##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547353_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1594291 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.320761391740906 31.0 31.0 33.0 30.0 34.0 2 31.740687239657 31.0 31.0 34.0 30.0 34.0 3 31.871175964739184 31.0 31.0 34.0 30.0 34.0 4 35.637902365377464 37.0 35.0 37.0 33.0 37.0 5 35.518601685639574 37.0 35.0 37.0 33.0 37.0 6 35.556316883178795 37.0 35.0 37.0 33.0 37.0 7 35.91462286370556 37.0 35.0 37.0 35.0 37.0 8 35.88671139710379 37.0 35.0 37.0 35.0 37.0 9 37.591797231496635 39.0 37.0 39.0 35.0 39.0 10 36.95672057359666 39.0 37.0 39.0 32.0 39.0 11 36.69958997447768 39.0 35.0 39.0 32.0 39.0 12 36.361348712374344 38.0 35.0 39.0 32.0 39.0 13 36.1850985798703 38.0 35.0 39.0 32.0 39.0 14 37.27976887531825 39.0 36.0 41.0 32.0 41.0 15 37.43158808523663 39.0 36.0 41.0 32.0 41.0 16 37.50616731826248 39.0 36.0 41.0 32.0 41.0 17 37.4118840286999 39.0 35.0 41.0 32.0 41.0 18 37.29966298498831 39.0 36.0 41.0 32.0 41.0 19 37.26935735069696 39.0 35.0 41.0 32.0 41.0 20 37.124861145173625 39.0 35.0 41.0 32.0 41.0 21 37.002862087285195 39.0 35.0 41.0 31.0 41.0 22 36.92721215888442 39.0 35.0 41.0 31.0 41.0 23 36.86061515745871 39.0 35.0 41.0 31.0 41.0 24 36.74313785877233 38.0 35.0 40.0 31.0 41.0 25 36.64828378257169 38.0 35.0 40.0 31.0 41.0 26 36.54000242113893 38.0 35.0 40.0 30.0 41.0 27 36.462239327701155 38.0 35.0 40.0 30.0 41.0 28 36.54440061444241 38.0 35.0 40.0 30.0 41.0 29 36.580531408632424 38.0 35.0 40.0 30.0 41.0 30 36.509240157537114 38.0 35.0 40.0 30.0 41.0 31 36.419406494799254 38.0 35.0 41.0 30.0 41.0 32 36.32925858579143 38.0 35.0 41.0 30.0 41.0 33 36.156602527393055 38.0 35.0 41.0 30.0 41.0 34 35.96998728588444 38.0 35.0 40.0 29.0 41.0 35 35.85587574664851 38.0 35.0 40.0 29.0 41.0 36 35.712736884295275 38.0 35.0 40.0 28.0 41.0 37 35.64816586181569 38.0 35.0 40.0 27.0 41.0 38 35.5775677087809 38.0 34.0 40.0 27.0 41.0 39 35.551138405723925 38.0 34.0 40.0 27.0 41.0 40 35.377736561267675 38.0 34.0 40.0 26.0 41.0 41 35.309930872092984 38.0 34.0 40.0 26.0 41.0 42 35.25129853960161 38.0 34.0 40.0 26.0 41.0 43 35.201101931830515 38.0 34.0 40.0 26.0 41.0 44 35.08396710512698 38.0 34.0 40.0 26.0 41.0 45 34.991161588442765 38.0 34.0 40.0 25.0 41.0 46 34.91141767719946 38.0 34.0 40.0 25.0 41.0 47 34.77757699190424 37.0 34.0 40.0 24.0 41.0 48 34.722942674831636 37.0 34.0 40.0 24.0 41.0 49 34.61346140698279 37.0 33.0 40.0 24.0 41.0 50 34.54969450370102 37.0 33.0 40.0 24.0 41.0 51 34.082184494549615 36.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 2.0 11 10.0 12 7.0 13 10.0 14 26.0 15 50.0 16 125.0 17 311.0 18 633.0 19 1252.0 20 2227.0 21 3527.0 22 5253.0 23 7768.0 24 11327.0 25 16203.0 26 22088.0 27 26771.0 28 30082.0 29 34353.0 30 40608.0 31 49258.0 32 61061.0 33 76593.0 34 115701.0 35 153678.0 36 127527.0 37 164084.0 38 242545.0 39 401083.0 40 126.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.691778978868975 23.93640809613803 27.971179665443763 14.400633259549227 2 30.548626317278337 25.574440299794706 30.04068893319977 13.836244449727184 3 29.270754209865075 25.913462473287495 31.398220274717726 13.417563042129698 4 26.24752946607614 27.747945638531483 31.148140458674106 14.856384436718265 5 23.449483187197316 31.885960593141405 29.84869136186556 14.815864857795722 6 21.72131687377022 41.29986307393067 26.521067985706498 10.457752066592612 7 87.52781016765447 3.702209947870245 6.947226071024675 1.8227538134506185 8 88.12450173776305 3.3213509955208926 6.5010089124256485 2.0531383542904025 9 83.22395346897147 5.724237294195351 8.160116315026555 2.891692921806621 10 37.717518320055746 34.7493650782699 14.78832910679418 12.74478749488017 11 30.938705669165795 25.945012547897466 25.89370447427728 17.222577308659464 12 30.728016403529846 22.995362828994203 28.104091411166472 18.172529356309482 13 24.56897768349693 27.16379882969922 28.773166253839484 19.49405723296437 14 19.05442607403542 31.115712250774795 29.874219951062887 19.9556417241269 15 18.442429895169703 28.229288128704233 35.67585842233319 17.652423553792875 16 22.2350248480359 26.422215266849026 33.678920598560744 17.663839286554335 17 22.19506978337079 26.015451382464054 28.442486346595448 23.34699248756971 18 22.622281628636177 27.656557052633428 31.286446451745636 18.434714866984763 19 25.618597859487384 28.70260197166013 27.12026850807036 18.55853166078213 20 26.440781513537992 27.94489839056985 27.552498257846274 18.061821838045876 21 25.294378504300656 27.086460376430647 29.95814440400153 17.661016715267163 22 23.82915038722542 24.330752666859436 30.04288426642313 21.797212679492013 23 21.201587414091907 27.343565258789017 30.356001507880304 21.098845819238772 24 21.109069799678977 26.0385337432125 33.22574109745335 19.62665535965517 25 21.804614088645046 27.853509804671795 30.608841171404716 19.73303493527844 26 21.015172261525656 31.463892099999306 27.268986653001242 20.251948985473796 27 20.03749629145495 30.871716643950194 30.007194420591976 19.083592644002884 28 18.14700076711215 29.485457799109447 32.88333183841595 19.484209595362454 29 20.153974399905664 27.789092455517846 31.796140102402887 20.260793042173606 30 20.642655575425064 27.895158412109204 31.076698043205415 20.385487969260314 31 23.829903072902 27.043494569059224 28.83212663183823 20.29447572620055 32 23.992232283817696 27.8408395957827 28.906077999562186 19.260850120837414 33 23.67967955661796 27.515679383500252 28.15514858956113 20.649492470320663 34 20.776131835405206 28.225650147934093 28.992825023788004 22.005392992872693 35 20.63406241395078 27.731888344097783 29.475171094862855 22.158878147088583 36 23.285585881122078 27.945023838182614 28.076932003003215 20.69245827769209 37 21.057322659414123 29.91009796831319 28.540523655969956 20.492055716302733 38 20.99165083413254 29.882185874473354 27.5845501229073 21.541613168486805 39 21.107250809293912 28.52753982804896 28.00498779708347 22.360221565573664 40 22.312175129885322 27.11732048917042 29.066400048673675 21.504104332270582 41 19.3753837912903 26.65360338859092 29.758808147320657 24.212204672798126 42 21.393145918781453 27.82296331096393 28.37474463570327 22.409146134551346 43 20.9056564955833 27.897604640558093 28.422665623778848 22.77407324007976 44 20.788739320487917 27.507211669638732 29.850008561799573 21.854040448073782 45 20.699608791619596 29.524660178097978 27.63209476814459 22.143636262137843 46 22.317318482008616 28.63454664173604 27.806216054660034 21.241918821595306 47 21.2538990686142 28.42203838571503 28.66653578299068 21.65752676268009 48 21.16044059710555 27.266352253133213 29.784838526969043 21.788368622792202 49 20.920459313889374 27.017652360829985 30.118780072144922 21.94310825313572 50 20.32113334391275 28.61234241427694 29.350852510614434 21.715671731195872 51 19.360455525371467 29.43101353517018 28.302925877396284 22.90560506206207 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1437.0 1 2023.0 2 2609.0 3 9097.0 4 15585.0 5 11147.0 6 6709.0 7 6890.5 8 7072.0 9 7607.5 10 8143.0 11 7966.5 12 7790.0 13 7577.5 14 7365.0 15 6862.0 16 6359.0 17 6682.0 18 7005.0 19 7088.5 20 7172.0 21 7329.0 22 7486.0 23 8426.0 24 9366.0 25 11453.5 26 16268.0 27 18995.0 28 21693.5 29 24392.0 30 29223.0 31 34054.0 32 38753.0 33 43452.0 34 50192.0 35 56932.0 36 60479.5 37 64027.0 38 70423.5 39 76820.0 40 86008.0 41 95196.0 42 105096.0 43 114996.0 44 119010.5 45 123025.0 46 123251.5 47 123478.0 48 123950.0 49 124422.0 50 122200.0 51 119978.0 52 111668.5 53 103359.0 54 94141.0 55 84923.0 56 77770.5 57 70618.0 58 66225.5 59 61833.0 60 56348.0 61 50863.0 62 42640.0 63 34417.0 64 29148.5 65 23880.0 66 19120.0 67 14360.0 68 11896.5 69 9433.0 70 7521.0 71 5609.0 72 4509.5 73 3410.0 74 2726.5 75 1554.0 76 1065.0 77 853.5 78 642.0 79 406.5 80 171.0 81 161.5 82 152.0 83 99.5 84 47.0 85 35.5 86 24.0 87 17.5 88 11.0 89 13.0 90 15.0 91 9.0 92 3.0 93 3.5 94 4.0 95 3.5 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1594291.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.556352917313063 #Duplication Level Percentage of deduplicated Percentage of total 1 81.52826847845478 16.759238595805666 2 6.721615616491143 2.7634380557422946 3 2.095359209855256 1.2921883021898066 4 1.044958185146509 0.8592211695082641 5 0.6663254439649826 0.6848610491964746 6 0.47785933167450273 0.589382704003946 7 0.3642371871910016 0.5241171715855354 8 0.2939575184815281 0.4834155594083095 9 0.24413102051606622 0.4516599074212847 >10 3.6407338445075808 19.100063224121296 >50 1.9219905991802364 28.69001021684168 >100 0.9974962329468687 26.768395426326023 >500 0.0018403989537744702 0.24565507501318834 >1k 9.201994768872351E-4 0.21469597803385684 >5k 3.067331589624117E-4 0.5736575648023582 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9098 0.5706611904602109 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04942635942873666 0.0 2 0.0 0.0 0.0 0.17085964858360236 0.0 3 0.0 0.0 0.0 0.2374723309609099 0.0 4 0.0 0.0 0.0 0.3593446867604471 0.0 5 0.0 0.0 0.0 0.6362702919354121 0.0 6 0.0 0.0 0.0 0.9036618785403668 0.0 7 0.0 0.0 0.0 1.0587151279157945 0.0 8 0.0 0.0 0.0 1.3898968256108828 0.0 9 0.0 0.0 0.0 1.491258496723622 0.0 10 0.0 0.0 0.0 1.7299853038121649 0.0 11 0.0 0.0 0.0 2.021149213035763 0.0 12 0.0 0.0 0.0 2.2807003238430124 0.0 13 0.0 0.0 0.0 2.3798039379260123 0.0 14 0.0 0.0 0.0 2.4197590025911206 0.0 15 0.0 0.0 0.0 2.481541951877041 0.0 16 0.0 0.0 0.0 2.6198479449485697 0.0 17 0.0 0.0 0.0 2.7767829085154467 0.0 18 0.0 0.0 0.0 2.9633235086944603 0.0 19 0.0 0.0 0.0 3.0769163220516202 0.0 20 0.0 0.0 0.0 3.1982241635937227 0.0 21 0.0 0.0 0.0 3.347067756137368 0.0 22 0.0 0.0 0.0 3.5117804716955687 0.0 23 0.0 0.0 0.0 3.6791903109281807 0.0 24 0.0 0.0 0.0 3.81486190413168 0.0 25 0.0 0.0 0.0 3.931590907807922 0.0 26 0.0 0.0 0.0 4.036966902529087 0.0 27 0.0 0.0 0.0 4.153319563367039 0.0 28 0.0 0.0 0.0 4.277638147615461 0.0 29 0.0 0.0 0.0 4.4117416456594185 0.0 30 0.0 0.0 0.0 4.574384475607025 0.0 31 0.0 0.0 0.0 4.720217325444351 0.0 32 0.0 0.0 0.0 4.850557395105411 0.0 33 0.0 0.0 0.0 4.985789921664238 0.0 34 0.0 0.0 0.0 5.125789457508071 0.0 35 0.0 0.0 0.0 5.282348078236658 0.0 36 0.0 0.0 0.0 5.423539366401743 0.0 37 0.0 0.0 0.0 5.5758954921027595 0.0 38 0.0 0.0 0.0 5.7329559032824 0.0 39 0.0 0.0 0.0 5.956189930194676 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGATAC 20 7.034108E-4 45.000004 10 CTACCGA 20 7.034108E-4 45.000004 42 TTCGCGA 20 7.034108E-4 45.000004 2 TACCCGT 25 3.8914877E-5 45.0 41 CGCATCG 90 0.0 45.0 21 TAACGCC 95 0.0 45.0 12 CGGATTA 25 3.8914877E-5 45.0 14 CAATCGA 35 1.21232E-7 45.0 11 CTATGCG 30 2.1660326E-6 44.999996 1 CGTTTTT 4895 0.0 42.83963 1 ATAACGC 95 0.0 42.63158 11 CGTAAGG 315 0.0 42.142857 2 CACGACG 285 0.0 41.05263 26 GCGATAT 110 0.0 40.909092 9 CGACGGT 295 0.0 40.42373 28 TACGGGT 140 0.0 40.17857 4 ACGCACG 45 1.9290383E-8 40.0 1 ACGTGCG 45 1.9290383E-8 40.0 1 GCGTAAG 215 0.0 39.76744 1 TAGGGAC 1740 0.0 39.439655 5 >>END_MODULE