##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547357_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1518696 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.316941639406437 31.0 31.0 33.0 30.0 34.0 2 31.732422420286877 31.0 31.0 34.0 30.0 34.0 3 31.844348045955215 31.0 31.0 34.0 30.0 34.0 4 35.61618454252859 37.0 35.0 37.0 33.0 37.0 5 35.49049579375991 37.0 35.0 37.0 33.0 37.0 6 35.52180225667283 37.0 35.0 37.0 33.0 37.0 7 35.907691861965795 37.0 35.0 37.0 35.0 37.0 8 35.88847932700158 37.0 35.0 37.0 35.0 37.0 9 37.56579460273814 39.0 37.0 39.0 35.0 39.0 10 36.95566525492923 39.0 37.0 39.0 32.0 39.0 11 36.678086990418095 39.0 35.0 39.0 32.0 39.0 12 36.294334086611144 38.0 35.0 39.0 32.0 39.0 13 36.07962818101845 38.0 35.0 39.0 31.0 39.0 14 37.113755484968685 39.0 35.0 41.0 31.0 41.0 15 37.28389552616192 39.0 35.0 41.0 32.0 41.0 16 37.37756338332359 39.0 35.0 41.0 32.0 41.0 17 37.276001912166755 39.0 35.0 41.0 32.0 41.0 18 37.14517915369501 39.0 35.0 41.0 32.0 41.0 19 37.10851480480623 39.0 35.0 41.0 32.0 41.0 20 36.95365234385289 39.0 35.0 41.0 31.0 41.0 21 36.80843434103994 39.0 35.0 41.0 31.0 41.0 22 36.772507466932154 38.0 35.0 41.0 31.0 41.0 23 36.688185127240736 38.0 35.0 40.0 31.0 41.0 24 36.57301658791489 38.0 35.0 40.0 31.0 41.0 25 36.45931970585291 38.0 35.0 40.0 30.0 41.0 26 36.31829806623577 38.0 35.0 40.0 30.0 41.0 27 36.23095668915965 38.0 35.0 40.0 30.0 41.0 28 36.30790954871811 38.0 35.0 40.0 30.0 41.0 29 36.33189064829301 38.0 35.0 40.0 30.0 41.0 30 36.2752960434478 38.0 35.0 40.0 30.0 41.0 31 36.15469060299099 38.0 35.0 40.0 30.0 41.0 32 36.04232183399443 38.0 35.0 40.0 30.0 41.0 33 35.85083255635097 38.0 35.0 40.0 29.0 41.0 34 35.609835016356136 38.0 34.0 40.0 27.0 41.0 35 35.486751792327105 38.0 34.0 40.0 27.0 41.0 36 35.3540734946296 38.0 34.0 40.0 26.0 41.0 37 35.24459602185033 38.0 34.0 40.0 26.0 41.0 38 35.16870130691066 38.0 34.0 40.0 25.0 41.0 39 35.12720188898898 38.0 34.0 40.0 25.0 41.0 40 34.96045028103057 38.0 34.0 40.0 24.0 41.0 41 34.85815528585049 38.0 34.0 40.0 24.0 41.0 42 34.78296841500867 38.0 34.0 40.0 24.0 41.0 43 34.730793391172426 37.0 33.0 40.0 24.0 41.0 44 34.590852942260994 37.0 33.0 40.0 23.0 41.0 45 34.50317509231604 37.0 33.0 40.0 23.0 41.0 46 34.4335094054373 37.0 33.0 40.0 23.0 41.0 47 34.295425154211244 37.0 33.0 40.0 23.0 41.0 48 34.22982282168387 37.0 33.0 40.0 23.0 41.0 49 34.11533447115157 36.0 33.0 40.0 23.0 41.0 50 34.03570892397162 36.0 33.0 40.0 23.0 41.0 51 33.594644352786865 36.0 32.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 4.0 11 5.0 12 6.0 13 15.0 14 21.0 15 72.0 16 183.0 17 395.0 18 790.0 19 1563.0 20 2538.0 21 4140.0 22 6229.0 23 9052.0 24 12701.0 25 17909.0 26 24386.0 27 28411.0 28 31550.0 29 35230.0 30 40658.0 31 49130.0 32 59814.0 33 75586.0 34 116350.0 35 148123.0 36 121173.0 37 152180.0 38 223041.0 39 357355.0 40 84.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.46858357432956 22.674452293283185 27.780477462243923 15.076486670143332 2 32.249706327006855 24.795021518460576 29.414774253701857 13.540497900830712 3 29.3239068253291 25.098044638294958 31.8057728472321 13.772275689143845 4 26.933105769686627 26.995396050295778 31.100562587904363 14.970935592113236 5 23.649367615375297 31.384622070513124 30.092987668368128 14.873022645743452 6 22.494363585602386 39.80335761732434 27.250944231103524 10.451334565969752 7 86.31325821625921 3.8870847095139514 7.71431543903454 2.0853416351922966 8 86.61344995970227 3.6225814777941077 7.530934433224293 2.233034129279329 9 81.07132698051485 6.462649536181039 9.234303639438044 3.2317198438660535 10 39.662842333159496 33.64761611277043 15.41342046071103 11.27612109335904 11 32.514604634502234 24.386249782708326 25.94949878053277 17.149646802256672 12 32.33879591438971 22.03732675927243 28.676706859042234 16.947170467295628 13 25.946996633954395 25.925925925925924 29.404173053725035 18.722904386394642 14 18.817656726560152 30.530139013996216 30.517101513403606 20.135102746040022 15 18.670820229986777 27.898078351427802 36.042565464056004 17.388535954529413 16 23.49620990639338 24.632447836828437 35.11440077540205 16.756941481376128 17 22.879694158672965 24.49324947191538 29.389818633880644 23.237237735531007 18 23.412453841980224 27.604602896168817 30.97743063786301 18.005512623987947 19 26.514588831471208 27.933042557562544 27.467906677834144 18.084461933132108 20 27.976566738833842 27.67005378298224 27.0918603854886 17.261519092695313 21 26.096598660956506 26.013435210206655 30.306657816969295 17.583308311867548 22 23.66418295695781 23.97056422088423 30.341687869066618 22.023564953091338 23 22.6159152325416 27.16857093190474 30.251676438207515 19.963837397346143 24 23.034563862682194 26.084680541727906 31.449019421925122 19.431736173664778 25 23.104228891101315 27.110824022714226 29.52500039507577 20.259946691108688 26 21.197856582225803 30.441378656426306 27.554823348451567 20.805941412896324 27 20.403622581477794 30.10602516896074 30.510714455032474 18.97963779452899 28 19.01012447520768 28.99843023225188 32.93555787333344 19.055887419207004 29 21.14432381464098 27.677691914642562 31.510256167132855 19.667728103583602 30 21.842488555971702 26.5593640860317 31.58848117068854 20.00966618730806 31 24.24487850102983 26.779355447041407 28.901241591470576 20.074524460458182 32 26.151645885680875 27.24429378888204 27.90295095265939 18.7011093727777 33 24.976953913093862 27.360511912851553 27.963265854390873 19.699268319663712 34 21.318683923576543 27.784362374036675 30.18069449053662 20.716259211850165 35 21.48619605240285 27.74867386231346 29.537576973930268 21.227553111353426 36 24.47494429431565 27.827754863382797 28.12037432112813 19.576926521173426 37 22.040092289701168 29.988687663627218 28.625873775923555 19.345346270748063 38 21.877979529807153 29.89492301290054 26.82064086558469 21.406456591707624 39 21.35358228374869 27.945948366229977 28.47758866817322 22.22288068184811 40 23.804698241122647 26.397317172100276 28.79509789977718 21.0028866869999 41 20.550261540163405 26.254958200982948 29.672100275499506 23.52267998335414 42 21.84696608142775 28.334637083392593 27.460729467911943 22.35766736726771 43 22.036734145609127 27.3083619104811 27.926457961303647 22.72844598260613 44 22.01322713696487 27.925206888014454 28.432154953986842 21.629411021033835 45 21.24434383181361 29.190963826861992 27.03220394338301 22.532488397941393 46 21.88930503537245 29.26767437327813 27.89965865452994 20.943361936819482 47 22.134778783904085 28.207093453857784 28.532306663084643 21.125821099153484 48 22.0309397009013 27.222498775265098 29.523354246011053 21.223207277822553 49 21.563499212482288 26.448216101181536 29.48391251442027 22.504372171915907 50 19.830960244841627 28.62824423057676 29.126566475449987 22.414229049131624 51 19.683465288642363 29.334705563193687 28.290059366719873 22.691769781444084 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1957.0 1 2613.0 2 3269.0 3 10960.0 4 18651.0 5 13222.0 6 7793.0 7 7906.5 8 8020.0 9 8354.0 10 8688.0 11 8600.5 12 8513.0 13 8242.5 14 7972.0 15 7609.0 16 7246.0 17 7358.0 18 7470.0 19 7245.5 20 7021.0 21 7419.5 22 7818.0 23 8761.0 24 9704.0 25 10756.5 26 14814.0 27 17819.0 28 20472.0 29 23125.0 30 25825.5 31 28526.0 32 32493.0 33 36460.0 34 43068.5 35 49677.0 36 52006.5 37 54336.0 38 60811.0 39 67286.0 40 75369.5 41 83453.0 42 94284.0 43 105115.0 44 108832.0 45 112549.0 46 112259.0 47 111969.0 48 112134.0 49 112299.0 50 109618.0 51 106937.0 52 100672.5 53 94408.0 54 86521.0 55 78634.0 56 74237.0 57 69840.0 58 70727.0 59 71614.0 60 65470.5 61 59327.0 62 50321.0 63 41315.0 64 35182.0 65 29049.0 66 23929.5 67 18810.0 68 15044.5 69 11279.0 70 9228.5 71 7178.0 72 6335.0 73 5492.0 74 4231.5 75 2313.5 76 1656.0 77 1284.5 78 913.0 79 645.5 80 378.0 81 285.0 82 192.0 83 138.0 84 84.0 85 65.0 86 46.0 87 28.0 88 10.0 89 9.5 90 9.0 91 6.5 92 4.0 93 3.5 94 3.0 95 2.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1518696.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.25704532237507 #Duplication Level Percentage of deduplicated Percentage of total 1 82.07633620628172 17.447003986314247 2 6.630726207695495 2.818992950344866 3 2.0283225310519333 1.2934843191289636 4 1.0678713766173429 0.9079916100488765 5 0.6836550671494822 0.7266243373633957 6 0.471839854272225 0.6017952700300521 7 0.35259058516999775 0.5246523834440973 8 0.28873789663246524 0.49101716440028487 9 0.2328897329672805 0.4455492847921178 >10 3.449976959039695 18.606891585325755 >50 1.709365514448282 26.563902085701237 >100 1.0036411286391855 28.158158653886968 >500 0.0024904246368208332 0.3336484847476597 >1k 0.0012452123184104166 0.3603165409462529 >5k 0.0 0.0 >10k+ 3.1130307960260416E-4 0.719971343525295 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10880 0.7164040729678619 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.028577147763607726 0.0 2 6.58459625889579E-5 0.0 0.0 0.11299167180265175 0.0 3 6.58459625889579E-5 0.0 0.0 0.15243340339343753 0.0 4 6.58459625889579E-5 0.0 0.0 0.23414824296633427 0.0 5 6.58459625889579E-5 0.0 0.0 0.40119945005452046 0.0 6 6.58459625889579E-5 0.0 0.0 0.5774690919051607 0.0 7 6.58459625889579E-5 0.0 0.0 0.6798595637309903 0.0 8 6.58459625889579E-5 0.0 0.0 0.9076865942887846 0.0 9 6.58459625889579E-5 0.0 0.0 1.002307242529117 0.0 10 6.58459625889579E-5 0.0 0.0 1.2207841463992795 0.0 11 6.58459625889579E-5 0.0 0.0 1.5235438823833078 0.0 12 1.316919251779158E-4 0.0 0.0 1.7727708507825135 0.0 13 1.316919251779158E-4 0.0 0.0 1.8733834816184411 0.0 14 1.316919251779158E-4 0.0 0.0 1.9186855038796442 0.0 15 1.316919251779158E-4 0.0 0.0 1.986243461495915 0.0 16 1.316919251779158E-4 0.0 0.0 2.1196473817011436 0.0 17 1.316919251779158E-4 0.0 0.0 2.2721466310571703 0.0 18 1.316919251779158E-4 0.0 0.0 2.4541448716530496 0.0 19 1.316919251779158E-4 0.0 0.0 2.558444876393959 0.0 20 1.316919251779158E-4 0.0 0.0 2.677033455016672 0.0 21 1.316919251779158E-4 0.0 0.0 2.8222238025253246 0.0 22 1.9753788776687368E-4 0.0 0.0 2.977225198459731 0.0 23 1.9753788776687368E-4 0.0 0.0 3.1364407359998316 0.0 24 1.9753788776687368E-4 0.0 0.0 3.2547000848096 0.0 25 1.9753788776687368E-4 0.0 0.0 3.363740998856914 0.0 26 1.9753788776687368E-4 0.0 0.0 3.4694896147747807 0.0 27 1.9753788776687368E-4 0.0 0.0 3.584259127567334 0.0 28 1.9753788776687368E-4 0.0 0.0 3.695012036641961 0.0 29 1.9753788776687368E-4 0.0 0.0 3.823740893503374 0.0 30 1.9753788776687368E-4 0.0 0.0 3.9793349031010816 0.0 31 1.9753788776687368E-4 0.0 0.0 4.115438507772457 0.0 32 1.9753788776687368E-4 0.0 0.0 4.239623993215232 0.0 33 1.9753788776687368E-4 0.0 0.0 4.374805754410363 0.0 34 1.9753788776687368E-4 0.0 0.0 4.512621354109052 0.0 35 1.9753788776687368E-4 0.0 0.0 4.656692320253692 0.0 36 2.633838503558316E-4 0.0 0.0 4.79575899324157 0.0 37 2.633838503558316E-4 0.0 0.0 4.941410262488345 0.0 38 2.633838503558316E-4 0.0 0.0 5.112017151556335 0.0 39 2.633838503558316E-4 0.0 0.0 5.378693300041615 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATACG 20 7.034004E-4 45.0 1 CGTTATA 20 7.034004E-4 45.0 38 CGCTATT 20 7.034004E-4 45.0 7 TATACGA 20 7.034004E-4 45.0 13 TAGTACG 25 3.8914E-5 45.0 1 CTATGCG 65 0.0 44.999996 1 TCCGATT 30 2.1659653E-6 44.999996 13 ACTCGAT 60 0.0 44.999996 20 GCGATAA 115 0.0 43.04348 9 ACGGGTA 90 0.0 42.5 5 CGTTTTT 6195 0.0 42.16707 1 TACGAAA 215 0.0 41.860466 20 ATACGAG 70 0.0 41.785713 1 CGACGGT 375 0.0 41.4 28 CGGTCTA 370 0.0 41.351353 31 TCGAATA 50 1.0822987E-9 40.5 38 CACGACG 385 0.0 40.324673 26 TCTAGCG 90 0.0 40.0 1 GGGCGAT 1635 0.0 39.770645 7 CGTAAGG 165 0.0 39.545456 2 >>END_MODULE