##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547354_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 4842230 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.326628846626452 31.0 31.0 33.0 30.0 34.0 2 31.735465271166383 31.0 31.0 34.0 30.0 34.0 3 31.717204056808537 31.0 31.0 34.0 30.0 34.0 4 35.570249038149775 37.0 35.0 37.0 33.0 37.0 5 35.49118567271691 37.0 35.0 37.0 33.0 37.0 6 35.54180924904435 37.0 35.0 37.0 33.0 37.0 7 35.93695859139281 37.0 35.0 37.0 35.0 37.0 8 35.92160863899484 37.0 35.0 37.0 35.0 37.0 9 37.624699776755754 39.0 37.0 39.0 35.0 39.0 10 36.941845389417686 39.0 37.0 39.0 32.0 39.0 11 36.74178591268899 39.0 37.0 39.0 32.0 39.0 12 36.508514258926155 39.0 35.0 39.0 32.0 39.0 13 36.42283741168842 39.0 35.0 39.0 32.0 39.0 14 37.51985882537591 40.0 36.0 41.0 32.0 41.0 15 37.608700123703336 40.0 36.0 41.0 32.0 41.0 16 37.635057814271526 40.0 36.0 41.0 32.0 41.0 17 37.53692141843737 40.0 36.0 41.0 32.0 41.0 18 37.31523802049882 39.0 36.0 41.0 32.0 41.0 19 37.16036970569345 39.0 36.0 41.0 32.0 41.0 20 36.90075853480731 38.0 35.0 41.0 31.0 41.0 21 36.790838518616425 38.0 35.0 41.0 31.0 41.0 22 36.734143153051384 38.0 35.0 40.0 31.0 41.0 23 36.64486672462894 38.0 35.0 40.0 31.0 41.0 24 36.50389902999238 38.0 35.0 40.0 31.0 41.0 25 36.42621891153456 38.0 35.0 40.0 31.0 41.0 26 36.30961230672644 38.0 35.0 40.0 30.0 41.0 27 36.220937460632804 38.0 35.0 40.0 30.0 41.0 28 36.24223260770348 38.0 35.0 40.0 30.0 41.0 29 36.20126036970569 38.0 35.0 40.0 30.0 41.0 30 36.09088395222862 38.0 35.0 40.0 30.0 41.0 31 35.9190689000729 38.0 35.0 40.0 29.0 41.0 32 35.67860675763026 38.0 35.0 40.0 28.0 41.0 33 35.30499274094787 38.0 34.0 40.0 25.0 41.0 34 34.8948511326393 38.0 34.0 40.0 23.0 41.0 35 34.62534039068776 38.0 34.0 40.0 22.0 41.0 36 34.44861210640552 38.0 33.0 40.0 21.0 41.0 37 34.357219091203845 38.0 33.0 40.0 21.0 41.0 38 34.245697127150095 38.0 33.0 40.0 20.0 41.0 39 34.18888631890678 38.0 33.0 40.0 20.0 41.0 40 34.03058879896246 38.0 33.0 40.0 18.0 41.0 41 33.92296999522947 38.0 33.0 40.0 18.0 41.0 42 33.847910776646295 37.0 33.0 40.0 18.0 41.0 43 33.79673435586496 37.0 33.0 40.0 18.0 41.0 44 33.66960078311026 37.0 33.0 40.0 18.0 41.0 45 33.5765698861888 37.0 33.0 40.0 18.0 41.0 46 33.52138580777865 37.0 33.0 40.0 18.0 41.0 47 33.391752147254465 37.0 32.0 40.0 18.0 41.0 48 33.33800129279278 36.0 32.0 40.0 18.0 41.0 49 33.213111107898634 36.0 32.0 40.0 18.0 41.0 50 33.14857266176947 36.0 32.0 40.0 18.0 41.0 51 32.74125764368896 35.0 31.0 40.0 17.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 3.0 10 1.0 11 4.0 12 21.0 13 26.0 14 83.0 15 191.0 16 562.0 17 1366.0 18 3026.0 19 5628.0 20 9734.0 21 15189.0 22 22865.0 23 33706.0 24 50028.0 25 77043.0 26 109681.0 27 130353.0 28 131398.0 29 130081.0 30 138101.0 31 156079.0 32 183862.0 33 228049.0 34 326701.0 35 407738.0 36 394608.0 37 478815.0 38 699775.0 39 1107194.0 40 318.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.981475477207812 21.79033214035682 26.827721938032685 21.400470444402682 2 36.83226529925261 23.55584100713927 27.272847427734742 12.33904626587337 3 27.013029120880255 23.5732916445522 37.03023193859028 12.383447295977266 4 24.358446418282487 25.579309533004423 36.619821858936895 13.442422189776199 5 21.412407093425966 29.45269018613325 35.54715492655244 13.587747793888353 6 20.35603430650754 37.861625738554345 32.14436323759921 9.637976717338912 7 82.0219403043639 3.035481585963492 13.466543307525663 1.4760348021469447 8 82.52201981318524 2.568857737034383 13.321341613264961 1.5877808365154071 9 77.66279173025652 5.03439530959909 14.894769558653762 2.4080434014906356 10 32.73983268039726 32.595890736292986 24.472071752064647 10.192204831245109 11 27.188712638598332 22.969891971261173 32.49779543722624 17.343599952914257 12 26.749307653705007 21.108621440947662 34.39177816832327 17.750292737024058 13 23.934509513178845 21.785148578237713 35.0346637809439 19.245678127639536 14 18.886793894548585 25.40519554007141 36.39296357256884 19.315046992811162 15 19.284998853833873 25.677693955057894 37.873314567874715 17.163992623233508 16 23.59617366378714 24.851132639300488 35.74902472621086 15.803668970701516 17 23.220127916269984 24.7440332243615 33.50154784056107 18.53429101880745 18 22.57575538543192 26.073668537017035 34.26780636194481 17.08276971560624 19 23.558133339391148 26.929204106372477 32.402240290114264 17.110422264122107 20 24.47260869475428 27.036055701608557 32.38567767330341 16.10565793033375 21 24.597076140538555 25.097919760110525 34.451729884784484 15.85327421456643 22 23.210359689647124 22.4486032261995 35.82427930932649 18.516757774826885 23 21.415236368367466 24.355988872895338 35.58009429539696 18.648680463340238 24 20.748539412626002 25.259147128492447 35.93693401593894 18.055379442942613 25 22.166460494441612 26.483500370696973 33.04578675527598 18.30425237958544 26 20.656556999564252 27.55019897856979 32.30168744566036 19.49155657620559 27 19.225604731704195 26.95239590023605 34.88485677053754 18.937142597522218 28 18.395615243389926 27.252980548218485 35.34202216747243 19.009382040919164 29 20.11007325137385 26.577899025862052 34.50102535402077 18.811002368743328 30 20.892192233743543 25.80670476206211 35.03807130185885 18.263031702335493 31 22.341441856334786 25.477331725258818 33.24532291939871 18.93590349900769 32 22.856576412107646 26.432242995479356 32.384769001059425 18.32641159135357 33 22.222736218643064 26.63549645514567 32.026607575435285 19.115159750775984 34 20.23228966819007 27.599783570792795 33.131738888900365 19.036187872116773 35 20.244350227064803 28.26363059995085 31.758631870026825 19.73338730295752 36 21.61590837279518 29.438048172019915 30.032010044958625 18.91403341022628 37 20.99363309879952 29.69241444541048 29.829087011562855 19.484865444227143 38 21.078139617490287 29.7079651317678 29.34837874285195 19.86551650788996 39 21.026159434805862 28.478882663566168 29.594959347242906 20.899998554385064 40 21.8384504660043 27.379182731923102 30.643050825755903 20.139315976316695 41 19.948019817315576 27.618411351794524 31.064881263384848 21.368687567505056 42 20.50485003810228 28.327568083300463 29.805523488144924 21.362058390452333 43 20.1771497842936 27.695710447459128 30.52170177789985 21.605437990347422 44 20.76338794315842 27.92688492698612 30.48184410901589 20.82788302083957 45 20.902352841562667 27.8819676058345 29.803499627237862 21.412179925364967 46 20.924429446763167 28.564421764352378 29.76843313927674 20.74271564960772 47 20.75907174999948 28.191329201628175 30.58758051558889 20.46201853278345 48 20.3387901855137 27.513996650303685 31.794916804860566 20.352296359322047 49 21.17774248641638 27.103958300204656 31.16741666546199 20.55088254791697 50 19.982631969154706 27.52393009006181 31.662870206495768 20.830567734287715 51 19.334314974712065 27.7471123841701 31.91133011030042 21.007242530817415 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 5021.0 1 6687.0 2 8353.0 3 87087.0 4 165821.0 5 111831.5 6 57842.0 7 56119.0 8 54396.0 9 55700.0 10 57004.0 11 55999.0 12 54994.0 13 52423.0 14 49852.0 15 46718.0 16 43584.0 17 40934.0 18 38284.0 19 36210.5 20 34137.0 21 33910.5 22 33684.0 23 34508.0 24 35332.0 25 39929.0 26 52506.5 27 60487.0 28 68361.0 29 76235.0 30 85491.5 31 94748.0 32 107673.5 33 120599.0 34 133340.5 35 146082.0 36 163665.5 37 181249.0 38 188823.0 39 196397.0 40 219612.0 41 242827.0 42 260638.5 43 278450.0 44 299143.5 45 319837.0 46 326517.0 47 333197.0 48 332951.0 49 332705.0 50 313527.5 51 294350.0 52 280192.5 53 266035.0 54 254404.5 55 242774.0 56 237242.5 57 231711.0 58 219232.0 59 206753.0 60 190839.0 61 174925.0 62 152556.5 63 130188.0 64 109904.5 65 89621.0 66 72202.5 67 54784.0 68 45289.5 69 35795.0 70 28997.0 71 22199.0 72 17537.0 73 12875.0 74 10164.0 75 5515.5 76 3578.0 77 2773.5 78 1969.0 79 1430.0 80 891.0 81 611.0 82 331.0 83 253.5 84 176.0 85 124.0 86 72.0 87 60.0 88 48.0 89 38.0 90 28.0 91 22.5 92 17.0 93 11.5 94 6.0 95 6.5 96 7.0 97 4.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 4842230.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.14867359766896 #Duplication Level Percentage of deduplicated Percentage of total 1 81.43055568497462 18.035787987433093 2 6.065307173412996 2.6867701770704917 3 2.1828218213173107 1.4503982412667915 4 1.1317749021616685 1.0026925157605007 5 0.8102778431280655 0.8973289735433367 6 0.6358686211305128 0.8450187924251732 7 0.5173377893345076 0.8020842084996742 8 0.3855184076067654 0.6830977100780277 9 0.32418446365581616 0.6462230283853242 >10 4.119865812793923 22.56544055916864 >50 1.7339975449198723 27.62839603826126 >100 0.6555783427826827 18.89184520601755 >500 0.004165891539784087 0.6367817277976336 >1k 0.002651021888328031 0.994680487693114 >5k 0.0 0.0 >10k+ 9.467935315457254E-5 2.2334543465992622 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 106506 2.1995237731375834 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.130328381757992E-5 0.0 0.0 0.025215654770632537 0.0 2 4.130328381757992E-5 0.0 0.0 0.07639042342061406 0.0 3 4.130328381757992E-5 0.0 0.0 0.12795757326686258 0.0 4 4.130328381757992E-5 0.0 0.0 0.2093456940294038 0.0 5 4.130328381757992E-5 0.0 0.0 0.4003940333276197 0.0 6 4.130328381757992E-5 0.0 0.0 0.7823874537145076 0.0 7 4.130328381757992E-5 0.0 0.0 1.0440024534150587 0.0 8 4.130328381757992E-5 0.0 0.0 1.4191395286882285 0.0 9 4.130328381757992E-5 0.0 0.0 1.6617550178326927 0.0 10 4.130328381757992E-5 0.0 0.0 1.9491845699192314 0.0 11 4.130328381757992E-5 0.0 0.0 2.174163556873589 0.0 12 4.130328381757992E-5 0.0 0.0 2.3355974416746004 0.0 13 4.130328381757992E-5 0.0 0.0 2.428467875338429 0.0 14 4.130328381757992E-5 0.0 0.0 2.4969074166241585 0.0 15 4.130328381757992E-5 0.0 0.0 2.5484539148284986 0.0 16 4.130328381757992E-5 0.0 0.0 2.620073808968182 0.0 17 4.130328381757992E-5 0.0 0.0 2.7017923560012638 0.0 18 4.130328381757992E-5 0.0 0.0 2.8038940735983213 0.0 19 4.130328381757992E-5 0.0 0.0 2.8766498080429885 0.0 20 4.130328381757992E-5 0.0 0.0 2.9571086049196342 0.0 21 4.130328381757992E-5 0.0 0.0 3.052973526660237 0.0 22 4.130328381757992E-5 0.0 0.0 3.164802167596335 0.0 23 4.130328381757992E-5 0.0 0.0 3.2826197846859815 0.0 24 4.130328381757992E-5 0.0 0.0 3.3796825016572942 0.0 25 4.130328381757992E-5 0.0 0.0 3.4696410538119835 0.0 26 4.130328381757992E-5 0.0 0.0 3.5565431629641715 0.0 27 4.130328381757992E-5 0.0 0.0 3.6532961053068522 0.0 28 4.130328381757992E-5 0.0 0.0 3.756306495147897 0.0 29 4.130328381757992E-5 0.0 0.0 3.8754045140358886 0.0 30 4.130328381757992E-5 0.0 0.0 4.014844400204038 0.0 31 4.130328381757992E-5 0.0 0.0 4.135222820890375 0.0 32 4.130328381757992E-5 0.0 0.0 4.255188208738535 0.0 33 4.130328381757992E-5 0.0 0.0 4.372097153584196 0.0 34 6.195492572636988E-5 0.0 0.0 4.502099239400028 0.0 35 6.195492572636988E-5 0.0 0.0 4.636500124942433 0.0 36 6.195492572636988E-5 0.0 0.0 4.764932685973198 0.0 37 6.195492572636988E-5 0.0 0.0 4.9020802398894725 0.0 38 6.195492572636988E-5 0.0 0.0 5.087531984230406 0.0 39 6.195492572636988E-5 0.0 0.0 5.366494363134341 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 51180 0.0 43.821808 1 CGTTAGG 595 0.0 38.94958 2 GTTTTTT 60090 0.0 38.020466 2 TACGCGG 215 0.0 37.67442 2 GGGCGAT 5535 0.0 37.601624 7 CGGTCTA 575 0.0 37.565216 31 GCGATCG 240 0.0 37.499996 9 TAGGGAT 6770 0.0 37.189808 5 AGGGCGA 2755 0.0 37.15971 6 TAGGGAC 5015 0.0 37.058823 5 AGGGATT 7265 0.0 36.854782 6 ACGGGTA 595 0.0 36.68067 5 ACGGGAC 1775 0.0 36.633804 5 ATAGCGG 585 0.0 36.53846 2 GTAGGGA 7200 0.0 36.4375 4 TAAGGGA 6065 0.0 36.319046 4 CGACGGT 590 0.0 36.228813 28 GTAGGGT 2650 0.0 36.0 4 TAGGGTG 2280 0.0 35.921055 5 AAGGGAT 6745 0.0 35.859898 5 >>END_MODULE