SRR1547343_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547343_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	710881
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10260	1.4432795362374293	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1110	0.1561442773122365	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACGCGAG	25	3.889299E-5	45.0	1
TCTGCGA	20	7.031469E-4	45.0	35
GCCCCCG	25	3.889299E-5	45.0	31
CGGGTCA	45	3.8380676E-10	45.0	6
TTGTGCG	25	3.889299E-5	45.0	1
TGGAACG	20	7.031469E-4	45.0	1
TGAGTCG	20	7.031469E-4	45.0	1
GTTACGC	20	7.031469E-4	45.0	13
TCGTCTA	20	7.031469E-4	45.0	20
ACTCGTC	20	7.031469E-4	45.0	18
ACTCGCG	25	3.889299E-5	45.0	1
CGAGACT	40	6.8084773E-9	45.0	16
ACCGTAA	20	7.031469E-4	45.0	40
CCGCGGA	20	7.031469E-4	45.0	14
TTGCACG	35	1.2110468E-7	45.0	1
GTAAGCG	25	3.889299E-5	45.0	1
GATTCGC	20	7.031469E-4	45.0	11
AATACGG	20	7.031469E-4	45.0	2
CACCCGC	20	7.031469E-4	45.0	18
GCGTAAG	20	7.031469E-4	45.0	1