##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547352_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1420812 Sequences flagged as poor quality 0 Sequence length 51 %GC 38 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.462819148486922 31.0 31.0 33.0 30.0 34.0 2 31.865821797676258 31.0 31.0 34.0 30.0 34.0 3 31.764523385219157 31.0 31.0 34.0 30.0 34.0 4 35.63211248215809 37.0 35.0 37.0 33.0 37.0 5 35.58730219057835 37.0 35.0 37.0 33.0 37.0 6 35.65029011579294 37.0 35.0 37.0 33.0 37.0 7 36.055185344718375 37.0 35.0 37.0 35.0 37.0 8 36.07016832628103 37.0 35.0 37.0 35.0 37.0 9 37.816525339031486 39.0 38.0 39.0 35.0 39.0 10 37.24112197813645 39.0 37.0 39.0 34.0 39.0 11 36.91044205707722 39.0 37.0 39.0 32.0 39.0 12 36.71037617925524 39.0 35.0 39.0 32.0 39.0 13 36.60850344732449 39.0 35.0 39.0 32.0 39.0 14 37.79642415745362 40.0 36.0 41.0 33.0 41.0 15 37.91658713468073 40.0 36.0 41.0 33.0 41.0 16 37.97833844308747 40.0 36.0 41.0 33.0 41.0 17 37.89746567455793 40.0 36.0 41.0 33.0 41.0 18 37.65267396390233 39.0 36.0 41.0 33.0 41.0 19 37.45842518221974 39.0 36.0 41.0 33.0 41.0 20 37.15500432147251 39.0 35.0 41.0 32.0 41.0 21 37.04059650397097 38.0 35.0 41.0 32.0 41.0 22 36.974227413619815 38.0 35.0 41.0 32.0 41.0 23 36.919346120387495 38.0 35.0 40.0 32.0 41.0 24 36.7707163227788 38.0 35.0 40.0 32.0 41.0 25 36.69166786316557 38.0 35.0 40.0 32.0 41.0 26 36.55289369740684 38.0 35.0 40.0 31.0 41.0 27 36.45896994113225 38.0 35.0 40.0 31.0 41.0 28 36.42374219812333 38.0 35.0 40.0 31.0 41.0 29 36.38376787358215 38.0 35.0 40.0 31.0 41.0 30 36.2399888232926 38.0 35.0 40.0 31.0 41.0 31 36.02262579426412 38.0 35.0 40.0 30.0 41.0 32 35.70773473197017 38.0 35.0 40.0 29.0 41.0 33 35.27975200096846 38.0 34.0 40.0 26.0 41.0 34 34.8300457766404 38.0 34.0 40.0 23.0 41.0 35 34.48989662249474 38.0 34.0 40.0 21.0 41.0 36 34.26422566813906 38.0 33.0 40.0 21.0 41.0 37 34.14472639589193 38.0 33.0 40.0 20.0 41.0 38 34.044080427248645 37.0 33.0 40.0 18.0 41.0 39 33.99842062144745 37.0 33.0 40.0 18.0 41.0 40 33.8476131958345 37.0 33.0 40.0 18.0 41.0 41 33.74990146479619 37.0 33.0 40.0 18.0 41.0 42 33.66848464117702 37.0 33.0 40.0 18.0 41.0 43 33.61221048245651 37.0 33.0 40.0 18.0 41.0 44 33.477287635521094 37.0 33.0 40.0 17.0 41.0 45 33.37731029861797 36.0 33.0 40.0 17.0 41.0 46 33.300702696767765 36.0 33.0 40.0 17.0 41.0 47 33.190546673310756 36.0 33.0 40.0 15.0 41.0 48 33.121389036691696 36.0 33.0 40.0 15.0 41.0 49 33.01423059489925 36.0 32.0 40.0 15.0 41.0 50 32.93348240302024 36.0 32.0 40.0 15.0 41.0 51 32.5735262652624 35.0 31.0 39.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 4.0 13 5.0 14 12.0 15 46.0 16 104.0 17 258.0 18 652.0 19 1330.0 20 2379.0 21 3881.0 22 6103.0 23 9512.0 24 15238.0 25 23878.0 26 34359.0 27 38154.0 28 35518.0 29 34166.0 30 35693.0 31 41276.0 32 50020.0 33 63371.0 34 95250.0 35 139289.0 36 129168.0 37 144111.0 38 195577.0 39 321367.0 40 91.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.620825274561305 22.620726739357494 26.970492929395302 22.787955056685895 2 37.045224843258644 24.22107921385799 27.340211090559485 11.393484852323882 3 25.35078532557439 23.709892652933675 39.727775384779974 11.211546636711965 4 22.6357885490832 25.65779286774042 39.25445449503523 12.451964088141148 5 20.48659498934412 29.260521448298576 37.70745179517065 12.54543176718665 6 19.07620431133746 37.1348918787285 34.26104227723302 9.527861532701019 7 81.1214291545961 2.7454019250963535 15.083698617410327 1.0494703028972165 8 81.92456144796074 2.3660413904161843 14.639234465925119 1.0701626956979529 9 77.50497602779257 5.4353426069036574 15.483892309468105 1.575789055835677 10 33.238598773095944 38.68851051370625 20.15938773039642 7.913502982801384 11 23.020709284549962 24.47431468765748 37.29536349636687 15.209612531425693 12 24.762459776522157 23.273663229195698 36.545158683907516 15.41871831037463 13 20.02235341480787 27.506031762119125 36.4964541403085 15.975160682764503 14 14.856363825755976 31.077862518053056 36.848084053344145 17.21768960284682 15 14.32624442924187 30.15043510330712 40.89774016548284 14.625580301968169 16 18.36372440548081 27.888137206048373 39.95088723912804 13.79725114934277 17 17.579313800840644 27.994695990743324 35.04847932027601 19.37751088814002 18 17.360917559817906 30.074703760947962 37.04726592962334 15.517112749610787 19 20.536918325577204 29.977787349769002 33.98260994417277 15.502684380481021 20 21.561614062944287 30.256290065117692 33.60620546560699 14.575890406331027 21 20.77769613432319 29.191265276475704 35.66742116479872 14.363617424402383 22 19.325709523849742 26.67298699616839 35.610552275740915 18.390751204240953 23 16.367612323094118 30.8534837825131 35.7125362116874 17.066367682705383 24 16.180888111868423 30.58624223331447 38.41767946779729 14.815190187019816 25 17.157442363943996 31.67343744281439 35.487383270974625 15.681736922266987 26 16.551802771936046 34.71296695129264 32.63021427183892 16.10501600493239 27 15.622404653113852 33.374014296050426 35.404543317483245 15.599037733352478 28 14.13705683792085 32.176389275991475 38.27114354326962 15.415410342818051 29 15.62557185609356 30.598136840060477 37.64551538134531 16.130775922500654 30 16.365148942998793 31.77689940681807 36.02052910589156 15.837422544291574 31 19.46147695824641 31.24431663020864 32.95622503188317 16.33798137966177 32 19.71337516856558 31.649366700168635 33.50907790756272 15.128180223703067 33 19.528340132262397 31.972773315540692 31.9765035768279 16.522382975369016 34 17.587548528587877 32.0142284834306 32.75077913193301 17.647443856048515 35 17.78757499232833 31.855094129272555 33.031745227377016 17.32558565102209 36 20.203939718977598 32.87113284516178 30.95201898632613 15.972908449534492 37 17.621261644749623 34.35943671646917 31.475170536284885 16.54413110249632 38 17.612604623271764 35.35154545428952 30.075759495274536 16.960090427164186 39 17.9750030264384 34.55728132926805 30.017342195871095 17.45037344842245 40 19.78530586734909 32.83727896442316 30.660425165327997 16.716990002899752 41 17.05749951436221 32.632114593626746 31.809204877211062 18.50118101479999 42 18.026311714709617 33.69650594167279 29.313589693780738 18.963592649836855 43 18.388780500164696 33.59853379616726 29.335548967773356 18.67713673589469 44 18.221833711990048 34.518711835204094 29.72743754979547 17.53201690301039 45 17.461916143726263 35.62300994079442 28.496310560440087 18.418763355039232 46 18.81037040790759 35.17727890811733 29.0740083839382 16.93834230003688 47 18.832822357919273 33.31334476341697 30.088639454058665 17.765193424605087 48 18.459092406314138 33.160333668353026 31.245935422842713 17.134638502490127 49 18.19304735601895 32.85248153872574 30.809987528258485 18.144483576996816 50 17.227331976362812 34.423484598947645 30.706595946543246 17.6425874781463 51 16.682643446142066 34.679324217419335 30.066257886335418 18.57177445010318 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2138.0 1 2344.0 2 2550.0 3 32428.0 4 62306.0 5 40074.5 6 17843.0 7 18166.5 8 18490.0 9 21035.5 10 23581.0 11 26101.5 12 28622.0 13 29228.5 14 29835.0 15 29222.0 16 28609.0 17 26463.5 18 24318.0 19 22476.0 20 20634.0 21 19314.0 22 17994.0 23 18217.5 24 18441.0 25 19191.5 26 21618.0 27 23294.0 28 26083.5 29 28873.0 30 33058.0 31 37243.0 32 43046.0 33 48849.0 34 50837.5 35 52826.0 36 56144.5 37 59463.0 38 63465.0 39 67467.0 40 75926.0 41 84385.0 42 86868.5 43 89352.0 44 92100.5 45 94849.0 46 93481.0 47 92113.0 48 93314.0 49 94515.0 50 88616.0 51 82717.0 52 75567.5 53 68418.0 54 60246.5 55 52075.0 56 45271.0 57 38467.0 58 35282.0 59 32097.0 60 27634.0 61 23171.0 62 19223.0 63 15275.0 64 12090.0 65 8905.0 66 6961.0 67 5017.0 68 3709.0 69 2401.0 70 1992.0 71 1583.0 72 1341.5 73 1100.0 74 789.5 75 349.0 76 219.0 77 184.0 78 149.0 79 113.0 80 77.0 81 85.5 82 94.0 83 57.5 84 21.0 85 14.5 86 8.0 87 5.5 88 3.0 89 2.5 90 2.0 91 1.5 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1420812.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.850442138502572 #Duplication Level Percentage of deduplicated Percentage of total 1 77.1718719808009 20.720988833404228 2 6.972751211421832 3.744429058969113 3 3.3781285355548976 2.7211273434102363 4 2.158194716190739 2.3179392940280574 5 1.5715045452741314 2.109779593163843 6 1.0796190491222566 1.739294928604939 7 0.7898134833293543 1.4844788864040797 8 0.5812271808574057 1.2484965431149393 9 0.4483434984546087 1.083439904708636 >10 4.415467700155101 26.856473612018632 >50 1.1431010797951398 21.558489988302643 >100 0.28603354191008196 10.189650935772518 >500 0.0028918832312527054 0.5415619003185622 >1k 7.886954267052833E-4 0.3085462807993268 >5k 0.0 0.0 >10k+ 2.6289847556842775E-4 3.375302896980236 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 47816 3.365399503945631 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1722 0.12119830069002796 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.03237585268142443 0.0 2 0.0 0.0 0.0 0.11423045413467792 0.0 3 0.0 0.0 0.0 0.20987998412175574 0.0 4 0.0 0.0 0.0 0.3059518078394608 0.0 5 0.0 0.0 0.0 0.5260372237847091 0.0 6 0.0 0.0 0.0 0.8609161521721382 0.0 7 0.0 0.0 0.0 1.0582680889519513 0.0 8 0.0 0.0 0.0 1.3546479055638607 0.0 9 0.0 0.0 0.0 1.532152037004192 0.0 10 0.0 0.0 0.0 1.7520263060841266 0.0 11 0.0 0.0 0.0 2.039045278333798 0.0 12 0.0 0.0 0.0 2.2517405539930686 0.0 13 7.038228843787919E-5 0.0 0.0 2.3694901225496405 0.0 14 7.038228843787919E-5 0.0 0.0 2.433538005028111 0.0 15 7.038228843787919E-5 0.0 0.0 2.500401179044096 0.0 16 7.038228843787919E-5 0.0 0.0 2.5890828624758235 0.0 17 7.038228843787919E-5 0.0 0.0 2.7050024915330106 0.0 18 7.038228843787919E-5 0.0 0.0 2.8436555997556328 0.0 19 7.038228843787919E-5 0.0 0.0 2.9339560758214316 0.0 20 7.038228843787919E-5 0.0 0.0 3.0259457268097396 0.0 21 7.038228843787919E-5 0.0 0.0 3.1315191594665586 0.0 22 7.038228843787919E-5 0.0 0.0 3.241948970025591 0.0 23 7.038228843787919E-5 0.0 0.0 3.362513830119678 0.0 24 7.038228843787919E-5 0.0 0.0 3.459148712144886 0.0 25 7.038228843787919E-5 0.0 0.0 3.5400883438484474 0.0 26 7.038228843787919E-5 0.0 0.0 3.618071919437617 0.0 27 7.038228843787919E-5 0.0 0.0 3.7005599614868117 0.0 28 7.038228843787919E-5 0.0 0.0 3.7882562928804093 0.0 29 7.038228843787919E-5 0.0 0.0 3.8834835291368597 0.0 30 7.038228843787919E-5 0.0 0.0 4.006159857884083 0.0 31 1.4076457687575838E-4 0.0 0.0 4.106736148061812 0.0 32 1.4076457687575838E-4 0.0 0.0 4.207453202816418 0.0 33 1.4076457687575838E-4 0.0 0.0 4.304158467130064 0.0 34 1.4076457687575838E-4 0.0 0.0 4.401074878309023 0.0 35 1.4076457687575838E-4 0.0 0.0 4.519598652038412 0.0 36 1.4076457687575838E-4 0.0 0.0 4.630380374039634 0.0 37 1.4076457687575838E-4 0.0 0.0 4.740528655444915 0.0 38 1.4076457687575838E-4 0.0 0.0 4.863486513345889 0.0 39 1.4076457687575838E-4 0.0 0.0 5.008685174393234 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCGAG 35 1.2121927E-7 45.000004 1 CGTGGTA 20 7.03385E-4 45.0 41 ATATCGA 25 3.8912724E-5 45.0 41 CGTAGCA 25 3.8912724E-5 45.0 28 TACGACT 20 7.03385E-4 45.0 32 CATGTCG 25 3.8912724E-5 45.0 1 CAGTCGT 25 3.8912724E-5 45.0 29 CCGAACG 20 7.03385E-4 45.0 42 CGGTCCG 20 7.03385E-4 45.0 29 TATCGTG 20 7.03385E-4 45.0 1 AATCGCG 20 7.03385E-4 45.0 1 ACCGCGT 30 2.1658652E-6 44.999996 23 TATTACG 30 2.1658652E-6 44.999996 1 CGTTTTT 18450 0.0 44.23171 1 CGACGGT 280 0.0 44.19643 28 TCACGAC 290 0.0 42.672413 25 ACGGGCC 85 0.0 42.352943 5 CACGACG 295 0.0 41.949154 26 TACGGGA 590 0.0 41.949154 4 CGGTCTA 295 0.0 41.949154 31 >>END_MODULE