##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547350_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2063772 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.32244695634983 31.0 31.0 33.0 30.0 34.0 2 31.736429702505898 31.0 31.0 34.0 30.0 34.0 3 31.797097256867524 31.0 31.0 34.0 30.0 34.0 4 35.60421693869284 37.0 35.0 37.0 33.0 37.0 5 35.4976659243366 37.0 35.0 37.0 33.0 37.0 6 35.53652632170608 37.0 35.0 37.0 33.0 37.0 7 35.93534896296684 37.0 35.0 37.0 35.0 37.0 8 35.92413406132073 37.0 35.0 37.0 35.0 37.0 9 37.63539916231056 39.0 37.0 39.0 35.0 39.0 10 36.99881672975503 39.0 37.0 39.0 33.0 39.0 11 36.732185532122735 39.0 37.0 39.0 32.0 39.0 12 36.5144875499813 39.0 35.0 39.0 32.0 39.0 13 36.425280021242656 39.0 35.0 39.0 32.0 39.0 14 37.52152466454628 40.0 36.0 41.0 32.0 41.0 15 37.638709605518436 40.0 36.0 41.0 32.0 41.0 16 37.66955312893091 40.0 36.0 41.0 32.0 41.0 17 37.5743396072822 40.0 36.0 41.0 32.0 41.0 18 37.41228779148084 39.0 36.0 41.0 32.0 41.0 19 37.35135276571249 39.0 36.0 41.0 32.0 41.0 20 37.16656055029335 39.0 35.0 41.0 32.0 41.0 21 37.05889022624592 39.0 35.0 41.0 31.0 41.0 22 36.994842938076495 39.0 35.0 41.0 31.0 41.0 23 36.91638901971729 39.0 35.0 41.0 31.0 41.0 24 36.77739546810403 38.0 35.0 40.0 31.0 41.0 25 36.70558230269623 38.0 35.0 40.0 31.0 41.0 26 36.58458686327753 38.0 35.0 40.0 31.0 41.0 27 36.500550448402244 38.0 35.0 40.0 30.0 41.0 28 36.5473312943484 38.0 35.0 40.0 30.0 41.0 29 36.53899171032459 38.0 35.0 40.0 30.0 41.0 30 36.46222305564762 38.0 35.0 40.0 30.0 41.0 31 36.350944774907305 38.0 35.0 41.0 30.0 41.0 32 36.217749344404325 38.0 35.0 41.0 30.0 41.0 33 35.99084201161756 38.0 35.0 41.0 29.0 41.0 34 35.71554997354359 38.0 35.0 40.0 27.0 41.0 35 35.52572134906375 38.0 35.0 40.0 26.0 41.0 36 35.382010222059414 38.0 34.0 40.0 25.0 41.0 37 35.31241241765079 38.0 34.0 40.0 25.0 41.0 38 35.225286029658314 38.0 34.0 40.0 25.0 41.0 39 35.18760841798416 38.0 34.0 40.0 24.0 41.0 40 35.04783910238147 38.0 34.0 40.0 24.0 41.0 41 34.96327598203678 38.0 34.0 40.0 24.0 41.0 42 34.89923353936384 38.0 34.0 40.0 24.0 41.0 43 34.85931730830731 38.0 34.0 40.0 23.0 41.0 44 34.73329127442373 38.0 34.0 40.0 23.0 41.0 45 34.65093963868102 38.0 34.0 40.0 23.0 41.0 46 34.587437953417336 38.0 33.0 40.0 23.0 41.0 47 34.461448260757486 38.0 33.0 40.0 23.0 41.0 48 34.398625914102915 37.0 33.0 40.0 23.0 41.0 49 34.29117266829863 37.0 33.0 40.0 23.0 41.0 50 34.23138166425361 37.0 33.0 40.0 23.0 41.0 51 33.79151815219898 37.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 3.0 11 6.0 12 3.0 13 13.0 14 28.0 15 57.0 16 183.0 17 455.0 18 952.0 19 1860.0 20 3236.0 21 5045.0 22 7690.0 23 11415.0 24 16534.0 25 24498.0 26 34436.0 27 41036.0 28 44013.0 29 46851.0 30 53369.0 31 62811.0 32 75978.0 33 95494.0 34 138518.0 35 175265.0 36 169594.0 37 211098.0 38 316006.0 39 527209.0 40 115.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.728650257877323 23.545769590826893 27.202035883808872 17.523544267486912 2 33.4613998057925 24.086720819935536 29.682687816289782 12.769191557982179 3 27.645350358469834 24.64627875559897 34.571987603281755 13.136383282649438 4 24.97102393093811 27.15808723056617 33.75212959571115 14.11875924278457 5 22.17459099164055 31.145446299300506 32.571427463886515 14.108535245172432 6 20.91955894352671 40.04226242046118 29.41948044648343 9.618698189528688 7 86.36700178120451 3.0972413619333916 9.098582595364217 1.4371742614978786 8 87.06165215925014 2.547907423882095 8.867791597133792 1.522648819733963 9 82.04854993671782 5.801367592931777 9.950372424860886 2.199710045489521 10 34.156631643417974 42.0346821257387 14.878533093771987 8.930153137071343 11 25.880668988628592 24.530277569421425 31.72036445886464 17.86868898308534 12 26.359452497659625 22.603029792050673 33.29103214890017 17.746485561389534 13 24.67840439738498 23.71032265192085 32.647017209265364 18.9642557414288 14 18.432656320562543 29.071961437600663 32.793060473734506 19.70232176810229 15 18.161260061673477 29.007225604378778 35.809333589175544 17.022180744772193 16 23.226257551706293 27.275590520658287 33.84080218163634 15.657349745999074 17 22.46536923652419 27.516847791325787 30.820894943821315 19.19688802832871 18 21.302886171534453 28.469763132749158 31.791302527604792 18.436048168111594 19 23.29612961121674 28.807494238704663 30.245298414747367 17.651077735331228 20 24.544620239057416 28.74581106827692 30.212639768346506 16.49692892431916 21 25.426791331600583 25.77682999866264 32.55369294670148 16.242685723035297 22 23.479580108655412 23.8230773554443 32.91773509864462 19.779607437255667 23 20.593214754343016 26.67809234741047 33.52317988615021 19.205513012096297 24 20.377396340293405 27.58371564300708 33.790845112735326 18.248042903964198 25 21.770282763793674 28.76751889259085 30.588504931746336 18.87369341186914 26 20.55779417493793 31.009094027828652 29.057521858034708 19.375589939198708 27 19.202363439372178 29.975161984947952 32.546085517198605 18.276389058481264 28 18.651333577546357 29.4678385015399 33.219221890790266 18.661606030123483 29 19.766718416569272 28.299153201031896 32.925148708287544 19.008979674111288 30 20.862624359667635 27.534291578720904 32.60815632734624 18.994927734265218 31 21.980577311834836 27.793186456643465 30.497361142606838 19.72887508891486 32 21.852704659235613 29.000587274175636 30.546009927453227 18.600698139135524 33 21.926550025874953 27.896153257239657 30.426471528831673 19.75082518805372 34 20.942042047280417 28.32042493066094 31.14428338014083 19.593249641917808 35 20.50657727694726 28.467098109674904 30.76371808513731 20.262606528240525 36 21.983533064699007 28.878093122689908 29.683172365939647 19.455201446671435 37 20.786695429533882 30.183227604599733 29.711663885351676 19.318413080514706 38 20.53724926978368 30.542472715009218 29.0439544678385 19.876323547368603 39 20.24550192560031 28.826391675049372 29.71830221555482 21.209804183795498 40 21.7616093250611 28.495153534402057 30.053416753401052 19.68982038713579 41 19.29835272501032 28.818348150861627 30.523429913769544 21.35986921035851 42 20.076394097797625 30.290458442114733 28.862248349139342 20.770899110948303 43 20.953768148807136 28.805701405000168 28.97083592567396 21.26969452051874 44 20.43617221282196 29.632730747388763 29.53223515000688 20.3988618897824 45 20.782431392615074 29.13025276047935 28.94021238780253 21.14710345910304 46 20.9628292272596 30.128037399480174 28.207524862242533 20.701608511017692 47 20.57833908009218 29.51483981757675 29.749119573286197 20.157701529044875 48 20.491265508011544 28.79445985312331 29.973611426068388 20.74066321279676 49 20.167344067077178 28.185671673033646 30.53951696214504 21.10746729774413 50 19.09949354870596 29.365501615488533 30.519311241745694 21.015693594059808 51 19.36807941962581 29.05582593426018 30.245637599502274 21.33045704661174 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2353.0 1 3035.0 2 3717.0 3 24069.0 4 44421.0 5 29718.0 6 15015.0 7 14648.0 8 14281.0 9 15028.5 10 15776.0 11 15692.0 12 15608.0 13 15444.0 14 15280.0 15 14489.0 16 13698.0 17 13115.0 18 12532.0 19 12713.0 20 12894.0 21 13578.5 22 14263.0 23 15216.0 24 16169.0 25 18901.5 26 24914.5 27 28195.0 28 33237.0 29 38279.0 30 44966.5 31 51654.0 32 57590.5 33 63527.0 34 70817.0 35 78107.0 36 83554.0 37 89001.0 38 98872.5 39 108744.0 40 114619.0 41 120494.0 42 128156.0 43 135818.0 44 139776.0 45 143734.0 46 146987.0 47 150240.0 48 151361.0 49 152482.0 50 144310.0 51 136138.0 52 126609.0 53 117080.0 54 107793.5 55 98507.0 56 93613.0 57 88719.0 58 83113.0 59 77507.0 60 69251.5 61 60996.0 62 52306.0 63 43616.0 64 35308.0 65 27000.0 66 21025.0 67 15050.0 68 12030.0 69 9010.0 70 7295.5 71 5581.0 72 4421.0 73 3261.0 74 2519.0 75 1294.5 76 812.0 77 587.5 78 363.0 79 284.5 80 206.0 81 164.0 82 122.0 83 81.0 84 40.0 85 30.5 86 21.0 87 21.0 88 21.0 89 22.0 90 23.0 91 12.5 92 2.0 93 2.5 94 3.0 95 1.5 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2063772.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.238881237752647 #Duplication Level Percentage of deduplicated Percentage of total 1 79.70405104441215 17.72528925344457 2 6.436019715464755 2.8625975619211057 3 2.36376253876163 1.577023031213057 4 1.403500981300726 1.2484916656086458 5 0.9253480799804105 1.0289353027133392 6 0.6651929138034887 0.887588772616225 7 0.5347092312801641 0.8323934563818707 8 0.413850060261999 0.7362849872322699 9 0.36143129356295395 0.7234044851838461 >10 4.850197425810174 26.416138225718367 >50 1.803979142314353 28.382148988891164 >100 0.5344386360216431 15.352601535567507 >500 0.0021993356409701907 0.31919164665686117 >1k 0.0010996678204850954 0.4581960382901433 >5k 0.0 0.0 >10k+ 2.1993356409701905E-4 1.4497150485610426 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 29640 1.4362051621981498 No Hit AGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT 3065 0.14851446768344567 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.025826496337773747 0.0 2 0.0 0.0 0.0 0.07161643824996172 0.0 3 0.0 0.0 0.0 0.11343307303326143 0.0 4 0.0 0.0 0.0 0.18616397547791133 0.0 5 0.0 0.0 0.0 0.3611833090089409 0.0 6 0.0 0.0 0.0 0.6606834475901407 0.0 7 0.0 0.0 0.0 0.8456845039083775 0.0 8 0.0 0.0 0.0 1.13234407676817 0.0 9 0.0 0.0 0.0 1.2822637384362225 0.0 10 0.0 0.0 0.0 1.4714803767082798 0.0 11 0.0 0.0 0.0 1.6586619064509065 0.0 12 0.0 0.0 0.0 1.817255006851532 0.0 13 0.0 0.0 0.0 1.9015666459279417 0.0 14 0.0 0.0 0.0 1.9553516570628926 0.0 15 4.84549649864423E-5 0.0 0.0 2.0020137883448363 0.0 16 4.84549649864423E-5 0.0 0.0 2.0728064921900287 0.0 17 4.84549649864423E-5 0.0 0.0 2.16036461392053 0.0 18 4.84549649864423E-5 0.0 0.0 2.266529442205825 0.0 19 4.84549649864423E-5 0.0 0.0 2.342894467024458 0.0 20 4.84549649864423E-5 0.0 0.0 2.4240080784117626 0.0 21 4.84549649864423E-5 0.0 0.0 2.5230500268440506 0.0 22 4.84549649864423E-5 0.0 0.0 2.6423461506406714 0.0 23 4.84549649864423E-5 0.0 0.0 2.771575542259513 0.0 24 4.84549649864423E-5 0.0 0.0 2.874542342855703 0.0 25 4.84549649864423E-5 0.0 0.0 2.9652984922753096 0.0 26 4.84549649864423E-5 0.0 0.0 3.0549886324652142 0.0 27 4.84549649864423E-5 0.0 0.0 3.144678772655119 0.0 28 4.84549649864423E-5 0.0 0.0 3.2414917926980307 0.0 29 4.84549649864423E-5 0.0 0.0 3.3581713483853837 0.0 30 4.84549649864423E-5 0.0 0.0 3.489678123358588 0.0 31 4.84549649864423E-5 0.0 0.0 3.6114454503695175 0.0 32 4.84549649864423E-5 0.0 0.0 3.7271559067571416 0.0 33 4.84549649864423E-5 0.0 0.0 3.8415580790901322 0.0 34 4.84549649864423E-5 0.0 0.0 3.9658450642803564 0.0 35 4.84549649864423E-5 0.0 0.0 4.096188920093886 0.0 36 4.84549649864423E-5 0.0 0.0 4.225369856747742 0.0 37 4.84549649864423E-5 0.0 0.0 4.357070451580892 0.0 38 4.84549649864423E-5 0.0 0.0 4.503452900804934 0.0 39 4.84549649864423E-5 0.0 0.0 4.720967238629074 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCGTAC 30 2.1663454E-6 45.000004 13 CGCGATC 25 3.8918894E-5 45.0 20 CGTACCC 20 7.0345943E-4 45.0 36 TCGCGCC 25 3.8918894E-5 45.0 32 CGTTTTT 13390 0.0 43.370052 1 CGGTCTA 235 0.0 43.085106 31 TAACGCG 90 0.0 42.5 1 ATAGCGG 400 0.0 42.1875 2 CGTAAGG 290 0.0 41.89655 2 TACGGGA 905 0.0 40.52486 4 CTCGTCG 50 1.0822987E-9 40.5 32 TATAGCG 135 0.0 40.0 1 CGCGTAA 45 1.929584E-8 40.0 31 CGACGGT 255 0.0 39.705883 28 ACGGGAT 1035 0.0 39.347828 5 GGCGATA 515 0.0 38.883495 8 ACGGGTC 105 0.0 38.57143 5 AGGGCGA 1080 0.0 38.541664 6 CGGGACT 795 0.0 38.490566 6 TAGGGAT 4360 0.0 37.826836 5 >>END_MODULE