##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547340_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2370573 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.39200944244282 31.0 31.0 33.0 30.0 34.0 2 31.818320296400913 31.0 31.0 34.0 30.0 34.0 3 31.887496820388993 31.0 31.0 34.0 30.0 34.0 4 35.68040427356593 37.0 35.0 37.0 33.0 37.0 5 35.576181792334594 37.0 35.0 37.0 33.0 37.0 6 35.61770972672008 37.0 35.0 37.0 33.0 37.0 7 35.97833055552392 37.0 35.0 37.0 35.0 37.0 8 35.97015573871802 37.0 35.0 37.0 35.0 37.0 9 37.70160674233613 39.0 37.0 39.0 35.0 39.0 10 37.051272413884746 39.0 37.0 39.0 33.0 39.0 11 36.80844167211894 39.0 37.0 39.0 32.0 39.0 12 36.43775956277238 39.0 35.0 39.0 32.0 39.0 13 36.250002847412844 39.0 35.0 39.0 32.0 39.0 14 37.28271139509309 39.0 36.0 41.0 32.0 41.0 15 37.45283608646517 39.0 36.0 41.0 32.0 41.0 16 37.53112222234877 39.0 35.0 41.0 32.0 41.0 17 37.478809131800624 39.0 35.0 41.0 32.0 41.0 18 37.32130797068894 39.0 36.0 41.0 32.0 41.0 19 37.236934698910346 39.0 35.0 41.0 32.0 41.0 20 37.05692885222265 39.0 35.0 41.0 32.0 41.0 21 36.9569361500363 39.0 35.0 41.0 31.0 41.0 22 36.907821442326394 39.0 35.0 41.0 31.0 41.0 23 36.832321552637275 38.0 35.0 40.0 31.0 41.0 24 36.69869099158726 38.0 35.0 40.0 31.0 41.0 25 36.6182939736511 38.0 35.0 40.0 31.0 41.0 26 36.51564495166358 38.0 35.0 40.0 31.0 41.0 27 36.42187310831601 38.0 35.0 40.0 31.0 41.0 28 36.495229212515284 38.0 35.0 40.0 31.0 41.0 29 36.49966822367419 38.0 35.0 40.0 31.0 41.0 30 36.43169436250223 38.0 35.0 40.0 30.0 41.0 31 36.29052469592795 38.0 35.0 40.0 30.0 41.0 32 36.13995013020059 38.0 35.0 40.0 30.0 41.0 33 35.91453121249588 38.0 35.0 40.0 29.0 41.0 34 35.6568610205212 38.0 35.0 40.0 27.0 41.0 35 35.46826822038385 38.0 34.0 40.0 27.0 41.0 36 35.31047303753143 38.0 34.0 40.0 26.0 41.0 37 35.22180249247756 38.0 34.0 40.0 25.0 41.0 38 35.12330352197549 38.0 34.0 40.0 25.0 41.0 39 35.0755876321885 38.0 34.0 40.0 25.0 41.0 40 34.933601707266554 38.0 34.0 40.0 24.0 41.0 41 34.837027587844794 38.0 34.0 40.0 24.0 41.0 42 34.76445441671697 38.0 34.0 40.0 23.0 41.0 43 34.73759255673628 38.0 34.0 40.0 23.0 41.0 44 34.61917688255118 38.0 34.0 40.0 23.0 41.0 45 34.527769024619786 37.0 33.0 40.0 23.0 41.0 46 34.47450721829701 37.0 33.0 40.0 23.0 41.0 47 34.341947706314045 37.0 33.0 40.0 23.0 41.0 48 34.27677401202157 37.0 33.0 40.0 23.0 41.0 49 34.17813203811905 37.0 33.0 40.0 23.0 41.0 50 34.10504295796839 37.0 33.0 40.0 23.0 41.0 51 33.68338794038404 36.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 6.0 11 5.0 12 13.0 13 13.0 14 31.0 15 79.0 16 232.0 17 528.0 18 1084.0 19 2027.0 20 3619.0 21 5655.0 22 8598.0 23 13115.0 24 19235.0 25 28802.0 26 39155.0 27 45859.0 28 48209.0 29 51798.0 30 59690.0 31 71652.0 32 89486.0 33 115013.0 34 177639.0 35 229180.0 36 192008.0 37 239998.0 38 355443.0 39 572228.0 40 172.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.312176423168577 23.145922947743014 29.507971279517655 16.03392934957076 2 33.13582834192408 24.889552019701565 29.25208377890071 12.722535859473638 3 27.557008368862718 24.86424168333985 34.28027738441297 13.298472563384465 4 25.420605060464286 27.36068452648368 33.239811640476795 13.978898772575238 5 22.220998889298073 31.00220917052544 32.85876452655118 13.918027413625314 6 21.44333880458438 39.62691720524953 29.115492330335325 9.814251659830767 7 86.47483119060244 3.3883369126367335 8.637616306268567 1.4992155904922566 8 87.18786554980589 2.8874875399323288 8.431294881026655 1.4933520292351259 9 82.39299106165473 5.2958082286434545 9.708412269944862 2.60278843975697 10 37.84768492680883 32.16779234387636 18.185350124210476 11.799172605104335 11 31.553552664271468 23.61496566441953 26.772894148376785 18.05858752293222 12 29.746774303090433 21.694628260762272 30.629936306538546 17.92866112960875 13 24.564904771968635 25.891377316792187 30.83878876541663 18.70492914582255 14 19.613443669526312 28.881962293504564 31.66749136179312 19.837102675176002 15 19.317312734094248 26.630270402978525 36.369856570542225 17.682560292385006 16 22.953311288030363 25.028801053584935 34.81875479050846 17.199132867876248 17 22.969720822771542 25.178975715997776 29.719734427077338 22.131569034153344 18 23.297995885382985 26.818748041085428 31.722710078955597 18.160545994575994 19 25.360324276029466 28.15686334063536 28.097637153548956 18.385175229786217 20 25.638400504856847 27.0820177231412 29.577532520618433 17.702049251383524 21 24.499899391412963 27.078853931095985 31.13044820809146 17.290798469399594 22 23.396410909936122 23.209156604753364 31.988890449692963 21.40554203561755 23 21.054023647447263 26.498572286109727 32.412121457554775 20.03528260888823 24 20.94206759294061 26.69008716458004 33.71741768762236 18.65042755485699 25 21.928327033168774 27.36325774401379 30.9558912549835 19.752523967833937 26 20.20756163172364 29.31493778086564 28.95911663551386 21.518383951896862 27 19.494569456414123 28.97253111378557 32.45143684670331 19.081462583096997 28 18.247993206705722 28.040393609477537 33.72269067436439 19.988922509452355 29 19.557381274485113 27.297746156730884 33.177632580814844 19.967239987969155 30 21.177833376149984 27.37873923308837 32.59528392502572 18.848143465735923 31 23.890046836777437 26.619555693918727 30.566449546164577 18.92394792313926 32 24.3572756460147 26.807442757510525 29.773687627421726 19.06159396905305 33 23.900381890791806 26.656382233325022 29.335945360045862 20.10729051583731 34 20.55148691898541 27.631294206084352 31.023849508114704 20.793369366815533 35 20.69284514756559 28.354115228681 30.238807241962174 20.714232381791238 36 24.291553139262113 28.250385033491902 28.33947741748514 19.118584409760846 37 21.16568441469636 29.60292722476802 29.649709163143257 19.58167919739236 38 22.176832352346878 30.018944786766745 27.66854258443001 20.135680276456366 39 21.03402848172151 28.643285821613595 28.549721944863123 21.77296375180178 40 23.081761245066065 27.46703012309682 28.269367785763187 21.181840846073925 41 20.09898028873188 26.383072784512436 30.126513716304032 23.391433210451652 42 20.701155374671018 27.69840878133683 28.749547050438863 22.85088879355329 43 20.64256194599365 27.526931252486214 29.254783548112627 22.57572325340751 44 20.58848219396745 27.834494023174987 29.424784640675483 22.152239142182083 45 20.31483527400337 29.51510035759287 27.967668576331544 22.202395792072213 46 21.590223123270196 29.232383900432513 27.8385858608868 21.338807115410493 47 20.64509297962982 28.088525432458734 30.207970815494818 21.05841077241663 48 21.054361118598752 27.6610760352033 30.726917078697852 20.557645767500095 49 21.324802062623675 27.283192713322897 30.390669260132462 21.00133596392096 50 20.612358277935336 28.397775558904957 29.90867608801754 21.08119007514217 51 19.132758198123405 29.70281868560892 28.990585820390258 22.173837295877412 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2973.0 1 3709.5 2 4446.0 3 22975.0 4 41504.0 5 28307.0 6 15110.0 7 15063.5 8 15017.0 9 16040.0 10 17063.0 11 17462.5 12 17862.0 13 17487.0 14 17112.0 15 16008.0 16 14904.0 17 14025.0 18 13146.0 19 13026.5 20 12907.0 21 13242.5 22 13578.0 23 14639.5 24 15701.0 25 18228.5 26 21705.5 27 22655.0 28 27737.5 29 32820.0 30 40806.0 31 48792.0 32 53547.0 33 58302.0 34 68174.0 35 78046.0 36 85068.0 37 92090.0 38 99235.5 39 106381.0 40 121028.0 41 135675.0 42 145571.0 43 155467.0 44 161101.5 45 166736.0 46 174808.0 47 182880.0 48 184127.0 49 185374.0 50 176600.5 51 167827.0 52 159989.0 53 152151.0 54 136512.5 55 120874.0 56 115618.5 57 110363.0 58 104645.5 59 98928.0 60 87991.0 61 77054.0 62 65621.5 63 54189.0 64 46873.0 65 39557.0 66 31464.0 67 23371.0 68 19355.0 69 15339.0 70 12594.0 71 9849.0 72 7810.0 73 5771.0 74 4880.0 75 2963.0 76 1937.0 77 1464.5 78 992.0 79 787.0 80 582.0 81 407.0 82 232.0 83 182.5 84 133.0 85 102.0 86 71.0 87 47.0 88 23.0 89 22.0 90 21.0 91 18.0 92 15.0 93 10.5 94 6.0 95 4.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2370573.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.208189268259215 #Duplication Level Percentage of deduplicated Percentage of total 1 80.79626180968008 17.135424126275186 2 7.163834773988379 3.0386392754656497 3 2.4348110175607545 1.5491379867861386 4 1.3051128220779868 1.1071631898824743 5 0.8713919547181577 0.9240322751250526 6 0.6155515393797563 0.7832840130920511 7 0.4871351589655157 0.7231878255394937 8 0.3768501011176108 0.639384661621193 9 0.3217828395933172 0.6141988228835671 >10 3.3108191766640838 16.398993657550303 >50 1.1968323661417166 18.44169895579775 >100 1.112601300483511 36.21602642902236 >500 0.005211246581661705 0.6866336115864632 >1k 0.0016034604866651402 0.6209585710428438 >5k 0.0 0.0 >10k+ 2.0043256083314252E-4 1.1212365983294832 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 26377 1.112684570354931 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.21838939361918E-5 0.0 0.0 0.0241713712254379 0.0 2 4.21838939361918E-5 0.0 0.0 0.09335295728079245 0.0 3 4.21838939361918E-5 0.0 0.0 0.1387428271561348 0.0 4 4.21838939361918E-5 0.0 0.0 0.21682521483202585 0.0 5 4.21838939361918E-5 0.0 0.0 0.40758078321148516 0.0 6 4.21838939361918E-5 0.0 0.0 0.6446120832389469 0.0 7 4.21838939361918E-5 0.0 0.0 0.7779553719712492 0.0 8 4.21838939361918E-5 0.0 0.0 1.0153663270441367 0.0 9 4.21838939361918E-5 0.0 0.0 1.12166973976334 0.0 10 4.21838939361918E-5 0.0 0.0 1.3199340412634413 0.0 11 4.21838939361918E-5 0.0 0.0 1.573248324350273 0.0 12 4.21838939361918E-5 0.0 0.0 1.7711329708049488 0.0 13 4.21838939361918E-5 0.0 0.0 1.8566397238136096 0.0 14 4.21838939361918E-5 0.0 0.0 1.9006375251890577 0.0 15 4.21838939361918E-5 0.0 0.0 1.9548860127910004 0.0 16 4.21838939361918E-5 0.0 0.0 2.0679388485399945 0.0 17 4.21838939361918E-5 0.0 0.0 2.1992994942572954 0.0 18 4.21838939361918E-5 0.0 0.0 2.366094610880998 0.0 19 4.21838939361918E-5 0.0 0.0 2.4672094046460495 0.0 20 4.21838939361918E-5 0.0 0.0 2.5803887920768522 0.0 21 4.21838939361918E-5 0.0 0.0 2.733178855913739 0.0 22 4.21838939361918E-5 0.0 0.0 2.900733282628293 0.0 23 4.21838939361918E-5 0.0 0.0 3.081575635932747 0.0 24 4.21838939361918E-5 0.0 0.0 3.2128097299682397 0.0 25 4.21838939361918E-5 0.0 0.0 3.335564861322558 0.0 26 4.21838939361918E-5 0.0 0.0 3.4553249362074063 0.0 27 4.21838939361918E-5 0.0 0.0 3.585462249000558 0.0 28 4.21838939361918E-5 0.0 0.0 3.721547490838713 0.0 29 4.21838939361918E-5 0.0 0.0 3.878176289023793 0.0 30 4.21838939361918E-5 0.0 0.0 4.037378304738981 0.0 31 8.43677878723836E-5 0.0 0.0 4.184304807318737 0.0 32 8.43677878723836E-5 0.0 0.0 4.322921082793063 0.0 33 8.43677878723836E-5 0.0 0.0 4.498448265461557 0.0 34 8.43677878723836E-5 0.0 0.0 4.655245799222382 0.0 35 8.43677878723836E-5 0.0 0.0 4.836172520314709 0.0 36 8.43677878723836E-5 0.0 0.0 4.991029594954469 0.0 37 8.43677878723836E-5 0.0 0.0 5.160355745214343 0.0 38 8.43677878723836E-5 0.0 0.0 5.358451311138699 0.0 39 8.43677878723836E-5 0.0 0.0 5.696428669355468 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATGCGTA 25 3.892064E-5 45.000004 44 GCGTAAG 70 0.0 45.0 1 CGGTCGA 30 2.1664837E-6 44.999996 19 CGATCAT 30 2.1664837E-6 44.999996 10 CGACGGT 595 0.0 44.2437 28 TAGACGG 260 0.0 43.26923 2 CGTTTTT 13630 0.0 43.15114 1 CGGTCTA 605 0.0 43.140495 31 ATGTCGC 65 0.0 41.53846 33 ATCGATC 65 0.0 41.53846 41 GGCGATA 560 0.0 40.98214 8 TTGCGTC 90 0.0 40.000004 16 TAGGGAC 2990 0.0 39.657192 5 ACGTAGG 290 0.0 39.568966 2 CGTTAGG 325 0.0 39.46154 2 TACGGGT 240 0.0 39.374996 4 ACGGGTA 235 0.0 39.255318 5 ATAGGGA 3400 0.0 39.176468 4 TATAGCG 150 0.0 39.0 1 GACGGTC 680 0.0 38.713238 29 >>END_MODULE