##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547349_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1140783 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.327046423377627 31.0 31.0 33.0 30.0 34.0 2 31.735408925273255 31.0 31.0 34.0 30.0 34.0 3 31.696657471228097 31.0 31.0 34.0 30.0 34.0 4 35.55538082176891 37.0 35.0 37.0 33.0 37.0 5 35.48012461616276 37.0 35.0 37.0 33.0 37.0 6 35.528999818545685 37.0 35.0 37.0 33.0 37.0 7 35.92627169233763 37.0 35.0 37.0 35.0 37.0 8 35.915708771957505 37.0 35.0 37.0 35.0 37.0 9 37.62236814538786 39.0 37.0 39.0 35.0 39.0 10 36.97942553491768 39.0 37.0 39.0 32.0 39.0 11 36.7567442712593 39.0 37.0 39.0 32.0 39.0 12 36.55911772878803 39.0 35.0 39.0 32.0 39.0 13 36.4843173504514 39.0 35.0 39.0 32.0 39.0 14 37.62394074946769 40.0 36.0 41.0 32.0 41.0 15 37.711069502262916 40.0 36.0 41.0 32.0 41.0 16 37.73149494689174 40.0 36.0 41.0 32.0 41.0 17 37.632958240085976 40.0 36.0 41.0 32.0 41.0 18 37.40150580785303 39.0 36.0 41.0 32.0 41.0 19 37.245745246904974 39.0 36.0 41.0 32.0 41.0 20 36.977786309929236 39.0 35.0 41.0 32.0 41.0 21 36.87362890225398 38.0 35.0 41.0 31.0 41.0 22 36.800227562998394 38.0 35.0 40.0 31.0 41.0 23 36.700305842566024 38.0 35.0 40.0 31.0 41.0 24 36.56850251099464 38.0 35.0 40.0 31.0 41.0 25 36.471687428722205 38.0 35.0 40.0 31.0 41.0 26 36.35626670453539 38.0 35.0 40.0 30.0 41.0 27 36.26499255336028 38.0 35.0 40.0 30.0 41.0 28 36.269208955603304 38.0 35.0 40.0 30.0 41.0 29 36.23592392242872 38.0 35.0 40.0 30.0 41.0 30 36.13148337589182 38.0 35.0 40.0 30.0 41.0 31 35.950604102620744 38.0 35.0 40.0 30.0 41.0 32 35.68690013788775 38.0 35.0 40.0 27.0 41.0 33 35.283413234594136 38.0 34.0 40.0 25.0 41.0 34 34.83167526164047 38.0 34.0 40.0 23.0 41.0 35 34.52586337629506 38.0 34.0 40.0 21.0 41.0 36 34.32823069768747 38.0 33.0 40.0 20.0 41.0 37 34.22064581958181 38.0 33.0 40.0 18.0 41.0 38 34.11781118757906 38.0 33.0 40.0 18.0 41.0 39 34.05555657824494 38.0 33.0 40.0 18.0 41.0 40 33.91790726194202 38.0 33.0 40.0 18.0 41.0 41 33.81279612336439 38.0 33.0 40.0 18.0 41.0 42 33.72506515261886 38.0 33.0 40.0 17.0 41.0 43 33.678607587946175 38.0 33.0 40.0 17.0 41.0 44 33.54865824613445 37.0 33.0 40.0 16.0 41.0 45 33.46599572398958 37.0 33.0 40.0 17.0 41.0 46 33.37907559982924 37.0 32.0 40.0 17.0 41.0 47 33.27220426671856 37.0 32.0 40.0 15.0 41.0 48 33.20776694603619 37.0 32.0 40.0 15.0 41.0 49 33.0861872941655 36.0 32.0 40.0 15.0 41.0 50 33.023184076200295 36.0 32.0 40.0 15.0 41.0 51 32.613070145680645 36.0 31.0 40.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 4.0 12 1.0 13 7.0 14 17.0 15 58.0 16 128.0 17 330.0 18 782.0 19 1420.0 20 2411.0 21 3839.0 22 5791.0 23 8354.0 24 12448.0 25 19292.0 26 27799.0 27 31718.0 28 31387.0 29 30306.0 30 31875.0 31 35644.0 32 42033.0 33 51766.0 34 73163.0 35 92375.0 36 92911.0 37 113547.0 38 164974.0 39 266324.0 40 76.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.77219769228679 22.166091184738903 26.34523831438582 20.716472808588488 2 37.335935055133184 23.619040606320397 26.884604696949378 12.160419641597043 3 26.744700788844156 23.79541069598688 36.79805887710458 12.66182963806438 4 23.995887035483523 25.707693750695793 36.699354741436366 13.597064472384318 5 21.599638143275275 30.04068258380428 35.331171660166746 13.028507612753696 6 19.96321824571369 38.0508825955506 32.66563404258303 9.320265116152678 7 81.89015790031934 3.105323273576132 13.706024721616645 1.2984941044878824 8 82.45178969181694 2.5667458228251996 13.550868131800703 1.430596353557162 9 77.56120138536427 5.729836436903425 14.53089676125959 2.178065416472721 10 31.300080734022156 37.04017328448968 21.73314293778922 9.926603043698933 11 25.71838815971136 23.601947083713554 34.19528516816958 16.484379588405506 12 24.537795531665534 22.11174254875818 36.201363449490394 17.149098470085896 13 22.561170704682663 23.116754018950143 36.870552944775646 17.451522331591548 14 18.652714845855872 27.177210740342378 36.17182233606216 17.998252077739586 15 18.542615028449756 27.408367761441042 38.259160594083184 15.789856616026011 16 22.49411150060967 26.26161154224774 36.19294817682241 15.051328780320183 17 21.730162528719312 26.3784611096063 33.83211355709192 18.059262804582467 18 21.425196553595207 27.2748629669271 34.94845207195409 16.351488407523604 19 22.625337158776034 27.75628669080798 33.37944201482666 16.23893413558933 20 23.533397675105608 27.612613441820223 33.39793808287816 15.456050800196005 21 23.914627058783307 25.40991582097559 35.51210002252839 15.163357097712712 22 22.642693658653748 23.41163919869072 35.84397733837198 18.10168980428355 23 19.85399501921049 26.145813883972675 36.106516313795 17.893674783021837 24 19.409037476890873 26.724977493528566 36.532627151701945 17.333357877878615 25 20.35654458385162 27.628392078072693 34.50288091600243 17.51218242207326 26 19.561301316727196 29.426367679041498 33.0039981311082 18.00833287312311 27 18.49808421058168 28.6041254121073 35.43969361394762 17.45809676336341 28 17.851335442411045 28.246826960079176 36.41840735705213 17.48343024045765 29 18.969777775440203 27.163623581347196 35.712313384754154 18.154285258458444 30 19.442786226653098 26.887585106019284 35.841961179295275 17.827667488032343 31 21.251982191179216 26.90406501499409 33.784339352883066 18.059613440943632 32 21.11996760120023 27.493397079023797 33.62401087673992 17.762624443036053 33 21.04896373806412 27.68177646406021 32.806063905230005 18.463195892645665 34 19.762215951675298 28.958794091426675 32.93772785884783 18.341262098050198 35 19.970756927478757 29.020769068262766 32.26669752266645 18.74177648159203 36 21.699394188026996 29.65393067743822 30.70575210184584 17.940923032688953 37 20.271953561720327 30.43278169467813 30.46679342171123 18.828471321890316 38 20.127842017281115 30.99204669073785 29.72151583605296 19.158595455928076 39 20.482686014781077 29.95381242532541 29.997992606832323 19.565508953061187 40 21.040723783576716 29.26788004379448 30.527628830373526 19.163767342255277 41 19.595313043760296 29.355889770447142 30.837153078192785 20.21164410759978 42 20.169830721530737 29.751144608571483 30.13158506043656 19.94743960946122 43 20.40589665168573 29.447055224350294 30.259830309533015 19.887217814430965 44 20.031066381599306 29.604052655062358 30.66516594304088 19.69971502029746 45 20.43535010602367 29.528052223779632 30.102657560640367 19.933940109556332 46 20.247671993709584 29.954426038957454 30.14403265125795 19.653869316075014 47 20.190693585020114 29.51428974660387 30.78490826037906 19.510108407996963 48 20.24100990284743 29.387447042952076 30.910523736766766 19.461019317433728 49 20.538524855296757 28.791978842601967 31.34732898368927 19.322167318412003 50 19.33207279561494 29.051186772593912 31.780715526090415 19.836024905700732 51 19.51159861253192 29.459502815171685 31.482411641828463 19.546486930467932 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1165.0 1 1488.0 2 1811.0 3 18415.5 4 35020.0 5 24471.5 6 13923.0 7 13804.0 8 13685.0 9 14164.0 10 14643.0 11 14657.0 12 14671.0 13 14417.0 14 14163.0 15 13467.0 16 12771.0 17 12021.5 18 11272.0 19 10667.0 20 10062.0 21 9892.5 22 9723.0 23 9989.0 24 10255.0 25 11610.0 26 14852.0 27 16739.0 28 19728.5 29 22718.0 30 25745.5 31 28773.0 32 31610.5 33 34448.0 34 38424.0 35 42400.0 36 45319.0 37 48238.0 38 52026.5 39 55815.0 40 59462.5 41 63110.0 42 65332.0 43 67554.0 44 69582.5 45 71611.0 46 73830.0 47 76049.0 48 76644.0 49 77239.0 50 73194.0 51 69149.0 52 65032.5 53 60916.0 54 55834.5 55 50753.0 56 47739.0 57 44725.0 58 41024.5 59 37324.0 60 34031.0 61 30738.0 62 26866.0 63 22994.0 64 19655.5 65 16317.0 66 13648.5 67 10980.0 68 8784.5 69 6589.0 70 5267.0 71 3945.0 72 3294.0 73 2643.0 74 2045.5 75 1107.0 76 766.0 77 554.0 78 342.0 79 252.0 80 162.0 81 127.0 82 92.0 83 62.5 84 33.0 85 30.0 86 27.0 87 17.5 88 8.0 89 5.5 90 3.0 91 2.5 92 2.0 93 2.0 94 2.0 95 1.5 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1140783.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.92809194781126 #Duplication Level Percentage of deduplicated Percentage of total 1 76.92692624376168 23.792030481295566 2 6.398532996406995 3.9578883368795963 3 2.8628995246669073 2.656320592087298 4 1.7720703818483137 2.192270228311906 5 1.2501817228291103 1.933286763756591 6 0.9294962806843319 1.7248527860492155 7 0.8188374493175153 1.772755594596235 8 0.6859021430270165 1.6970915637392285 9 0.60277468633265 1.6778403830438362 >10 7.4616603490079605 50.221539297154 >50 0.26826821007773594 4.981633255216081 >100 0.02131330256969947 1.2649220553907539 >500 8.525321025591227E-4 0.19889651271084832 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 2.8417736751970763E-4 1.9286721497688268 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 21944 1.9235910773565175 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.765909029149277E-5 0.0 0.0 0.019460318044711395 0.0 2 8.765909029149277E-5 0.0 0.0 0.05478693143218298 0.0 3 8.765909029149277E-5 0.0 0.0 0.09616202204976758 0.0 4 8.765909029149277E-5 0.0 0.0 0.145514089883878 0.0 5 8.765909029149277E-5 0.0 0.0 0.2631525890550613 0.0 6 8.765909029149277E-5 0.0 0.0 0.49343301925081284 0.0 7 8.765909029149277E-5 0.0 0.0 0.6392977454958568 0.0 8 1.7531818058298554E-4 0.0 0.0 0.84853999402165 0.0 9 1.7531818058298554E-4 0.0 0.0 0.9753826976734401 0.0 10 1.7531818058298554E-4 0.0 0.0 1.1186176512097392 0.0 11 1.7531818058298554E-4 0.0 0.0 1.2515088320916423 0.0 12 1.7531818058298554E-4 0.0 0.0 1.352316785926859 0.0 13 1.7531818058298554E-4 0.0 0.0 1.4156943082076083 0.0 14 1.7531818058298554E-4 0.0 0.0 1.4533000579426587 0.0 15 1.7531818058298554E-4 0.0 0.0 1.4856462622602196 0.0 16 1.7531818058298554E-4 0.0 0.0 1.5298264437671318 0.0 17 1.7531818058298554E-4 0.0 0.0 1.5886456933527235 0.0 18 1.7531818058298554E-4 0.0 0.0 1.6641201700936987 0.0 19 1.7531818058298554E-4 0.0 0.0 1.7131216015666433 0.0 20 1.7531818058298554E-4 0.0 0.0 1.7691357602629072 0.0 21 1.7531818058298554E-4 0.0 0.0 1.833828168898029 0.0 22 1.7531818058298554E-4 0.0 0.0 1.9056209638467614 0.0 23 1.7531818058298554E-4 0.0 0.0 1.9908255996100923 0.0 24 1.7531818058298554E-4 0.0 0.0 2.060865212752995 0.0 25 1.7531818058298554E-4 0.0 0.0 2.125382303207534 0.0 26 1.7531818058298554E-4 0.0 0.0 2.187357280043619 0.0 27 1.7531818058298554E-4 0.0 0.0 2.250997779595243 0.0 28 1.7531818058298554E-4 0.0 0.0 2.326033960884761 0.0 29 1.7531818058298554E-4 0.0 0.0 2.4060667103208937 0.0 30 1.7531818058298554E-4 0.0 0.0 2.4992483233007503 0.0 31 1.7531818058298554E-4 0.0 0.0 2.5858555045087455 0.0 32 1.7531818058298554E-4 0.0 0.0 2.675092458425485 0.0 33 1.7531818058298554E-4 0.0 0.0 2.764767707793682 0.0 34 1.7531818058298554E-4 0.0 0.0 2.861893979836656 0.0 35 1.7531818058298554E-4 0.0 0.0 2.9614747064077918 0.0 36 1.7531818058298554E-4 0.0 0.0 3.0602665011663044 0.0 37 1.7531818058298554E-4 0.0 0.0 3.16396720498114 0.0 38 1.7531818058298554E-4 0.0 0.0 3.2830959086872786 0.0 39 1.7531818058298554E-4 0.0 0.0 3.445878839358581 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGATCG 30 2.1654869E-6 45.000004 9 CCGACCG 30 2.1654869E-6 45.000004 15 CAGGTCG 20 7.0332666E-4 45.0 31 CGTTTTT 12405 0.0 44.020557 1 GCGATAT 105 0.0 42.857143 9 GGCGATA 375 0.0 40.8 8 CGTTAGG 145 0.0 40.344826 2 ACGGGAC 280 0.0 39.375 5 CGAGGGT 200 0.0 39.375 4 TTGCGAG 80 0.0 39.375 1 TACGGGA 510 0.0 38.82353 4 ACGGGAT 545 0.0 38.80734 5 TAGGGAT 1910 0.0 38.520943 5 TAGGGAC 1325 0.0 38.377357 5 GTAGGGA 1585 0.0 37.76025 4 ATAGCGG 155 0.0 37.741936 2 GTTTTTT 14845 0.0 37.739975 2 ATGGGAC 980 0.0 37.65306 5 GGGCGAT 1285 0.0 37.645912 7 TCGTTAG 60 1.5643309E-10 37.500004 1 >>END_MODULE