SRR1547351_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547351_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	891302
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10041	1.1265541870207851	No Hit
AGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	1162	0.13037107512380763	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	1107	0.1242003271618374	No Hit
GAGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	1040	0.11668323418998275	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGGGTTA	55	1.8189894E-12	45.000004	6
TCGTTAG	35	1.2115197E-7	45.000004	1
ACCGCTC	35	1.2115197E-7	45.000004	18
ATAGCGG	130	0.0	45.000004	2
AACGACC	45	3.8380676E-10	45.000004	36
ACGCTAC	45	3.8380676E-10	45.000004	16
CGTAAGG	110	0.0	45.000004	2
ATACGTA	45	3.8380676E-10	45.000004	10
TGTGTCG	35	1.2115197E-7	45.000004	1
ATACCCG	45	3.8380676E-10	45.000004	1
GCGTAAG	70	0.0	45.000004	1
CGCCCAT	45	3.8380676E-10	45.000004	13
ATTCTCG	35	1.2115197E-7	45.000004	18
CTATGCG	20	7.032434E-4	45.0	1
AGCCGGT	25	3.8900987E-5	45.0	19
GTACCGG	20	7.032434E-4	45.0	14
ACACGGC	20	7.032434E-4	45.0	12
CTCGTTA	20	7.032434E-4	45.0	45
CCCTCGC	20	7.032434E-4	45.0	44
TCCGCGA	20	7.032434E-4	45.0	31