35.0 41.0 32.0 41.0 22 36.98419887794448 39.0 35.0 41.0 32.0 41.0 23 36.89012056908709 38.0 35.0 41.0 31.0 41.0 24 36.781277933144224 38.0 35.0 40.0 31.0 41.0 25 36.70052377315026 38.0 35.0 40.0 31.0 41.0 26 36.574386080277435 38.0 35.0 40.0 31.0 41.0 27 36.49817373233271 38.0 35.0 40.0 31.0 41.0 28 36.53495370052044 38.0 35.0 40.0 31.0 41.0 29 36.53537000203775 38.0 35.0 40.0 31.0 41.0 30 36.474577062244784 38.0 35.0 40.0 30.0 41.0 31 36.35241236102968 38.0 35.0 40.0 30.0 41.0 32 36.19996224532786 38.0 35.0 41.0 30.0 41.0 33 35.936147514921636 38.0 35.0 40.0 29.0 41.0 34 35.673367079176046 38.0 35.0 40.0 27.0 41.0 35 35.488500451930925 38.0 35.0 40.0 26.0 41.0 36 35.33109305609903 38.0 34.0 40.0 25.0 41.0 37 35.251170665703214 38.0 34.0 40.0 25.0 41.0 38 35.164919158745896 38.0 34.0 40.0 25.0 41.0 39 35.12391075062206 38.0 34.0 40.0 24.0 41.0 40 34.98712965729509 38.0 34.0 40.0 24.0 41.0 41 34.899055008057246 38.0 34.0 40.0 24.0 41.0 42 34.839009660778856 38.0 34.0 40.0 23.0 41.0 43 34.78403410755414 38.0 34.0 40.0 23.0 41.0 44 34.66729841151176 38.0 34.0 40.0 23.0 41.0 45 34.58294005549853 38.0 34.0 40.0 23.0 41.0 46 34.514512004193854 38.0 33.0 40.0 23.0 41.0 47 34.392127275750376 37.0 33.0 40.0 23.0 41.0 48 34.3359107356202 37.0 33.0 40.0 23.0 41.0 49 34.21829909784669 37.0 33.0 40.0 23.0 41.0 50 34.163551489496825 37.0 33.0 40.0 23.0 41.0 51 33.75754958009387 36.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 2.0 11 3.0 12 2.0 13 9.0 14 16.0 15 81.0 16 181.0 17 458.0 18 957.0 19 1967.0 20 3421.0 21 5652.0 22 8538.0 23 12979.0 24 19334.0 25 28758.0 26 40606.0 27 48270.0 28 50859.0 29 53373.0 30 60199.0 31 72166.0 32 88360.0 33 111987.0 34 165900.0 35 218809.0 36 199622.0 37 242233.0 38 358472.0 39 606333.0 40 155.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.923951839040082 23.024807653280426 28.742181845003316 17.309058662676172 2 32.8095185112491 25.573664741011697 29.124729185236674 12.492087562502526 3 26.955919128325462 25.068935614115578 34.96536863103476 13.0097766265242 4 24.548537881562844 26.814359943709697 34.850521085317645 13.786581089409813 5 22.1663680880509 31.383925427438314 33.39059041889767 13.059116065613118 6 20.19795783061487 40.12963270871437 29.657045059326094 10.015364401344666 7 86.51791492530533 2.784011188051188 9.533221402815265 1.164852483828207 8 87.41385913173421 2.104843807754543 9.266771763005673 1.2145252975055663 9 83.01023084940094 5.005869476347698 10.284105991449776 1.69979368280158 10 37.98470060670008 37.134262031593074 16.698816478539218 8.182220883167625 11 24.510574850304394 25.34734506728541 32.5960337591777 17.5460463232325 12 26.81365152270927 22.357058352637807 32.93361720179539 17.895672922857536 13 22.58196118436323 25.74710287064691 32.7672632821645 18.903672662825358 14 16.8042878639565 30.363340796756933 33.253156744813836 19.57921459447273 15 16.589469613531342 29.540238937901897 36.72792008010992 17.142371368456846 16 21.22646010777167 27.38159680593807 35.651161831276625 15.740781255013642 17 20.84016230341838 27.216701400131598 31.785558462859782 20.15757783359024 18 20.781655063147397 28.58962129896908 32.90936420048648 17.719359437397046 19 22.380644604769838 29.916285473660697 30.015006023662096 17.688063897907366 20 24.04526726849114 29.41922396229867 30.746388198872943 15.789120570337245 21 23.800070258694515 26.98496438934318 33.19910838966322 16.015856962299086 22 22.544623230458104 24.629964624788983 33.49497833690253 19.33043380785039 23 19.59238289071606 27.70480346942934 33.298829063429935 19.403984576424666 24 18.883128453812827 28.17198628330256 35.2658224788651 17.67906278401952 25 20.126282294100562 29.385511457042806 32.30333087052856 18.18487537832807 26 19.081236302992497 31.88052854874124 29.806855265005712 19.231379883260555 27 18.377107500386504 30.78801835060422 33.25519866416802 17.579675484841246 28 17.0677788042937 29.950039650740113 34.86377272520807 18.118408819758113 29 17.859001718129285 28.55970092965671 34.70871186976055 18.872585482453452 30 18.789366850814453 28.97833606908855 34.14518379982856 18.087113280268433 31 21.276799670625905 28.502485515915925 31.48568802055921 18.735026792898953 32 21.507869932237448 28.862780102370998 31.464685421487577 18.164664543903974 33 20.947467249072073 29.088474698743973 30.865652957886873 19.098405094297085 34 18.9255920420152 29.029217365649 31.866776846968147 20.178413745367656 35 19.289053687060438 29.07455630967666 31.373174096961165 20.26321590630174 36 21.09840259398767 29.71438548853754 30.3557148530464 18.83149706442839 37 19.495329213656856 31.395843568974996 30.68508894642379 18.423738270944362 38 19.57667261323589 30.82339772880227 29.73863848984645 19.86129116811539 39 19.112781873423504 29.899616744238767 30.3332954119739 20.654305970363833 40 20.711771415045945 28.51648724863035 31.233781847170256 19.53795948915345 41 18.4197377758831 29.057929252078278 31.29420599132476 21.228126980713864 42 19.504830389427358 30.642833717339187 29.441435044253396 20.410900848980063 43 19.463741971402293 30.145147128623833 29.96837525310424 20.422735646869633 44 19.61359384890547 30.570908149883547 29.604538561647004 20.21095943956398 45 19.239422545206637 30.875737539187142 28.81198214945766 21.072857766148562 46 19.93409184386568 31.00271158555871 29.373593315506124 19.689603255069482 47 19.585882086241504 30.11476836925236 30.424098315499876 19.875251229006256 48 19.777197428181736 29.69825849282182 30.675629442476836 19.848914636519602 49 19.67776845717991 29.068680582555423 30.62241452379732 20.631136436467344 50 18.563047177088166 29.847151918383236 31.571031915199505 20.018768989329097 51 18.206294695635254 30.392511073245316 30.189986010768834 21.211208220350603 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3570.0 1 4165.5 2 4761.0 3 33535.5 4 62310.0 5 40544.0 6 18778.0 7 18909.5 8 19041.0 9 20730.5 10 22420.0 11 23104.5 12 23789.0 13 23776.5 14 23764.0 15 22656.5 16 21549.0 17 20445.0 18 19341.0 19 17948.5 20 16556.0 21 17265.5 22 17975.0 23 19565.0 24 21155.0 25 24487.5 26 31904.0 27 35988.0 28 43949.0 29 51910.0 30 55924.0 31 59938.0 32 68825.5 33 77713.0 34 85793.0 35 93873.0 36 102274.5 37 110676.0 38 116607.5 39 122539.0 40 131526.5 41 140514.0 42 149913.5 43 159313.0 44 159233.5 45 159154.0 46 162861.5 47 166569.0 48 172555.5 49 178542.0 50 170420.0 51 162298.0 52 150222.0 53 138146.0 54 123820.5 55 109495.0 56 101368.0 57 93241.0 58 85682.0 59 78123.0 60 69792.5 61 61462.0 62 52074.5 63 42687.0 64 34204.0 65 25721.0 66 19417.0 67 13113.0 68 9551.5 69 5990.0 70 5167.5 71 4345.0 72 3555.0 73 2765.0 74 2123.5 75 1068.5 76 655.0 77 512.0 78 369.0 79 260.0 80 151.0 81 99.0 82 47.0 83 34.5 84 22.0 85 18.5 86 15.0 87 11.5 88 8.0 89 6.0 90 4.0 91 3.0 92 2.0 93 3.0 94 4.0 95 2.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2399703.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.680566816483577 #Duplication Level Percentage of deduplicated Percentage of total 1 79.96556390096066 16.53733187271604 2 6.851174960612541 2.833723630887338 3 2.6009621066939026 1.6136811190387543 4 1.4757734983602255 1.2207932975533744 5 1.027982681111065 1.0629632261452653 6 0.7368189695635479 0.914270035902692 7 0.5585281742400688 0.8085475458382227 8 0.42213679231299667 0.6984022511299983 9 0.3371049228635208 0.6274368793300125 >10 3.5740425698274763 17.382287186496452 >50 1.358287292850619 20.402524494791177 >100 1.084322298631831 32.784545922601566 >500 0.0060848599763047 0.84395588952513 >1k 0.0010141433293841165 0.38976332631548255 >5k 0.0 0.0 >10k+ 2.0282866587682333E-4 1.8797733217285875 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 44814 1.8674811007862224 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2683 0.11180550259761311 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.167182355483158E-5 0.0 0.0 0.01716879130459061 0.0 2 4.167182355483158E-5 0.0 0.0 0.06959194533656873 0.0 3 4.167182355483158E-5 0.0 0.0 0.11830630707216684 0.0 4 4.167182355483158E-5 0.0 0.0 0.18510624023056185 0.0 5 4.167182355483158E-5 0.0 0.0 0.36362833233946035 0.0 6 4.167182355483158E-5 0.0 0.0 0.6339117799160979 0.0 7 4.167182355483158E-5 0.0 0.0 0.8113087327890159 0.0 8 4.167182355483158E-5 0.0 0.0 1.0903432633121681 0.0 9 4.167182355483158E-5 0.0 0.0 1.223734770511184 0.0 10 4.167182355483158E-5 0.0 0.0 1.396214448204632 0.0 11 4.167182355483158E-5 0.0 0.0 1.6145748036319494 0.0 12 4.167182355483158E-5 0.0 0.0 1.7778866801433344 0.0 13 4.167182355483158E-5 0.0 0.0 1.8511040741291735 0.0 14 4.167182355483158E-5 0.0 0.0 1.8909423374475924 0.0 15 4.167182355483158E-5 0.0 0.0 1.9339476593561786 0.0 16 4.167182355483158E-5 0.0 0.0 2.014249263346339 0.0 17 4.167182355483158E-5 0.0 0.0 2.1150950763490317 0.0 18 4.167182355483158E-5 0.0 0.0 2.225608752416445 0.0 19 4.167182355483158E-5 0.0 0.0 2.3043684989350766 0.0 20 4.167182355483158E-5 0.0 0.0 2.3907958609877973 0.0 21 4.167182355483158E-5 0.0 0.0 2.495100435345541 0.0 22 4.167182355483158E-5 0.0 0.0 2.625408227601499 0.0 23 4.167182355483158E-5 0.0 0.0 2.7470482805580523 0.0 24 4.167182355483158E-5 0.0 0.0 2.851769573151344 0.0 25 4.167182355483158E-5 0.0 0.0 2.9417807120297805 0.0 26 8.334364710966315E-5 0.0 0.0 3.028749807788714 0.0 27 8.334364710966315E-5 0.0 0.0 3.127595373260774 0.0 28 8.334364710966315E-5 0.0 0.0 3.2223571000244613 0.0 29 8.334364710966315E-5 0.0 0.0 3.339163221448654 0.0 30 8.334364710966315E-5 0.0 0.0 3.481430827064849 0.0 31 8.334364710966315E-5 0.0 0.0 3.6009039451965514 0.0 32 8.334364710966315E-5 0.0 0.0 3.713834587030145 0.0 33 8.334364710966315E-5 0.0 0.0 3.8303906775130088 0.0 34 8.334364710966315E-5 0.0 0.0 3.9563229282957098 0.0 35 8.334364710966315E-5 0.0 0.0 4.101465889737188 0.0 36 8.334364710966315E-5 0.0 0.0 4.233232195817566 0.0 37 8.334364710966315E-5 0.0 0.0 4.368415591429439 0.0 38 8.334364710966315E-5 0.0 0.0 4.515933846813543 0.0 39 8.334364710966315E-5 0.0 0.0 4.743545347070033 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCCCGTA 20 7.0348236E-4 45.0 41 CCGTACA 20 7.0348236E-4 45.0 12 CGGTCCA 25 3.8920793E-5 45.0 44 ACGCGTC 20 7.0348236E-4 45.0 34 CGTTTTT 17305 0.0 43.556778 1 CGACGGT 430 0.0 42.906975 28 TACGTAG 200 0.0 41.625 1 CTACGCG 60 3.6379788E-12 41.250004 1 TACGCGG 170 0.0 41.02941 2 CGGTCTA 445 0.0 40.955055 31 AGGGCGA 1360 0.0 40.53309 6 TCTCGCG 140 0.0 40.178574 32 GGCGATA 510 0.0 40.14706 8 CGAAACG 45 1.9297659E-8 40.000004 37 CACGACG 450 0.0 40.0 26 CTACGGG 405 0.0 40.0 3 ATAGGGA 3520 0.0 39.758522 4 CGCATCG 170 0.0 39.705883 21 TCACGAC 455 0.0 39.56044 25 TTAGGGA 3570 0.0 39.516808 4 >>END_MODULE