##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547346_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2187115 Sequences flagged as poor quality 0 Sequence length 51 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.424770073818706 31.0 31.0 33.0 30.0 34.0 2 31.835795557160917 31.0 31.0 34.0 30.0 34.0 3 31.764345724847573 31.0 31.0 34.0 30.0 34.0 4 35.616411116928006 37.0 35.0 37.0 33.0 37.0 5 35.557887902556566 37.0 35.0 37.0 33.0 37.0 6 35.61028158098682 37.0 35.0 37.0 33.0 37.0 7 36.016976244961974 37.0 35.0 37.0 35.0 37.0 8 36.021187729040314 37.0 35.0 37.0 35.0 37.0 9 37.74312416128096 39.0 38.0 39.0 35.0 39.0 10 37.1550357434337 39.0 37.0 39.0 33.0 39.0 11 36.85330126673723 39.0 37.0 39.0 32.0 39.0 12 36.755049002910226 39.0 35.0 39.0 32.0 39.0 13 36.717503652071336 39.0 35.0 39.0 32.0 39.0 14 37.91973444469084 40.0 37.0 41.0 33.0 41.0 15 37.99554710200424 40.0 37.0 41.0 33.0 41.0 16 37.99939783687643 40.0 37.0 41.0 33.0 41.0 17 37.90541466726715 40.0 37.0 41.0 33.0 41.0 18 37.658882134684276 39.0 36.0 41.0 33.0 41.0 19 37.483265397567116 39.0 36.0 41.0 33.0 41.0 20 37.198839567192394 39.0 35.0 41.0 32.0 41.0 21 37.097717769756045 39.0 35.0 41.0 32.0 41.0 22 37.021981468738495 39.0 35.0 41.0 32.0 41.0 23 36.93087103330186 38.0 35.0 41.0 32.0 41.0 24 36.799755842742606 38.0 35.0 40.0 31.0 41.0 25 36.729516280579666 38.0 35.0 40.0 31.0 41.0 26 36.62625467796618 38.0 35.0 40.0 31.0 41.0 27 36.545182123482306 38.0 35.0 40.0 31.0 41.0 28 36.53548807447254 38.0 35.0 40.0 31.0 41.0 29 36.50874096698162 38.0 35.0 40.0 31.0 41.0 30 36.402436543117304 38.0 35.0 40.0 30.0 41.0 31 36.21970266766951 38.0 35.0 40.0 30.0 41.0 32 35.93730828054309 38.0 35.0 41.0 29.0 41.0 33 35.51482020835667 38.0 35.0 40.0 26.0 41.0 34 35.07430107698955 38.0 34.0 40.0 23.0 41.0 35 34.764983551390756 38.0 34.0 40.0 21.0 41.0 36 34.581813027664296 38.0 34.0 40.0 21.0 41.0 37 34.47055093124961 38.0 34.0 40.0 20.0 41.0 38 34.36899385720458 38.0 34.0 40.0 18.0 41.0 39 34.31536430411752 38.0 33.0 40.0 18.0 41.0 40 34.19165338813917 38.0 33.0 40.0 18.0 41.0 41 34.08433301403904 38.0 33.0 40.0 18.0 41.0 42 34.00624567066661 38.0 33.0 40.0 18.0 41.0 43 33.95472254545371 38.0 33.0 40.0 18.0 41.0 44 33.833387361889976 38.0 33.0 40.0 17.0 41.0 45 33.7505581553782 38.0 33.0 40.0 17.0 41.0 46 33.67895743936647 38.0 33.0 40.0 17.0 41.0 47 33.570101709329414 37.0 33.0 40.0 17.0 41.0 48 33.50798837738299 37.0 33.0 40.0 17.0 41.0 49 33.39001378528335 37.0 32.0 40.0 15.0 41.0 50 33.33213159801839 37.0 32.0 40.0 15.0 41.0 51 32.9105744325287 36.0 31.0 40.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 4.0 12 3.0 13 12.0 14 14.0 15 61.0 16 196.0 17 460.0 18 1136.0 19 2144.0 20 3623.0 21 6035.0 22 9232.0 23 14298.0 24 21642.0 25 35154.0 26 51044.0 27 59139.0 28 58341.0 29 55602.0 30 56427.0 31 63498.0 32 75507.0 33 93418.0 34 131110.0 35 173538.0 36 176629.0 37 216085.0 38 323947.0 39 558660.0 40 155.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.108718563038526 22.063265991957444 27.35786641306013 22.470149031943908 2 38.080210688509744 23.394471712735726 26.703854164047158 11.821463434707367 3 25.625721555565207 23.54855597442293 38.60359423258494 12.22212823742693 4 23.363060470071304 25.990311437670172 37.46327925143397 13.183348840824557 5 21.201948685825847 29.44659974441216 36.547963870212584 12.803487699549407 6 19.88537411155792 37.36127272685707 33.39454029623499 9.358812865350016 7 81.75002228963726 2.5800655201029667 14.414056874009825 1.2558553162499457 8 82.73698456642656 1.999803393968767 14.162081097701767 1.1011309419029178 9 77.85196480294817 5.365378592346539 15.055449759157613 1.7272068455476735 10 31.94710840536506 40.86698687540435 19.557636429725918 7.628268289504667 11 21.203869023805332 24.190726139229078 38.03471696732911 16.570687869636487 12 22.743888638686123 22.667440898169506 37.69248530598528 16.89618515715909 13 21.361473905121585 23.33672440635266 37.85251347094231 17.449288217583437 14 16.91218797365479 27.75112419785882 36.82677865590058 18.509909172585804 15 16.39676011549461 28.677367216630127 39.04668936018453 15.879183307690726 16 20.534539793289333 27.40422885856482 37.58288887415614 14.478342473989708 17 20.35553686020168 26.64418651968461 35.570374671656495 17.429901948457214 18 19.690002583311806 27.59297064854843 36.36598898549002 16.351037782649747 19 21.107486346168354 27.553786609300378 34.881750616679966 16.456976427851302 20 22.187905071292548 27.920891219711812 34.92280927157466 14.968394437420987 21 22.615088827062134 25.407991806557956 36.72893286361257 15.247986502767343 22 21.598681367920754 23.542886405150163 37.08190927317494 17.776522953754146 23 18.77788776538957 26.322392741122435 37.31710495332893 17.582614540159067 24 17.921188414875303 26.996019870925853 37.97431776564103 17.108473948557805 25 18.925205121815726 29.023530998598613 35.391508905567385 16.659754974018284 26 18.778253544052326 30.690155753126835 33.81481997974501 16.716770723075832 27 17.754301899991543 29.64508039129172 36.02037387151567 16.58024383720106 28 17.214183982095136 28.61331022831447 37.65517588238387 16.517329907206527 29 17.913872841620126 27.316350534836985 37.18039517812278 17.58938144542011 30 18.559655070721018 27.547796983697705 36.53273833337525 17.359809612206035 31 19.721093769646313 28.21250825859637 34.83227905254182 17.234118919215497 32 20.279180564350753 28.874339026525814 34.28818329168791 16.558297117435526 33 20.331944136453732 28.581350317655907 33.77481293850575 17.311892607384614 34 19.206123134814586 29.44481657343121 33.58497381253386 17.764086479220342 35 19.60020392160449 29.30970707987463 32.76764139059903 18.322447607921852 36 20.20776228044707 30.205910525966857 31.86275070126628 17.723576492319793 37 19.675645770798518 30.467990937833626 32.088847637184145 17.767515654183708 38 19.678526277767745 30.74296504756266 31.296616775981146 18.281891898688453 39 19.572496187900498 30.430955848229292 30.97034220880018 19.026205755070038 40 20.61651993608018 29.46086511225976 31.947748518024888 17.974866433635178 41 18.690238053325956 29.962347658902257 32.08194356492457 19.265470722847223 42 19.5172636098239 30.660847737773278 30.947526764710588 18.874361887692235 43 19.82817547316899 30.122741602522048 30.98383029698941 19.065252627319552 44 19.87673259065024 30.65385222084801 31.09223794816459 18.377177240337154 45 19.715195588709328 30.28949095040727 30.42674939360756 19.56856406727584 46 19.278455865375165 31.03183874647652 30.501322518477537 19.188382869670775 47 19.71382391872398 30.019683464289713 31.3219469483772 18.944545668609102 48 19.64277141348306 29.528122663874555 31.920955230977793 18.90815069166459 49 19.359292949844885 29.602330010081772 31.881954081061124 19.156422959012215 50 18.773361254437923 30.232840980012483 31.84583343811368 19.147964327435915 51 18.637291591891604 30.052374932273796 31.772220482233443 19.53811299360116 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2204.0 1 2721.5 2 3239.0 3 41295.5 4 79352.0 5 54013.0 6 28674.0 7 27990.0 8 27306.0 9 28188.0 10 29070.0 11 29555.0 12 30040.0 13 29468.5 14 28897.0 15 27608.5 16 26320.0 17 24589.0 18 22858.0 19 21895.0 20 20932.0 21 20591.5 22 20251.0 23 20845.0 24 21439.0 25 24078.0 26 30171.0 27 33625.0 28 38985.0 29 44345.0 30 50723.5 31 57102.0 32 64091.5 33 71081.0 34 79957.0 35 88833.0 36 94232.0 37 99631.0 38 107793.5 39 115956.0 40 123466.5 41 130977.0 42 137205.5 43 143434.0 44 145698.5 45 147963.0 46 150111.0 47 152259.0 48 150287.0 49 148315.0 50 140410.5 51 132506.0 52 119262.0 53 106018.0 54 99206.5 55 92395.0 56 83474.0 57 74553.0 58 67224.5 59 59896.0 60 53360.0 61 46824.0 62 39033.0 63 31242.0 64 25028.0 65 18814.0 66 14787.5 67 10761.0 68 8217.0 69 5673.0 70 4435.0 71 3197.0 72 2667.0 73 2137.0 74 1680.5 75 839.0 76 454.0 77 353.0 78 252.0 79 203.5 80 155.0 81 130.5 82 106.0 83 67.5 84 29.0 85 28.5 86 28.0 87 20.5 88 13.0 89 13.0 90 13.0 91 7.5 92 2.0 93 2.0 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2187115.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.354328726998425 #Duplication Level Percentage of deduplicated Percentage of total 1 77.22530289718237 19.57995715697186 2 6.28802277597192 3.1885719300969053 3 2.8734250759601445 2.185612918448818 4 1.7950628423758903 1.8205045356487397 5 1.2194944597115678 1.5459731706140214 6 0.8879974364477662 1.3508747347457135 7 0.6990064787721854 1.2405988031564146 8 0.5963628783648434 1.2096304366912976 9 0.4938515371043604 1.1269146792669673 >10 6.571925571032159 39.582828034850436 >50 1.25749000961791 21.017449405631655 >100 0.08877031273665026 3.0580836235995985 >500 0.0021918164814410347 0.3656176840848358 >1k 9.132568672670979E-4 0.35269718581255344 >5k 0.0 0.0 >10k+ 1.8265137345341957E-4 2.3746857003802675 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 51278 2.34454978361906 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.3716699853459922E-4 0.0 0.0 0.01376242218630479 0.0 2 1.3716699853459922E-4 0.0 0.0 0.05162051378185418 0.0 3 1.3716699853459922E-4 0.0 0.0 0.10026907592879204 0.0 4 1.3716699853459922E-4 0.0 0.0 0.16501189923712287 0.0 5 1.3716699853459922E-4 0.0 0.0 0.3368821484009757 0.0 6 1.3716699853459922E-4 0.0 0.0 0.7049012054693055 0.0 7 1.3716699853459922E-4 0.0 0.0 0.9470924025485629 0.0 8 1.3716699853459922E-4 0.0 0.0 1.2108188183977522 0.0 9 1.3716699853459922E-4 0.0 0.0 1.3814088422419488 0.0 10 1.3716699853459922E-4 0.0 0.0 1.545917795817778 0.0 11 1.3716699853459922E-4 0.0 0.0 1.7083235220827437 0.0 12 1.3716699853459922E-4 0.0 0.0 1.8319109877624176 0.0 13 1.3716699853459922E-4 0.0 0.0 1.9100504545942942 0.0 14 1.3716699853459922E-4 0.0 0.0 1.958104626414249 0.0 15 1.3716699853459922E-4 0.0 0.0 2.0024095669409245 0.0 16 1.3716699853459922E-4 0.0 0.0 2.0578250343489026 0.0 17 1.3716699853459922E-4 0.0 0.0 2.126820034611806 0.0 18 1.3716699853459922E-4 0.0 0.0 2.204913779110838 0.0 19 1.3716699853459922E-4 0.0 0.0 2.26572448179451 0.0 20 1.3716699853459922E-4 0.0 0.0 2.333210645073533 0.0 21 1.3716699853459922E-4 0.0 0.0 2.4043545949801453 0.0 22 1.3716699853459922E-4 0.0 0.0 2.4874777960921124 0.0 23 1.3716699853459922E-4 0.0 0.0 2.5766363451396015 0.0 24 1.3716699853459922E-4 0.0 0.0 2.6515752486723376 0.0 25 1.3716699853459922E-4 0.0 0.0 2.720021580941103 0.0 26 1.3716699853459922E-4 0.0 0.0 2.787324854888746 0.0 27 1.3716699853459922E-4 0.0 0.0 2.8583316377968235 0.0 28 1.3716699853459922E-4 0.0 0.0 2.933133374331025 0.0 29 1.3716699853459922E-4 0.0 0.0 3.0185884144180806 0.0 30 1.3716699853459922E-4 0.0 0.0 3.12146366331903 0.0 31 1.3716699853459922E-4 0.0 0.0 3.2156973913122995 0.0 32 1.3716699853459922E-4 0.0 0.0 3.3113027892909153 0.0 33 1.3716699853459922E-4 0.0 0.0 3.399958392677111 0.0 34 1.3716699853459922E-4 0.0 0.0 3.501004748264266 0.0 35 1.3716699853459922E-4 0.0 0.0 3.601548158190127 0.0 36 1.3716699853459922E-4 0.0 0.0 3.6992567834796066 0.0 37 1.3716699853459922E-4 0.0 0.0 3.802817867373229 0.0 38 1.3716699853459922E-4 0.0 0.0 3.914151747850479 0.0 39 1.3716699853459922E-4 0.0 0.0 4.050450022061026 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCCGTAG 20 7.034686E-4 45.0 28 CGTTTTT 26585 0.0 44.043633 1 CGACGGT 175 0.0 42.42857 28 TCGCGAG 65 0.0 41.538464 1 GCGCGAC 150 0.0 40.5 9 TACGGGA 1220 0.0 39.836063 4 CTATGCG 130 0.0 39.807693 1 CGACGCT 35 6.250879E-6 38.571426 39 CGGTACG 35 6.250879E-6 38.571426 1 GTTTTTT 30690 0.0 38.54839 2 GCGTAAG 135 0.0 38.333336 1 ACGGGAT 1405 0.0 38.274017 5 ATAGGGA 3930 0.0 38.12977 4 AGGGCGA 1220 0.0 37.991802 6 AGGGATC 3470 0.0 37.932274 6 TAGGGAT 4705 0.0 37.635494 5 CGAGGGA 2005 0.0 37.593517 4 TAAGGGA 3635 0.0 37.572216 4 TAGGGAC 3015 0.0 37.53731 5 CGCGGAT 30 1.1402591E-4 37.499996 4 >>END_MODULE