##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547344_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 4449055 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.326123637491555 31.0 31.0 33.0 30.0 34.0 2 31.73666879820546 31.0 31.0 34.0 30.0 34.0 3 31.72573928620797 31.0 31.0 34.0 30.0 34.0 4 35.573741614792354 37.0 35.0 37.0 33.0 37.0 5 35.490439655162724 37.0 35.0 37.0 33.0 37.0 6 35.538724515655574 37.0 35.0 37.0 33.0 37.0 7 35.9393415006108 37.0 35.0 37.0 35.0 37.0 8 35.929390173868384 37.0 35.0 37.0 35.0 37.0 9 37.63248420170126 39.0 37.0 39.0 35.0 39.0 10 37.00508647341964 39.0 37.0 39.0 32.0 39.0 11 36.74691816576779 39.0 37.0 39.0 32.0 39.0 12 36.56823617599692 39.0 35.0 39.0 32.0 39.0 13 36.49572077665931 39.0 35.0 39.0 32.0 39.0 14 37.619013251128614 40.0 36.0 41.0 32.0 41.0 15 37.7116929325441 40.0 36.0 41.0 32.0 41.0 16 37.730949606152315 40.0 36.0 41.0 32.0 41.0 17 37.63648392748573 40.0 36.0 41.0 32.0 41.0 18 37.4272060021735 39.0 36.0 41.0 32.0 41.0 19 37.282758023894964 39.0 36.0 41.0 32.0 41.0 20 37.028981210616635 39.0 35.0 41.0 32.0 41.0 21 36.91751866407586 39.0 35.0 41.0 31.0 41.0 22 36.85983045837824 38.0 35.0 41.0 31.0 41.0 23 36.7616687139179 38.0 35.0 40.0 31.0 41.0 24 36.62799246132044 38.0 35.0 40.0 31.0 41.0 25 36.54412229113823 38.0 35.0 40.0 31.0 41.0 26 36.423829554815576 38.0 35.0 40.0 30.0 41.0 27 36.34836431556814 38.0 35.0 40.0 30.0 41.0 28 36.371014743580375 38.0 35.0 40.0 30.0 41.0 29 36.34516700737572 38.0 35.0 40.0 30.0 41.0 30 36.24216648254517 38.0 35.0 40.0 30.0 41.0 31 36.08266924099612 38.0 35.0 40.0 30.0 41.0 32 35.85742792570557 38.0 35.0 40.0 29.0 41.0 33 35.50370674221829 38.0 35.0 40.0 26.0 41.0 34 35.11055583713845 38.0 34.0 40.0 24.0 41.0 35 34.84484008401784 38.0 34.0 40.0 23.0 41.0 36 34.67500087097147 38.0 34.0 40.0 22.0 41.0 37 34.57757276545244 38.0 34.0 40.0 22.0 41.0 38 34.47010477505897 38.0 33.0 40.0 21.0 41.0 39 34.415506439007835 38.0 33.0 40.0 21.0 41.0 40 34.27416743555654 38.0 33.0 40.0 20.0 41.0 41 34.15973369625684 38.0 33.0 40.0 19.0 41.0 42 34.075860379338984 38.0 33.0 40.0 18.0 41.0 43 34.03989139266653 38.0 33.0 40.0 18.0 41.0 44 33.904501517738034 38.0 33.0 40.0 18.0 41.0 45 33.8246110690922 37.0 33.0 40.0 18.0 41.0 46 33.7663843220639 37.0 33.0 40.0 19.0 41.0 47 33.64124763573388 37.0 33.0 40.0 18.0 41.0 48 33.578454076202696 37.0 33.0 40.0 18.0 41.0 49 33.46986404978136 37.0 32.0 40.0 18.0 41.0 50 33.41085736184426 37.0 32.0 40.0 18.0 41.0 51 32.99093874991431 36.0 31.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 0.0 10 1.0 11 11.0 12 16.0 13 20.0 14 53.0 15 193.0 16 471.0 17 1126.0 18 2467.0 19 4698.0 20 8239.0 21 12993.0 22 19689.0 23 29350.0 24 43415.0 25 66244.0 26 96037.0 27 115005.0 28 116051.0 29 115519.0 30 122604.0 31 139902.0 32 165864.0 33 203741.0 34 285971.0 35 362164.0 36 366392.0 37 448167.0 38 657990.0 39 1064343.0 40 317.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.032377662222654 22.23926204553551 27.2984262950222 20.429933997219635 2 36.15911693606845 23.649539059418238 27.865153386505675 12.326190618007644 3 26.488906071064527 24.30172250062092 36.79050944526422 12.418861983050334 4 24.43635783329269 25.577454088564878 36.46922773487853 13.516960343263907 5 21.41423291013485 29.767377566696744 35.019189468325294 13.799200054843109 6 20.13276976796196 38.27592601125407 31.870273574950186 9.721030645833778 7 83.14790444262883 2.854358959374519 12.570871791874904 1.4268648061217495 8 83.94054467746521 2.294801929848024 12.343542617477194 1.4211107752095669 9 78.95274389729954 5.340077836754097 13.496641421605263 2.2105368443411018 10 32.80721411625615 38.62301095401158 19.16941912383641 9.40035580589586 11 24.343281887951488 23.769969128275555 34.21922183474918 17.667527149023783 12 24.87818199595195 21.80186578947664 35.37526508438309 17.94468713018832 13 22.95525679048697 22.596259205606582 35.70809980995964 18.740384193946806 14 18.486240336430996 26.291313548607516 35.843386966445685 19.379059148515807 15 18.48459953855369 27.112386787756055 37.130581662847504 17.272432010842753 16 22.890411559308664 26.213162120944784 35.025820089884256 15.870606229862297 17 22.355488974624947 25.417487533869554 33.38969736269837 18.837326128807128 18 21.601845785228548 26.63484717541141 34.73800616085888 17.025300878501167 19 22.865574824316624 27.244572161953496 32.70773231618849 17.18212069754139 20 23.730185398921794 27.393952198837727 32.447766997710744 16.428095404529728 21 24.37805331694034 24.924011953100152 34.887678394625375 15.810256335334133 22 23.117178816625103 22.270189961688494 35.96885181235116 18.64377940933524 23 20.677155036294224 25.181707126569574 35.47436478083548 18.66677305630072 24 20.074937261957874 25.878956317689937 36.10791505162332 17.938191368728866 25 20.999380767376444 27.12106278749083 33.3575332289666 18.52202321616613 26 20.147064938509413 28.80195906771213 32.20362526424151 18.847350729536945 27 19.050764712955896 27.611009528989864 35.02211143714789 18.316114320906348 28 18.252842457555595 27.333939454558326 35.89186917221747 18.521348915668607 29 19.410908608682067 26.551413727184762 35.154161951245825 18.883515712887345 30 20.469335622958134 25.400764881531025 35.20527392895795 18.924625566552898 31 21.929668210440195 26.01916586780788 33.172482695763485 18.87868322598844 32 21.835940441284723 26.626036315577128 32.875857906903825 18.662165336234324 33 21.415019594048623 26.2183542347757 32.954638681697574 19.411987489478104 34 20.107348639205405 27.18183973900075 33.10496273927834 19.6058488825155 35 19.840168305404184 28.03166065602695 32.15383941084118 19.974331627727686 36 21.81670040042211 28.255595851253805 31.150862374144623 18.776841374179458 37 20.856878595566926 29.273969415977103 30.531607273904232 19.33754471455174 38 20.634606674900624 29.52813575017616 30.332104233370906 19.505153341552305 39 20.593856448167084 28.533947096630634 30.15094216637016 20.72125428883212 40 21.495148969837416 27.714042645011133 31.130138872187462 19.660669512963988 41 19.770175913761463 27.800173295227864 31.552318413685605 20.87733237732507 42 20.444184214400586 28.517876268106374 30.243950681661612 20.793988835831428 43 20.47495479377081 28.02302960965868 30.47251607363811 21.029499522932397 44 20.505140979376517 28.522349128073266 30.495981730951854 20.476528161598363 45 20.725187708401 28.1497531498262 30.02230810812633 21.10275103364647 46 20.66247776213151 28.358786304057826 30.48350717174771 20.495228762062958 47 20.66973773082149 28.266294752481148 30.887615459912272 20.176352056785092 48 20.091075520531888 28.582856359384184 31.312110099785233 20.01395802029869 49 20.64433907874818 27.93599989211192 31.274394225290543 20.145266803849356 50 19.783864213861147 27.98335826372117 31.863620476707975 20.369157045709706 51 19.552736479994064 28.366967816761086 31.6532387214813 20.427056981763542 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 4406.0 1 5815.0 2 7224.0 3 74469.0 4 141714.0 5 95638.5 6 49563.0 7 48799.5 8 48036.0 9 48866.5 10 49697.0 11 49427.5 12 49158.0 13 47377.5 14 45597.0 15 42314.0 16 39031.0 17 36987.0 18 34943.0 19 32987.5 20 31032.0 21 31115.0 22 31198.0 23 33902.5 24 36607.0 25 40646.0 26 50955.5 27 57226.0 28 64512.5 29 71799.0 30 85823.0 31 99847.0 32 113414.5 33 126982.0 34 141614.0 35 156246.0 36 167610.0 37 178974.0 38 191355.5 39 203737.0 40 221484.5 41 239232.0 42 254159.0 43 269086.0 44 275329.0 45 281572.0 46 295055.0 47 308538.0 48 310102.0 49 311666.0 50 299111.5 51 286557.0 52 269305.5 53 252054.0 54 236411.5 55 220769.0 56 207619.5 57 194470.0 58 179978.5 59 165487.0 60 150178.5 61 134870.0 62 117049.5 63 99229.0 64 83866.5 65 68504.0 66 55805.5 67 43107.0 68 34990.0 69 26873.0 70 21833.0 71 16793.0 72 13512.5 73 10232.0 74 8614.0 75 4920.0 76 2844.0 77 2103.0 78 1362.0 79 995.5 80 629.0 81 461.0 82 293.0 83 190.0 84 87.0 85 63.5 86 40.0 87 34.0 88 28.0 89 21.5 90 15.0 91 11.5 92 8.0 93 8.0 94 8.0 95 5.0 96 2.0 97 2.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 4449055.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.8660221911002 #Duplication Level Percentage of deduplicated Percentage of total 1 81.29341006752709 17.77563508526756 2 6.105010287074763 2.6698458082814356 3 2.120477307187081 1.3909921156403133 4 1.1999273666303318 1.0495055370578905 5 0.8378919617208017 0.9160682114365767 6 0.6510098247093248 0.8540997164231009 7 0.5048315483541582 0.7727060487355649 8 0.3991344693475794 0.6981986531189741 9 0.32530316390084113 0.6401777580621808 >10 4.179912550810963 22.410356186778785 >50 1.6366234352197757 25.590586811315237 >100 0.7406244114141316 21.788025357101994 >500 0.003860954032440979 0.6318087660615264 >1k 0.0018783019617226646 0.7272303716819265 >5k 0.0 0.0 >10k+ 1.0435010898459248E-4 2.0847635730369687 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 91368 2.0536495952511262 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.4953366501425584E-5 0.0 0.0 0.020656071907405055 0.0 2 4.4953366501425584E-5 0.0 0.0 0.06783463005065121 0.0 3 4.4953366501425584E-5 0.0 0.0 0.10930411064821631 0.0 4 4.4953366501425584E-5 0.0 0.0 0.17682406713335752 0.0 5 4.4953366501425584E-5 0.0 0.0 0.3398699274340281 0.0 6 4.4953366501425584E-5 0.0 0.0 0.643057907802893 0.0 7 4.4953366501425584E-5 0.0 0.0 0.8446288031952853 0.0 8 4.4953366501425584E-5 0.0 0.0 1.1263965044262207 0.0 9 4.4953366501425584E-5 0.0 0.0 1.290566198889427 0.0 10 4.4953366501425584E-5 0.0 0.0 1.4863381100031354 0.0 11 4.4953366501425584E-5 0.0 0.0 1.6673203635378748 0.0 12 6.743004975213837E-5 0.0 0.0 1.800899292096861 0.0 13 6.743004975213837E-5 0.0 0.0 1.8758140773714866 0.0 14 6.743004975213837E-5 0.0 0.0 1.926588904834847 0.0 15 6.743004975213837E-5 0.0 0.0 1.9669345512698764 0.0 16 2.2476683250712793E-4 0.0 0.0 2.0282059898113194 0.0 17 2.2476683250712793E-4 0.0 0.0 2.103188205135697 0.0 18 2.2476683250712793E-4 0.0 0.0 2.197972378403953 0.0 19 2.2476683250712793E-4 0.0 0.0 2.263267143247274 0.0 20 2.2476683250712793E-4 0.0 0.0 2.335799400097324 0.0 21 2.2476683250712793E-4 0.0 0.0 2.4193227550569727 0.0 22 2.2476683250712793E-4 0.0 0.0 2.517208710613827 0.0 23 2.2476683250712793E-4 0.0 0.0 2.6260857642802797 0.0 24 2.2476683250712793E-4 0.0 0.0 2.7140595025235696 0.0 25 2.472435157578407E-4 0.0 0.0 2.7964590233206827 0.0 26 2.472435157578407E-4 0.0 0.0 2.875959051978454 0.0 27 2.472435157578407E-4 0.0 0.0 2.962651619276453 0.0 28 2.472435157578407E-4 0.0 0.0 3.0547385905546234 0.0 29 2.472435157578407E-4 0.0 0.0 3.165121581998874 0.0 30 2.472435157578407E-4 0.0 0.0 3.2906089045876032 0.0 31 2.472435157578407E-4 0.0 0.0 3.3984295541412726 0.0 32 2.472435157578407E-4 0.0 0.0 3.5069020275092124 0.0 33 2.472435157578407E-4 0.0 0.0 3.617374925686466 0.0 34 2.472435157578407E-4 0.0 0.0 3.733826621608409 0.0 35 2.472435157578407E-4 0.0 0.0 3.8612019855901982 2.2476683250712792E-5 36 2.697201990085535E-4 0.0 0.0 3.9814522409815116 2.2476683250712792E-5 37 2.697201990085535E-4 0.0 0.0 4.1057033459914525 2.2476683250712792E-5 38 2.697201990085535E-4 0.0 0.0 4.258477362046547 2.2476683250712792E-5 39 2.697201990085535E-4 0.0 0.0 4.485739106394504 2.2476683250712792E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 44325 0.0 43.5533 1 CGGTCTA 580 0.0 40.732758 31 ATTCGCG 80 0.0 39.375 1 CACGACG 620 0.0 38.830647 26 TACGGGA 1880 0.0 38.776596 4 TAGGGAT 8370 0.0 38.360214 5 ACGGGAT 2635 0.0 38.16888 5 ACGGTCT 615 0.0 38.04878 30 GTAGGGA 7445 0.0 38.018803 4 GTTTTTT 51995 0.0 37.903164 2 TAGGGAC 5805 0.0 37.82946 5 ATAGGGA 6905 0.0 37.603184 4 TAAGGGA 6745 0.0 37.327652 4 AGGGATC 5855 0.0 37.314262 6 CGTTAGG 665 0.0 37.21805 2 CGACGGT 640 0.0 36.914062 28 AGGGCGA 2685 0.0 36.78771 6 TCACGAC 660 0.0 36.477272 25 TTAGGGA 7085 0.0 36.42555 4 GGGCGAT 5050 0.0 36.40099 7 >>END_MODULE