##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547345_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1864164 Sequences flagged as poor quality 0 Sequence length 51 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.236528009338233 31.0 31.0 33.0 30.0 34.0 2 31.628111582457336 31.0 31.0 34.0 30.0 34.0 3 31.620562353955982 31.0 31.0 34.0 30.0 34.0 4 35.46865243615905 37.0 35.0 37.0 33.0 37.0 5 35.37034563482612 37.0 35.0 37.0 33.0 37.0 6 35.41875929371021 37.0 35.0 37.0 33.0 37.0 7 35.876834334318225 37.0 35.0 37.0 35.0 37.0 8 35.862575395726985 37.0 35.0 37.0 35.0 37.0 9 37.55979302250231 39.0 37.0 39.0 35.0 39.0 10 36.85730922815804 39.0 37.0 39.0 32.0 39.0 11 36.57961960428374 39.0 35.0 39.0 32.0 39.0 12 36.228003008319014 38.0 35.0 39.0 32.0 39.0 13 36.05774974733983 38.0 35.0 39.0 31.0 39.0 14 37.166853345521105 39.0 35.0 41.0 31.0 41.0 15 37.31699195993485 39.0 35.0 41.0 32.0 41.0 16 37.391727873727845 39.0 35.0 41.0 32.0 41.0 17 37.316620211526455 39.0 35.0 41.0 32.0 41.0 18 37.128997234148926 39.0 35.0 40.0 32.0 41.0 19 37.00773268875485 38.0 35.0 40.0 32.0 41.0 20 36.75937202949955 38.0 35.0 40.0 31.0 41.0 21 36.63667359738736 38.0 35.0 40.0 31.0 41.0 22 36.55586150145588 38.0 35.0 40.0 31.0 41.0 23 36.45657731830461 38.0 35.0 40.0 31.0 41.0 24 36.30740160200497 38.0 35.0 40.0 31.0 41.0 25 36.20658911984139 38.0 35.0 40.0 30.0 41.0 26 36.01841093380196 38.0 35.0 40.0 30.0 41.0 27 35.90259172476242 37.0 35.0 40.0 30.0 41.0 28 35.892470834111165 37.0 35.0 40.0 30.0 41.0 29 35.86447758888166 37.0 35.0 40.0 30.0 41.0 30 35.740465967586545 37.0 35.0 40.0 30.0 41.0 31 35.56776549702708 37.0 34.0 40.0 29.0 41.0 32 35.344583952914014 37.0 34.0 40.0 27.0 41.0 33 35.029652434013315 37.0 34.0 40.0 25.0 41.0 34 34.68760205647143 37.0 34.0 40.0 24.0 41.0 35 34.44058730884193 37.0 33.0 40.0 23.0 41.0 36 34.245591053147685 37.0 33.0 40.0 22.0 41.0 37 34.1258773369725 37.0 33.0 40.0 21.0 41.0 38 34.05513087904283 37.0 33.0 40.0 21.0 41.0 39 34.02065108005519 37.0 33.0 40.0 21.0 41.0 40 33.85547087058864 36.0 33.0 40.0 21.0 41.0 41 33.790925583800565 36.0 33.0 40.0 20.0 41.0 42 33.7052898779292 36.0 33.0 40.0 20.0 41.0 43 33.632605822234524 36.0 33.0 40.0 19.0 41.0 44 33.47430537227412 36.0 33.0 40.0 18.0 41.0 45 33.37037674796853 36.0 33.0 40.0 19.0 41.0 46 33.273313399464854 35.0 32.0 40.0 19.0 41.0 47 33.119090916893576 35.0 32.0 40.0 18.0 41.0 48 33.059474381009395 35.0 32.0 40.0 18.0 41.0 49 32.94076433189355 35.0 32.0 40.0 18.0 41.0 50 32.837942369877325 35.0 32.0 40.0 18.0 41.0 51 32.42634821828981 35.0 31.0 39.0 17.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 2.0 11 2.0 12 10.0 13 14.0 14 27.0 15 74.0 16 207.0 17 541.0 18 1181.0 19 2336.0 20 3913.0 21 6509.0 22 9768.0 23 14316.0 24 20798.0 25 30643.0 26 41593.0 27 46748.0 28 47683.0 29 49554.0 30 55009.0 31 63558.0 32 76767.0 33 95498.0 34 142763.0 35 196437.0 36 171000.0 37 175831.0 38 237702.0 39 373540.0 40 139.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.80630244978446 22.52071169703953 28.15878860443609 18.514197248739915 2 34.64684437635315 24.471022935750288 28.28790814542068 12.594224542475876 3 25.94921906012561 24.011621295122104 37.23374123735895 12.80541840739334 4 24.45653923152684 25.97491422428499 36.31767376690034 13.250872777287837 5 21.579968286052083 30.81499267231853 34.3803442186417 13.224694822987676 6 19.374475636263764 39.298151879341084 31.780251093787886 9.547121390607265 7 81.80771648846347 3.874229949725453 12.322950126705589 1.9951034351054948 8 81.90411358657286 3.787810514525546 12.164702247227176 2.1433736516744237 9 77.2404681133205 6.569218158917349 13.540225001662945 2.650088726099206 10 37.37879285298933 31.001939743498962 20.52555461858506 11.093712784926648 11 30.19267618085104 25.760287185033075 28.72563787306267 15.321398761053212 12 28.57334440532056 23.100381726071312 31.903845369827977 16.42242849878015 13 21.362712722700365 30.311496198832295 31.499106301806062 16.82668477666128 14 16.167622591145413 34.39632993663648 32.16170894835433 17.27433852386378 15 16.333434182829407 30.040221783062005 38.302692252398394 15.323651781710193 16 18.299838426232885 27.830384022006648 37.91721114665877 15.952566405101699 17 17.63331981520939 29.227042255938855 31.059499056949925 22.080138871901827 18 18.947796438510775 31.123656502324902 33.185224046811335 16.743323012352988 19 22.786621777912245 32.08719833662704 28.49856557684839 16.627614308612333 20 23.127632547350984 30.547205074231666 30.106042172255233 16.219120206162117 21 20.879171575033098 31.274662529691593 31.59443053293594 16.251735362339364 22 20.233252010016287 28.399754528035086 30.979034033486325 20.387959428462302 23 17.387794206947458 32.46651045723445 31.115341783233664 19.03035355258443 24 17.989297079012363 29.84361890906594 35.36614804276877 16.800935969152928 25 17.898586175894398 32.12995208576069 31.581180625738938 18.390281112605972 26 16.61516905164996 35.10286648599587 29.802849963844384 18.479114498509787 27 17.373042285979132 34.949231934529365 30.924907894369806 16.752817885121697 28 16.342392622108356 32.93014992243172 34.04582429442903 16.681633161030895 29 17.335170081602264 30.405157486143924 33.5319210112415 18.727751421012314 30 18.26459474595583 31.912535592362048 32.18606302878931 17.636806632892814 31 21.958207539679986 31.70933458644197 29.1807480457728 17.15170982810525 32 21.94962460384387 32.03425235118799 29.37134286468358 16.64478018028457 33 21.119976568585166 31.852025894717418 28.37459579736547 18.653401739331947 34 18.127428702624876 32.287127098259596 29.52336811568081 20.062076083434718 35 18.557862934806167 31.532150604775115 30.379462321984548 19.53052413843417 36 21.22179164494111 33.457571329561134 27.638662692767372 17.681974332730384 37 18.07818410826515 35.497413317712386 29.120774781617925 17.30362779240453 38 17.410592630262144 35.25655468081135 28.26897204323225 19.06388064569426 39 18.76299510128937 34.214264410212834 27.965350688029595 19.0573898004682 40 19.910587265927244 32.2143867170485 28.984252458474685 18.89077355854957 41 16.890788578687282 31.86329099800232 29.31614385858755 21.929776564722847 42 18.137460008883338 33.170257552447104 27.953280934510055 20.739001504159503 43 19.21542310655071 32.28787810514525 27.558304956001727 20.938393832302307 44 18.611184423688044 33.76156818820662 27.62965061013945 19.99759677796589 45 17.920472662276495 35.64852663177703 25.756639437302724 20.674361268643747 46 19.854154462804775 34.696142614061856 27.015541551065247 18.43416137206812 47 18.84887810299952 32.74234455766767 28.66362616164672 19.745151177686083 48 18.933849167777083 31.746026637141366 30.06929647820685 19.250827716874696 49 18.903272458860915 31.27224857898769 29.53972933711841 20.28474962503299 50 17.457959707407717 33.01474548376645 29.75569746009471 19.77159734873112 51 17.2356080259033 32.77554979068365 28.365154567945737 21.623687615467308 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3556.0 1 3968.5 2 4381.0 3 31268.0 4 58155.0 5 37922.5 6 17690.0 7 18881.0 8 20072.0 9 23736.0 10 27400.0 11 30506.5 12 33613.0 13 33483.5 14 33354.0 15 30396.0 16 27438.0 17 24777.0 18 22116.0 19 20306.5 20 18497.0 21 17471.5 22 16446.0 23 16562.0 24 16678.0 25 18826.0 26 22049.0 27 23124.0 28 28824.5 29 34525.0 30 36870.0 31 39215.0 32 44653.5 33 50092.0 34 56209.5 35 62327.0 36 66940.5 37 71554.0 38 76287.0 39 81020.0 40 93260.0 41 105500.0 42 115800.5 43 126101.0 44 133728.5 45 141356.0 46 141428.5 47 141501.0 48 144026.0 49 146551.0 50 132760.0 51 118969.0 52 105007.0 53 91045.0 54 83024.5 55 75004.0 56 67525.5 57 60047.0 58 56363.0 59 52679.0 60 48049.5 61 43420.0 62 37957.5 63 32495.0 64 25732.0 65 18969.0 66 15021.5 67 11074.0 68 8320.5 69 5567.0 70 5389.5 71 5212.0 72 4181.5 73 3151.0 74 2265.0 75 1137.5 76 896.0 77 688.0 78 480.0 79 396.5 80 313.0 81 208.0 82 103.0 83 73.5 84 44.0 85 39.0 86 34.0 87 25.5 88 17.0 89 20.0 90 23.0 91 14.5 92 6.0 93 3.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1864164.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.724007259877883 #Duplication Level Percentage of deduplicated Percentage of total 1 79.11262646511753 20.350937775366905 2 7.836982702214379 4.031971998546002 3 2.9848595735479764 2.3034764801899246 4 1.8063714435956324 1.858684485163606 5 1.179622088383497 1.5172303582744693 6 0.8900508648306789 1.3737404945138982 7 0.6737738580254251 1.2132514530753375 8 0.5122873239550798 1.054246627245111 9 0.4053319321602456 0.9384085408995441 >10 3.1043674327081314 16.841752274406662 >50 0.73231939716177 13.592824130903661 >100 0.7538495298487112 30.59366872562686 >500 0.004408476596429326 0.8108363403965804 >1k 0.00293898439761955 1.1324707888416041 >5k 0.0 0.0 >10k+ 2.09927456972825E-4 2.3864995265498554 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 44193 2.370660521284608 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2959 0.1587306696191966 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 1996 0.10707212455556485 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.072866979514678E-4 0.0 0.0 0.07837293285354723 0.0 2 1.072866979514678E-4 0.0 0.0 0.23452872172190858 0.0 3 1.072866979514678E-4 0.0 0.0 0.35184672593183863 0.0 4 1.072866979514678E-4 0.0 0.0 0.5399739507897374 0.0 5 1.072866979514678E-4 0.0 0.0 1.0112844148905353 0.0 6 1.072866979514678E-4 0.0 0.0 1.622979523260829 0.0 7 1.072866979514678E-4 0.0 0.0 2.0408075684328204 0.0 8 1.072866979514678E-4 0.0 0.0 2.7449301670883033 0.0 9 1.6093004692720167E-4 0.0 0.0 3.0400758731527913 0.0 10 1.6093004692720167E-4 0.0 0.0 3.4712074688707646 0.0 11 1.6093004692720167E-4 0.0 0.0 3.996214925296272 0.0 12 1.6093004692720167E-4 0.0 0.0 4.366085816483958 0.0 13 1.6093004692720167E-4 0.0 0.0 4.5358133726431795 0.0 14 1.6093004692720167E-4 0.0 0.0 4.613864445402872 0.0 15 1.6093004692720167E-4 0.0 0.0 4.709188676532752 0.0 16 1.6093004692720167E-4 0.0 0.0 4.910887668681511 0.0 17 1.6093004692720167E-4 0.0 0.0 5.14879592138889 0.0 18 1.6093004692720167E-4 0.0 0.0 5.427794979411683 0.0 19 1.6093004692720167E-4 0.0 0.0 5.586847509124734 0.0 20 1.6093004692720167E-4 0.0 0.0 5.748635849635547 0.0 21 1.6093004692720167E-4 0.0 0.0 5.9706120276971335 0.0 22 1.6093004692720167E-4 0.0 0.0 6.2091103572432464 0.0 23 1.6093004692720167E-4 0.0 0.0 6.481403996644072 0.0 24 1.6093004692720167E-4 0.0 0.0 6.670282228387631 0.0 25 1.6093004692720167E-4 0.0 0.0 6.846232413028038 0.0 26 1.6093004692720167E-4 0.0 0.0 7.005016725996211 0.0 27 1.6093004692720167E-4 0.0 0.0 7.175066142249287 0.0 28 1.6093004692720167E-4 0.0 0.0 7.351177256936621 0.0 29 1.6093004692720167E-4 0.0 0.0 7.553305395877187 0.0 30 1.6093004692720167E-4 0.0 0.0 7.767717861733195 0.0 31 1.6093004692720167E-4 0.0 0.0 7.978643509905781 0.0 32 1.6093004692720167E-4 0.0 0.0 8.17116948937969 0.0 33 1.6093004692720167E-4 0.0 0.0 8.358009273862171 0.0 34 1.6093004692720167E-4 0.0 0.0 8.541952317499963 0.0 35 1.6093004692720167E-4 0.0 0.0 8.761729118253545 0.0 36 1.6093004692720167E-4 0.0 0.0 8.956132614941604 0.0 37 1.6093004692720167E-4 0.0 0.0 9.17446104527284 0.0 38 1.6093004692720167E-4 0.0 0.0 9.384635686559767 0.0 39 1.6093004692720167E-4 0.0 0.0 9.621578358985582 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTGCCC 20 7.034416E-4 45.000004 25 CACGATT 30 2.1662308E-6 45.000004 38 CGCGAAA 20 7.034416E-4 45.000004 28 CTACGGT 20 7.034416E-4 45.000004 11 TCTAACG 20 7.034416E-4 45.000004 17 TTGCGTC 20 7.034416E-4 45.000004 16 TACTCGA 40 6.8193913E-9 45.000004 30 TTACGCA 20 7.034416E-4 45.000004 25 CCGCGAA 20 7.034416E-4 45.000004 27 GACGATA 20 7.034416E-4 45.000004 9 GCTCGAT 20 7.034416E-4 45.000004 28 AATCGAC 20 7.034416E-4 45.000004 27 AGTCGAC 30 2.1662308E-6 45.000004 18 AGCGTAA 50 2.1827873E-11 45.0 21 TCCGATC 25 3.8917424E-5 45.0 21 AAGCGTA 50 2.1827873E-11 45.0 20 TCGATTG 25 3.8917424E-5 45.0 1 CCGCTCG 85 0.0 45.0 19 TGCGCGT 35 1.2124656E-7 45.0 37 CGTAGAC 25 3.8917424E-5 45.0 33 >>END_MODULE