##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547351_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 891302 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.328260230539144 31.0 31.0 33.0 30.0 34.0 2 31.744940547648273 31.0 31.0 34.0 30.0 34.0 3 31.824832660534813 31.0 31.0 34.0 30.0 34.0 4 35.60429349423652 37.0 35.0 37.0 33.0 37.0 5 35.486783379819634 37.0 35.0 37.0 33.0 37.0 6 35.52830017210777 37.0 35.0 37.0 33.0 37.0 7 35.929920498327164 37.0 35.0 37.0 35.0 37.0 8 35.918528175635196 37.0 35.0 37.0 35.0 37.0 9 37.65289542713917 39.0 37.0 39.0 35.0 39.0 10 36.987255722527266 39.0 37.0 39.0 32.0 39.0 11 36.752263542547865 39.0 35.0 39.0 32.0 39.0 12 36.14074354147079 38.0 35.0 39.0 32.0 39.0 13 35.778000049365986 38.0 35.0 39.0 31.0 39.0 14 36.843626514918626 39.0 35.0 41.0 31.0 41.0 15 37.10028475196959 39.0 35.0 41.0 32.0 41.0 16 37.221392973425395 39.0 35.0 41.0 32.0 41.0 17 37.155865239840146 39.0 35.0 41.0 32.0 41.0 18 37.03936039636397 38.0 35.0 41.0 32.0 41.0 19 36.94142950425333 38.0 35.0 41.0 32.0 41.0 20 36.74856670354156 38.0 35.0 40.0 31.0 41.0 21 36.60394681039648 38.0 35.0 40.0 31.0 41.0 22 36.482224880007 38.0 35.0 40.0 31.0 41.0 23 36.43585114809571 38.0 35.0 40.0 31.0 41.0 24 36.297844052857506 38.0 35.0 40.0 31.0 41.0 25 36.27541731085535 38.0 35.0 40.0 31.0 41.0 26 36.14370550049254 38.0 35.0 40.0 30.0 41.0 27 36.0757543458895 38.0 35.0 40.0 30.0 41.0 28 36.14013207644547 38.0 35.0 40.0 30.0 41.0 29 36.214911444156975 38.0 35.0 40.0 30.0 41.0 30 36.15873968643625 38.0 35.0 40.0 30.0 41.0 31 35.98792889503221 38.0 35.0 40.0 30.0 41.0 32 35.8135895577481 38.0 35.0 40.0 30.0 41.0 33 35.55565117098357 38.0 34.0 40.0 29.0 41.0 34 35.340552360479386 38.0 34.0 40.0 27.0 41.0 35 35.17081527922073 38.0 34.0 40.0 26.0 41.0 36 34.99986873136154 38.0 34.0 40.0 25.0 41.0 37 34.898261195419735 38.0 34.0 40.0 25.0 41.0 38 34.86821862847834 37.0 34.0 40.0 25.0 41.0 39 34.87586138031778 37.0 34.0 40.0 25.0 41.0 40 34.73782062645434 37.0 34.0 40.0 24.0 41.0 41 34.68704210245237 37.0 34.0 40.0 24.0 41.0 42 34.592693610022195 37.0 34.0 40.0 23.0 41.0 43 34.51436213539294 37.0 33.0 40.0 23.0 41.0 44 34.377249237632135 37.0 33.0 40.0 23.0 41.0 45 34.27838039183128 37.0 33.0 40.0 23.0 41.0 46 34.19202357898894 36.0 33.0 40.0 23.0 41.0 47 34.0482911515962 36.0 33.0 40.0 23.0 41.0 48 34.03676307244907 36.0 33.0 40.0 23.0 41.0 49 33.968455136418406 36.0 33.0 40.0 23.0 41.0 50 33.885926431220845 36.0 33.0 40.0 23.0 41.0 51 33.445163367747405 35.0 32.0 39.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 3.0 12 2.0 13 4.0 14 7.0 15 30.0 16 82.0 17 217.0 18 473.0 19 846.0 20 1447.0 21 2301.0 22 3649.0 23 5254.0 24 7691.0 25 11361.0 26 15499.0 27 18410.0 28 19826.0 29 21679.0 30 24497.0 31 28801.0 32 35695.0 33 45101.0 34 73762.0 35 108862.0 36 63166.0 37 78912.0 38 119692.0 39 203964.0 40 69.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.725163861407246 24.225346739937752 28.876519967418453 16.17296943123655 2 31.088564818658547 25.933858557481077 30.932276602094465 12.045300021765911 3 27.691960749555143 24.899192417384906 33.81547444076194 13.593372392298008 4 24.832099557725666 27.130422685015855 33.91061615479377 14.126861602464707 5 21.799120836708546 31.81301062939385 33.329443892193666 13.058424641703933 6 20.871376929480693 41.39124561596406 28.353240540243373 9.384136914311872 7 87.59129902098279 3.2709452015141895 7.983152736109646 1.1546030413933772 8 88.590511409152 2.5218163989310023 7.482200197015152 1.4054719949018402 9 84.31530502568152 5.638605096813426 8.48163697601935 1.5644529014856918 10 37.36141061054502 38.29835454200708 14.301549867497213 10.038684979950679 11 35.0354874105522 22.432576163859164 26.02047341978364 16.51146300580499 12 34.56090079456794 21.417207635571334 26.76702172776455 17.25486984209617 13 21.921974818860498 32.743783812893945 27.170139862807442 18.16410150543811 14 15.697373056494882 36.50524737967603 29.76948329522429 18.027896268604803 15 14.819556110050241 28.146127799556155 40.85483932494261 16.179476765450993 16 18.124384327646524 24.094302492309005 40.9808347787843 16.80047840126018 17 18.193160118568116 24.51896214751005 29.91679587838914 27.37108185553269 18 21.296373170934206 26.80393402011888 32.41987564259926 19.479817166347658 19 24.740211510801053 28.398230902657012 27.91253694034121 18.949020646200726 20 26.614996937065104 26.66122144907113 29.387345703252098 17.336435910611666 21 24.124258668778932 27.43795032435695 30.60242207467278 17.835368932191333 22 23.37322254409841 24.015541309230766 30.509748659825735 22.101487486845087 23 19.62982243953228 28.209181624185742 30.283450502747666 21.877545433534312 24 18.84052767748754 26.739870436731884 36.68835030102031 17.731251584760273 25 17.826729885044575 28.199981599951528 34.34032460378189 19.63296391122201 26 16.83121994565254 35.02314591462826 27.77274145014821 20.37289268957099 27 17.67807095686984 33.493024810894624 30.906359460654187 17.92254477158135 28 14.228622846128472 31.091481899513298 36.99228768700171 17.68760756735652 29 16.39208708159524 26.234991058025226 37.659289443981955 19.713632416397584 30 18.591566046076412 29.449726355376743 34.24641703934245 17.712290559204398 31 25.512340373969767 28.269654954213053 27.618136164846486 18.5998685069707 32 25.35493020323078 27.883253936376224 29.408214050905308 17.353601809487692 33 23.99321442115018 28.176083976026085 27.63317035079019 20.197531252033542 34 20.08410168495078 28.292542819381083 29.48899475149837 22.134360744169765 35 19.888769463100047 27.096988450603725 31.207267570363356 21.806974515932872 36 25.755916625341353 26.59255785356703 29.171032938330665 18.48049258276095 37 19.348099746213965 30.670188106836964 31.160930862939836 18.820781284009236 38 18.928376689382496 32.89995983404054 27.750302366650136 20.421361109926824 39 18.995132962789267 30.85407639610368 29.661551303598554 20.4892393375085 40 22.076019127074773 27.51009197780326 28.703514633648304 21.710374261473664 41 17.787237098087967 25.508525729775094 31.011823153095136 25.692414019041802 42 20.443014825502466 27.237793699554135 26.788451052505213 25.530740422438186 43 20.478468577429425 27.73145353651175 27.701385164624337 24.088692721434484 44 19.190689575474977 30.387680045596216 29.18988176846905 21.231748610459753 45 19.281006886554724 32.86282315085123 26.348757211360457 21.50741275123359 46 22.88550906426778 31.951347579159478 27.245422987943478 17.917720368629265 47 20.896396507581045 28.905578580548458 28.27313301215525 21.92489189971525 48 21.360436754321206 27.772180473060757 30.831300726353135 20.0360820462649 49 19.955750127341798 26.741104586324276 31.377916800366208 21.92522848596772 50 18.552073259119805 29.84252251201052 32.14017246679577 19.46523176207391 51 18.03204749905195 30.5498024238698 28.846339400113543 22.57181067696471 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1218.0 1 1413.0 2 1608.0 3 8328.0 4 15048.0 5 10224.5 6 5401.0 7 5510.5 8 5620.0 9 5863.0 10 6106.0 11 6171.5 12 6237.0 13 5931.5 14 5626.0 15 5427.0 16 5228.0 17 4685.0 18 4142.0 19 4441.0 20 4740.0 21 5157.0 22 5574.0 23 5650.5 24 5727.0 25 5907.0 26 8277.0 27 10467.0 28 12024.0 29 13581.0 30 15817.5 31 18054.0 32 20979.5 33 23905.0 34 27263.0 35 30621.0 36 31937.5 37 33254.0 38 36870.0 39 40486.0 40 49609.5 41 58733.0 42 69691.0 43 80649.0 44 80109.0 45 79569.0 46 81459.0 47 83349.0 48 78108.5 49 72868.0 50 68346.5 51 63825.0 52 59229.0 53 54633.0 54 47692.0 55 40751.0 56 36392.0 57 32033.0 58 28204.5 59 24376.0 60 21614.0 61 18852.0 62 15879.5 63 12907.0 64 10638.5 65 8370.0 66 6776.0 67 5182.0 68 3841.5 69 2501.0 70 1906.5 71 1312.0 72 1353.0 73 1394.0 74 917.5 75 325.5 76 210.0 77 217.5 78 225.0 79 194.5 80 164.0 81 108.5 82 53.0 83 60.5 84 68.0 85 48.0 86 28.0 87 25.5 88 23.0 89 25.0 90 27.0 91 22.0 92 17.0 93 14.5 94 12.0 95 6.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 891302.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.39042700973737 #Duplication Level Percentage of deduplicated Percentage of total 1 83.30876660590907 16.98701324749035 2 7.006050737092832 2.8571273236241614 3 2.0110467553306752 1.2301830623321788 4 0.966697919672568 0.7884553348619381 5 0.6035625546602952 0.6153449108305684 6 0.3989864737581334 0.48813027426226263 7 0.28951106704717994 0.4132277996795693 8 0.23824336104679786 0.3886307091183391 9 0.20999964783685265 0.3853784242159106 >10 2.429304338125342 11.941735257286954 >50 1.1497903555221511 17.198164716058074 >100 1.3825123457504327 44.748975127455026 >500 0.00331670294862159 0.452888798927267 >1k 0.001658351474310795 0.3729738764684736 >5k 0.0 0.0 >10k+ 5.527838247702649E-4 1.1317711373889219 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10041 1.1265541870207851 No Hit AGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT 1162 0.13037107512380763 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1107 0.1242003271618374 No Hit GAGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT 1040 0.11668323418998275 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.03747326944178292 0.0 2 0.0 0.0 0.0 0.12184422339453968 0.0 3 0.0 0.0 0.0 0.1712102070903016 0.0 4 0.0 0.0 0.0 0.3186349856726452 0.0 5 0.0 0.0 0.0 0.541118498556045 0.0 6 0.0 0.0 0.0 0.778299611130683 0.0 7 0.0 0.0 0.0 0.908782881671981 0.0 8 0.0 0.0 0.0 1.1848958041157767 0.0 9 0.0 0.0 0.0 1.2605155155042846 0.0 10 0.0 0.0 0.0 1.4352037805367877 0.0 11 0.0 0.0 0.0 1.6757507556361368 0.0 12 0.0 0.0 0.0 1.8920635205575664 0.0 13 0.0 0.0 0.0 1.9639807831688922 0.0 14 0.0 0.0 0.0 1.989785729191677 0.0 15 0.0 0.0 0.0 2.0338785282653915 0.0 16 0.0 0.0 0.0 2.1503373716203935 0.0 17 0.0 0.0 0.0 2.282166987171576 0.0 18 0.0 0.0 0.0 2.4439527791926867 0.0 19 0.0 0.0 0.0 2.5347188719423945 0.0 20 0.0 0.0 0.0 2.640406955218321 0.0 21 0.0 0.0 0.0 2.787382952130703 0.0 22 0.0 0.0 0.0 2.9435589732772955 0.0 23 0.0 0.0 0.0 3.103774029453541 0.0 24 0.0 0.0 0.0 3.22236458574086 0.0 25 0.0 0.0 0.0 3.316608736432769 0.0 26 0.0 0.0 0.0 3.4128724046395047 0.0 27 0.0 0.0 0.0 3.5066677736614524 0.0 28 0.0 0.0 0.0 3.616843673636994 0.0 29 0.0 0.0 0.0 3.730609826972227 0.0 30 0.0 0.0 0.0 3.8725370300975426 0.0 31 0.0 0.0 0.0 4.005264208988648 0.0 32 0.0 0.0 0.0 4.124079156110948 0.0 33 0.0 0.0 0.0 4.243118494068228 0.0 34 0.0 0.0 0.0 4.3720310287646615 0.0 35 0.0 0.0 0.0 4.529889981173609 0.0 36 0.0 0.0 0.0 4.674061092648732 0.0 37 0.0 0.0 0.0 4.801066305247828 0.0 38 1.1219541749036802E-4 0.0 0.0 4.939178864178471 0.0 39 1.1219541749036802E-4 0.0 0.0 5.090867068625449 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGTTA 55 1.8189894E-12 45.000004 6 TCGTTAG 35 1.2115197E-7 45.000004 1 ACCGCTC 35 1.2115197E-7 45.000004 18 ATAGCGG 130 0.0 45.000004 2 AACGACC 45 3.8380676E-10 45.000004 36 ACGCTAC 45 3.8380676E-10 45.000004 16 CGTAAGG 110 0.0 45.000004 2 ATACGTA 45 3.8380676E-10 45.000004 10 TGTGTCG 35 1.2115197E-7 45.000004 1 ATACCCG 45 3.8380676E-10 45.000004 1 GCGTAAG 70 0.0 45.000004 1 CGCCCAT 45 3.8380676E-10 45.000004 13 ATTCTCG 35 1.2115197E-7 45.000004 18 CTATGCG 20 7.032434E-4 45.0 1 AGCCGGT 25 3.8900987E-5 45.0 19 GTACCGG 20 7.032434E-4 45.0 14 ACACGGC 20 7.032434E-4 45.0 12 CTCGTTA 20 7.032434E-4 45.0 45 CCCTCGC 20 7.032434E-4 45.0 44 TCCGCGA 20 7.032434E-4 45.0 31 >>END_MODULE