##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547347_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2409253 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.399007908260362 31.0 31.0 33.0 30.0 34.0 2 31.797962688019897 31.0 31.0 34.0 30.0 34.0 3 31.70226954163801 31.0 31.0 34.0 30.0 34.0 4 35.58549724748708 37.0 35.0 37.0 33.0 37.0 5 35.54382042898774 37.0 35.0 37.0 33.0 37.0 6 35.58977699726845 37.0 35.0 37.0 33.0 37.0 7 35.97330666393276 37.0 35.0 37.0 35.0 37.0 8 35.96890488462606 37.0 35.0 37.0 35.0 37.0 9 37.678348849207616 39.0 37.0 39.0 35.0 39.0 10 37.09283790452891 39.0 37.0 39.0 33.0 39.0 11 36.86561643795815 39.0 37.0 39.0 32.0 39.0 12 36.617482680316265 39.0 35.0 39.0 32.0 39.0 13 36.528775931792964 39.0 35.0 39.0 32.0 39.0 14 37.615734835652376 40.0 36.0 41.0 32.0 41.0 15 37.72197191411612 40.0 36.0 41.0 32.0 41.0 16 37.75872770522648 40.0 36.0 41.0 32.0 41.0 17 37.672671570814686 40.0 36.0 41.0 32.0 41.0 18 37.41889207982723 39.0 36.0 41.0 32.0 41.0 19 37.21121858102906 38.0 36.0 41.0 32.0 41.0 20 36.88319034987193 38.0 35.0 41.0 32.0 41.0 21 36.78609967487848 38.0 35.0 40.0 31.0 41.0 22 36.73348295093957 38.0 35.0 40.0 31.0 41.0 23 36.64275607418565 38.0 35.0 40.0 31.0 41.0 24 36.49833454601904 38.0 35.0 40.0 31.0 41.0 25 36.404252687451255 38.0 35.0 40.0 31.0 41.0 26 36.28220655946055 38.0 35.0 40.0 31.0 41.0 27 36.20336593956716 38.0 35.0 40.0 30.0 41.0 28 36.188787146887435 38.0 35.0 40.0 30.0 41.0 29 36.12060169687451 38.0 35.0 40.0 30.0 41.0 30 35.984134501440906 38.0 35.0 40.0 30.0 41.0 31 35.7696759119943 38.0 35.0 40.0 29.0 41.0 32 35.47642194489329 38.0 34.0 40.0 27.0 41.0 33 35.01222287572123 38.0 34.0 40.0 24.0 41.0 34 34.49630611646016 38.0 34.0 40.0 21.0 41.0 35 34.15116220670888 38.0 33.0 40.0 18.0 41.0 36 33.92398058651374 38.0 33.0 40.0 18.0 41.0 37 33.79709810468224 38.0 33.0 40.0 18.0 41.0 38 33.672094628501036 37.0 33.0 40.0 17.0 41.0 39 33.61190418772956 37.0 33.0 40.0 16.0 41.0 40 33.449018430193924 37.0 33.0 40.0 15.0 41.0 41 33.33414963061165 37.0 33.0 40.0 15.0 41.0 42 33.25703112126456 37.0 33.0 40.0 15.0 41.0 43 33.20310486279357 37.0 32.0 40.0 15.0 41.0 44 33.071692761200254 37.0 32.0 40.0 15.0 41.0 45 33.01016829697836 37.0 32.0 40.0 15.0 41.0 46 32.951340934306195 36.0 32.0 40.0 15.0 41.0 47 32.8306122271094 36.0 31.0 40.0 13.0 41.0 48 32.74799159739554 36.0 31.0 40.0 13.0 41.0 49 32.62126559560163 36.0 31.0 40.0 13.0 41.0 50 32.56368218696833 36.0 31.0 40.0 12.0 41.0 51 32.15691834772023 35.0 31.0 39.0 12.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 2.0 11 8.0 12 7.0 13 13.0 14 49.0 15 91.0 16 262.0 17 637.0 18 1447.0 19 2983.0 20 5159.0 21 8052.0 22 12298.0 23 18591.0 24 28602.0 25 44611.0 26 64600.0 27 72876.0 28 70490.0 29 66291.0 30 68148.0 31 76764.0 32 89457.0 33 111868.0 34 161057.0 35 203990.0 36 202228.0 37 232127.0 38 333066.0 39 533344.0 40 133.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.977839604225874 21.81692831761546 24.75202894839189 23.453203129766777 2 39.50153844365868 22.913450766689923 26.05479789793766 11.530212891713738 3 25.999054478711862 23.01559861085573 38.75122288941842 12.234124021013983 4 22.684085067031152 25.500269170568636 38.579385394560056 13.236260367840154 5 20.951099780720416 28.43669801386571 37.51125348811436 13.100948717299513 6 19.896125479557355 36.336491020245695 34.68626997662761 9.081113523569337 7 78.55961993198721 3.2434534687722705 16.524914568955605 1.6720120302849057 8 78.96136271284087 2.7926913445785893 16.47506509279017 1.7708808497903707 9 73.7413629867847 5.801175717120618 17.71063479011959 2.7468265059750885 10 32.31570117376631 33.45456039693631 24.12320333314932 10.10653509614806 11 26.025369689277134 22.69915197781221 35.05588661713818 16.219591715772484 12 24.988948856761827 20.46999630175826 37.714428497131685 16.826626344348227 13 22.536736490522166 22.19692161844356 37.86044886112002 17.405893029914253 14 18.00827891466774 25.74947504475454 39.022178243629874 17.22006779694785 15 18.015044497194772 26.16445844417336 40.219022244654255 15.601474813977612 16 22.409062061975227 25.23354749376674 37.823300417183255 14.53409002707478 17 21.897907774733497 25.428753227660188 35.51793854775733 17.15540044984898 18 21.617654932877535 25.866731306342672 36.4198778625574 16.095735898222397 19 22.135989869059 27.50939814124959 34.34774181042838 16.006870179263032 20 22.67304430045329 27.426177325502966 34.98457820743608 14.916200166607657 21 23.054282800519495 25.34038558839607 36.85951620689069 14.745815404193749 22 21.78658696284699 22.733519476783883 37.87306688006615 17.60682668030298 23 19.54958653159299 25.29759224124656 37.45999278614575 17.692828441014704 24 19.44731416750337 26.210489309341938 37.2927210218271 17.049475501327592 25 20.327379482354075 27.093377075799012 35.21759649152663 17.361646950320285 26 18.786320905276447 28.303586215312382 34.691707346634 18.218385532777173 27 17.97561318798814 27.51276017919247 36.84009109877626 17.671535534043127 28 17.28411254442767 27.50628514315433 37.38229235368805 17.82730995872995 29 18.80109726956862 26.9189661691819 36.66746497773376 17.61247158351572 30 19.555480474653347 26.230329483869063 36.79248298123941 17.421707060238173 31 20.580320954254287 25.67111050603652 36.32727654588373 17.42129199382547 32 21.52854017407055 26.21297970781815 35.32621937173057 16.932260746380727 33 21.023736402943154 26.475343187286683 34.35222452768556 18.148695882084613 34 19.091436225253222 27.288748836257547 35.14894450686582 18.470870431623414 35 19.211390418523916 29.319253727192617 33.34780531558952 18.121550538693942 36 21.167930474715607 29.463655332171424 31.2728883184954 18.095525874617568 37 20.45036366043749 30.55544602414109 30.79506386419359 18.19912645122783 38 19.994330192802497 30.482850908559623 30.985039761287002 18.53777913735087 39 20.291642264220485 29.546253548298996 30.51422992935985 19.64787425812067 40 21.018921632555816 28.587782188089005 31.13230532451345 19.26099085484173 41 19.160461769685458 28.85794891611632 31.149696607205634 20.831892706992583 42 19.354131757851913 29.42609182182195 31.223246375536316 19.996530044789818 43 19.447438687427184 29.058384486809814 31.60485843537395 19.889318390389054 44 19.77658635269936 28.99064564825695 31.408449008883665 19.82431899016002 45 19.35164135937571 29.364661992742146 30.512486650426503 20.771209997455642 46 19.719307187746576 29.679697399982487 30.64223641103695 19.958759001233993 47 19.461799985306648 29.012602661488852 31.851864457572532 19.673732895631964 48 19.507042224291098 29.041698817019217 32.13435865805708 19.316900300632604 49 20.33775614267161 28.07824665985681 31.89378616525537 19.690211032216208 50 18.802466988730533 29.016296752561892 32.12829868843164 20.052937570275933 51 18.58297986969405 29.50221500191138 32.0791548251678 19.835650303226767 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2632.0 1 3652.5 2 4673.0 3 53119.0 4 101565.0 5 67750.0 6 33935.0 7 33833.0 8 33731.0 9 35279.5 10 36828.0 11 37580.0 12 38332.0 13 37654.5 14 36977.0 15 34068.0 16 31159.0 17 28568.5 18 25978.0 19 24472.5 20 22967.0 21 22677.0 22 22387.0 23 22998.0 24 23609.0 25 25453.0 26 31244.0 27 35191.0 28 38899.5 29 42608.0 30 47571.5 31 52535.0 32 57797.5 33 63060.0 34 69103.5 35 75147.0 36 83274.5 37 91402.0 38 97434.5 39 103467.0 40 111331.5 41 119196.0 42 127470.5 43 135745.0 44 146112.0 45 156479.0 46 158554.5 47 160630.0 48 156315.0 49 152000.0 50 143274.5 51 134549.0 52 126518.0 53 118487.0 54 114763.0 55 111039.0 56 106835.5 57 102632.0 58 96622.0 59 90612.0 60 80983.5 61 71355.0 62 62111.0 63 52867.0 64 45060.5 65 37254.0 66 30171.0 67 23088.0 68 19606.0 69 16124.0 70 12583.0 71 9042.0 72 7428.0 73 5814.0 74 4690.5 75 2607.5 76 1648.0 77 1240.0 78 832.0 79 636.5 80 441.0 81 316.0 82 191.0 83 144.5 84 98.0 85 77.5 86 57.0 87 35.0 88 13.0 89 9.5 90 6.0 91 4.5 92 3.0 93 2.5 94 2.0 95 2.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2409253.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.307635093811506 #Duplication Level Percentage of deduplicated Percentage of total 1 79.1994996446991 21.62751035909897 2 6.528205444529742 3.5653970419330343 3 2.7207304324366888 2.2289014151282722 4 1.7180342343626194 1.87661807802601 5 1.1840902949020424 1.6167352845654317 6 0.8336050123648856 1.3658268894019514 7 0.6441801667569151 1.231372584992794 8 0.48628552470453235 1.0623446128027225 9 0.42027938747335214 1.0329152535515622 >10 4.856326114518841 31.558288837132743 >50 1.2528395071852674 23.364497826921774 >100 0.15159328570248123 5.459292479068697 >500 0.002938859175343408 0.5608860475755905 >1k 0.001237414389618277 0.56806660545554 >5k 0.0 0.0 >10k+ 1.5467679870228462E-4 2.8813466843449413 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 68216 2.831417040883627 No Hit CGTTTCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTT 2622 0.10883041341029773 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.301328254027286E-5 0.0 0.0 0.024696451555731174 0.0 2 8.301328254027286E-5 0.0 0.0 0.07201402260368671 0.0 3 8.301328254027286E-5 0.0 0.0 0.12771593518820978 0.0 4 8.301328254027286E-5 0.0 0.0 0.209317991925298 0.0 5 8.301328254027286E-5 0.0 0.0 0.42714484531097396 0.0 6 8.301328254027286E-5 0.0 0.0 0.8916041611238006 0.0 7 8.301328254027286E-5 0.0 0.0 1.2178048548658027 0.0 8 1.245199238104093E-4 0.0 0.0 1.6171817571670555 0.0 9 1.245199238104093E-4 0.0 0.0 1.9111317906421617 0.0 10 1.245199238104093E-4 0.0 0.0 2.2299027955968094 0.0 11 1.245199238104093E-4 0.0 0.0 2.4835913870398834 0.0 12 1.245199238104093E-4 0.0 0.0 2.6592059862538306 0.0 13 1.245199238104093E-4 0.0 0.0 2.7656705211117303 0.0 14 1.245199238104093E-4 0.0 0.0 2.844948205937691 0.0 15 1.245199238104093E-4 0.0 0.0 2.89641644111266 0.0 16 1.245199238104093E-4 0.0 0.0 2.961083788211533 0.0 17 1.245199238104093E-4 0.0 0.0 3.0323506912723572 0.0 18 1.245199238104093E-4 0.0 0.0 3.1268198068031876 0.0 19 1.245199238104093E-4 0.0 0.0 3.1934379660417567 0.0 20 1.245199238104093E-4 0.0 0.0 3.272300584455016 0.0 21 1.245199238104093E-4 0.0 0.0 3.3640717683032872 0.0 22 1.245199238104093E-4 0.0 0.0 3.46227648154843 0.0 23 1.245199238104093E-4 0.0 0.0 3.572103054349211 0.0 24 1.245199238104093E-4 0.0 0.0 3.6629610920895397 0.0 25 1.245199238104093E-4 0.0 0.0 3.7477591602044287 0.0 26 1.245199238104093E-4 0.0 0.0 3.831561068928834 0.0 27 1.245199238104093E-4 0.0 0.0 3.9273999036215788 0.0 28 1.245199238104093E-4 0.0 0.0 4.025272563736561 0.0 29 1.245199238104093E-4 0.0 0.0 4.143524984715179 0.0 30 1.245199238104093E-4 0.0 0.0 4.285104138087615 0.0 31 1.245199238104093E-4 0.0 0.0 4.406469557161493 0.0 32 1.245199238104093E-4 0.0 0.0 4.530242361429041 0.0 33 1.245199238104093E-4 0.0 0.0 4.655758444629933 0.0 34 1.245199238104093E-4 0.0 0.0 4.781233021189555 0.0 35 1.245199238104093E-4 0.0 0.0 4.926713798841384 0.0 36 1.245199238104093E-4 0.0 0.0 5.053724121128001 0.0 37 1.245199238104093E-4 0.0 0.0 5.19650696709727 0.0 38 1.6602656508054572E-4 0.0 0.0 5.382664253193832 0.0 39 2.0753320635068215E-4 0.0 0.0 5.70450674960247 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGCGA 20 7.034827E-4 45.000004 40 CGTTTTT 32485 0.0 43.98184 1 ACGTTAG 100 0.0 42.75 1 CGGTCTA 315 0.0 41.428574 31 ATACGCG 55 6.184564E-11 40.909092 1 CGTTAGG 255 0.0 40.588234 2 GACCGTA 45 1.9297659E-8 40.000004 9 TAGGGAT 3465 0.0 39.415585 5 ATATGCG 110 0.0 38.86364 1 CATACGA 250 0.0 38.699997 18 GTTTTTT 37515 0.0 38.58257 2 CGACGGT 335 0.0 38.28358 28 ATAGGGC 735 0.0 38.265305 4 GGGCGAT 2500 0.0 38.16 7 ACGGGAT 910 0.0 38.076923 5 ACGGTCT 355 0.0 38.028168 30 TTAGGGA 3355 0.0 37.690014 4 AGTACGG 245 0.0 37.65306 2 GTAGGGA 3275 0.0 37.648857 4 GTACGTC 30 1.1402934E-4 37.500004 44 >>END_MODULE