##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547336_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1192579 Sequences flagged as poor quality 0 Sequence length 51 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.254258208470887 31.0 31.0 33.0 30.0 34.0 2 31.648508819960774 31.0 31.0 34.0 30.0 34.0 3 31.59003554481506 31.0 31.0 34.0 30.0 34.0 4 35.4574673879047 37.0 35.0 37.0 33.0 37.0 5 35.381328197125725 37.0 35.0 37.0 33.0 37.0 6 35.43663438648509 37.0 35.0 37.0 33.0 37.0 7 35.89697537857031 37.0 35.0 37.0 35.0 37.0 8 35.89599515000683 37.0 35.0 37.0 35.0 37.0 9 37.62580340589596 39.0 37.0 39.0 35.0 39.0 10 36.8590248528609 39.0 37.0 39.0 32.0 39.0 11 36.567280658136696 39.0 35.0 39.0 32.0 39.0 12 36.111098719665534 38.0 35.0 39.0 32.0 39.0 13 35.879774002393134 38.0 35.0 39.0 31.0 39.0 14 36.97945041795973 39.0 35.0 41.0 31.0 41.0 15 37.1654573826975 39.0 35.0 41.0 32.0 41.0 16 37.24809257919182 39.0 35.0 41.0 32.0 41.0 17 37.16674367064991 39.0 35.0 41.0 32.0 41.0 18 36.961015580519195 39.0 35.0 40.0 32.0 41.0 19 36.79982709740822 38.0 35.0 40.0 31.0 41.0 20 36.52927646721936 38.0 35.0 40.0 31.0 41.0 21 36.381725655071904 38.0 35.0 40.0 31.0 41.0 22 36.30116327723363 38.0 35.0 40.0 31.0 41.0 23 36.2296921210251 37.0 35.0 40.0 31.0 41.0 24 36.06200511664217 37.0 35.0 40.0 31.0 41.0 25 35.9694653352105 37.0 35.0 40.0 30.0 41.0 26 35.796301964062756 37.0 35.0 40.0 30.0 41.0 27 35.69081628973846 37.0 34.0 40.0 30.0 41.0 28 35.687572060215714 37.0 34.0 40.0 30.0 41.0 29 35.65680680273592 37.0 34.0 40.0 30.0 41.0 30 35.52783673031304 36.0 34.0 40.0 29.0 41.0 31 35.31716976401563 36.0 34.0 40.0 29.0 41.0 32 35.045373933299174 36.0 34.0 40.0 27.0 41.0 33 34.66564898426016 36.0 34.0 40.0 24.0 41.0 34 34.277984938523986 36.0 33.0 40.0 23.0 41.0 35 33.98289756904993 36.0 33.0 40.0 21.0 41.0 36 33.77401580943485 36.0 33.0 40.0 20.0 41.0 37 33.63188518328765 36.0 33.0 40.0 18.0 41.0 38 33.56651928299928 36.0 33.0 40.0 18.0 41.0 39 33.55371677683407 36.0 33.0 40.0 18.0 41.0 40 33.405585709625946 36.0 33.0 40.0 18.0 41.0 41 33.35038433512581 36.0 33.0 40.0 18.0 41.0 42 33.26990413213716 35.0 33.0 40.0 18.0 41.0 43 33.20290312004488 35.0 33.0 40.0 18.0 41.0 44 33.04594244909561 35.0 32.0 40.0 17.0 41.0 45 32.96694390895698 35.0 32.0 40.0 17.0 41.0 46 32.88379553891189 35.0 32.0 40.0 17.0 41.0 47 32.7299851833715 35.0 32.0 40.0 15.0 41.0 48 32.67841375707605 35.0 32.0 40.0 15.0 41.0 49 32.57588050770641 35.0 31.0 39.0 15.0 41.0 50 32.472176685988934 35.0 31.0 39.0 15.0 41.0 51 32.058731538958845 35.0 31.0 39.0 13.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 4.0 12 3.0 13 8.0 14 19.0 15 49.0 16 133.0 17 326.0 18 789.0 19 1565.0 20 2696.0 21 4379.0 22 6604.0 23 9980.0 24 14880.0 25 22093.0 26 30344.0 27 32652.0 28 32070.0 29 32583.0 30 35816.0 31 41382.0 32 49861.0 33 62626.0 34 98197.0 35 141027.0 36 104688.0 37 106149.0 38 143397.0 39 218209.0 40 49.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.472411471273603 24.148756602287982 27.22804946255133 20.150782463887086 2 36.17630362433013 24.307152817549195 27.481198310552173 12.035345247568504 3 25.27849308096151 23.995810759706483 38.46680178000786 12.258894379324136 4 22.919068673857247 26.069048675182106 38.13592223240557 12.87596041855508 5 20.13057415902846 29.846408497885673 37.43181793407397 12.591199409011896 6 18.786512256211118 38.21633619240319 33.36533680368344 9.631814747702249 7 80.92503725120098 3.6205567933025815 13.91991641643866 1.53448953905779 8 81.73244707478499 2.951251028233769 13.441457547047197 1.8748443499340506 9 77.93798146705585 4.8093250006917785 14.91230350358341 2.3403900286689603 10 40.535427841677574 23.5657344293334 23.705599377483587 12.193238351505435 11 32.068399661573785 25.45583982277065 27.205157897296534 15.270602618359035 12 29.684322799579732 22.719752737554494 31.84451512226863 15.751409340597142 13 19.92211836700126 31.704566322231067 32.71380763873923 15.659507672028436 14 15.936302752270501 34.79895252222285 33.69931887111881 15.565425854387843 15 15.525344652220104 27.8789078123965 41.80980882608196 14.785938709301439 16 17.682937566400213 25.256272330805757 41.53863182229437 15.522158280499657 17 17.721006323270828 27.723111005644068 31.535353213497807 23.020529457587298 18 18.93308535535172 29.559802746820125 35.4125806340712 16.09453126375695 19 22.8675836150058 31.60193161207769 29.33382191033047 16.19666286258604 20 23.49991069773994 28.54796202180317 31.32513653183563 16.626990748621264 21 20.263814808075608 30.78663971107994 33.079988830928606 15.869556649915856 22 20.762230426663557 27.42761695451622 31.711609880771004 20.09854273804922 23 17.319607338381775 31.311720229854796 31.695510318394 19.67316211336943 24 18.13531849881643 28.292465320955678 37.000232269728045 16.57198391049985 25 17.47817125741775 29.84112582898072 34.58261465278191 18.09808826081962 26 16.101742526071646 33.555345180486995 31.34165535364953 19.00125693979183 27 16.133270835726606 34.30254934893202 32.37529756938534 17.188882245956034 28 15.511089831365469 31.639161850074505 36.04733942153937 16.80240889702066 29 15.732207258387076 29.70578888274907 35.88885935439078 18.67314450447308 30 17.278352209790715 32.52438622514735 33.38571281231684 16.8115487527451 31 21.045649806008658 30.584892070043157 30.603339485266805 17.766118638681377 32 21.235825886586966 30.82437306040103 31.625577844318908 16.314223208693093 33 20.71409944330732 31.531160619128794 29.42362728171467 18.331112655849214 34 17.516994681274785 32.21891379942126 31.086410208464176 19.177681310839784 35 16.785554667657237 31.7764273897159 31.597655165821298 19.840362776805563 36 22.278188698610325 32.086511669247905 27.838239647017094 17.797059985124676 37 17.041470627941628 35.50364378376611 29.851355759241105 17.603529829051155 38 17.746161889484892 35.918039811199094 27.421495766737465 18.914302532578557 39 18.89904148907536 34.028353677198744 28.502346595068335 18.570258238657562 40 20.691291729939902 31.146615863603166 27.481030606777413 20.68106179967952 41 15.620935803833541 30.953337263191788 29.704279548776224 23.721447384198445 42 18.22034431261996 31.720330477058546 27.815599637424437 22.24372557289706 43 17.976083764681416 31.42349479573261 28.197461132553904 22.40296030703207 44 17.365893580215648 33.73629755345348 28.83389695776967 20.063911908561195 45 17.011787059809038 36.326482354628084 26.053284520354623 20.60844606520826 46 19.906689619723306 34.73488968026437 26.740953848759702 18.61746685125262 47 18.07905388238431 32.70190067073125 28.421932635070718 20.797112811813726 48 18.748946610664785 30.91946110069019 30.283360683023936 20.048231605621094 49 19.265306533152103 29.97948144315806 30.15221633116129 20.602995692528545 50 17.330759639403343 32.15619258766086 30.67947699900803 19.833570773927764 51 16.09444741186957 34.244272287202776 27.652591568357316 22.008688732570334 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2628.0 1 2599.5 2 2571.0 3 21106.5 4 39642.0 5 26066.5 6 12491.0 7 13260.5 8 14030.0 9 16431.0 10 18832.0 11 20955.0 12 23078.0 13 22760.0 14 22442.0 15 20702.0 16 18962.0 17 16884.0 18 14806.0 19 13504.5 20 12203.0 21 11741.0 22 11279.0 23 11903.5 24 12528.0 25 12167.5 26 13080.0 27 14353.0 28 16125.5 29 17898.0 30 18435.0 31 18972.0 32 22499.5 33 26027.0 34 31379.5 35 36732.0 36 37656.0 37 38580.0 38 43549.0 39 48518.0 40 58598.0 41 68678.0 42 77374.5 43 86071.0 44 91496.0 45 96921.0 46 99006.0 47 101091.0 48 97319.0 49 93547.0 50 87097.0 51 80647.0 52 70783.0 53 60919.0 54 53792.0 55 46665.0 56 42918.0 57 39171.0 58 36893.0 59 34615.0 60 30624.0 61 26633.0 62 22217.0 63 17801.0 64 14330.0 65 10859.0 66 7904.0 67 4949.0 68 3638.5 69 2328.0 70 1872.0 71 1416.0 72 1062.5 73 709.0 74 622.5 75 411.5 76 287.0 77 206.0 78 125.0 79 121.5 80 118.0 81 85.0 82 52.0 83 38.0 84 24.0 85 19.0 86 14.0 87 13.5 88 13.0 89 9.0 90 5.0 91 3.5 92 2.0 93 1.5 94 1.0 95 2.0 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1192579.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.177981187389125 #Duplication Level Percentage of deduplicated Percentage of total 1 78.98598445987098 23.836375530973967 2 7.783557414098073 4.697840984272296 3 3.1989230767440273 2.8961112128965856 4 1.8556141180505685 2.239947517823349 5 1.2456296282419803 1.8795293743770498 6 0.8873225160183998 1.6066561317330035 7 0.69266269124918 1.463221316600685 8 0.48562292764671955 1.1724095659750027 9 0.40028190325060414 1.0871729771354142 >10 3.3511247075175237 21.56863396508816 >50 0.6438534759167699 13.884540821641306 >100 0.46551587382129894 20.278022160449602 >500 0.0030699488080966767 0.6192045376687496 >1k 5.581725105630322E-4 0.300927341279984 >5k 0.0 0.0 >10k+ 2.790862552815161E-4 2.4694065620848393 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 29320 2.4585373379876723 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2243 0.18807978339380452 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1330 0.11152301021567544 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.07152565993531665 0.0 2 0.0 0.0 0.0 0.2505494394920588 0.0 3 0.0 0.0 0.0 0.36928371202243204 0.0 4 0.0 0.0 0.0 0.5743854285544187 0.0 5 0.0 0.0 0.0 1.0979566133564318 0.0 6 0.0 0.0 0.0 1.7901539436800413 0.0 7 0.0 0.0 0.0 2.2198948665036027 0.0 8 0.0 0.0 0.0 2.9211482006642746 0.0 9 0.0 0.0 0.0 3.211946546098833 0.0 10 0.0 0.0 0.0 3.6587094020605764 0.0 11 0.0 0.0 0.0 4.206094522878568 0.0 12 0.0 0.0 0.0 4.616549511604682 0.0 13 0.0 0.0 0.0 4.796747217584747 0.0 14 0.0 0.0 0.0 4.878251252118308 0.0 15 0.0 0.0 0.0 4.973506996182223 0.0 16 0.0 0.0 0.0 5.189509458073637 0.0 17 0.0 0.0 0.0 5.443245269286144 0.0 18 0.0 0.0 0.0 5.7531618450433895 0.0 19 0.0 0.0 0.0 5.931095550064189 0.0 20 0.0 0.0 0.0 6.12194244574154 0.0 21 0.0 0.0 0.0 6.401672342041911 0.0 22 0.0 0.0 0.0 6.670585344870235 0.0 23 0.0 0.0 0.0 6.985868441419814 0.0 24 0.0 0.0 0.0 7.212268537346373 0.0 25 0.0 0.0 0.0 7.43380522380488 0.0 26 0.0 0.0 0.0 7.635804420503799 0.0 27 0.0 0.0 0.0 7.835623468130833 0.0 28 0.0 0.0 0.0 8.054225338531033 0.0 29 0.0 0.0 0.0 8.284818028826601 0.0 30 0.0 0.0 0.0 8.526479168256358 0.0 31 0.0 0.0 0.0 8.78214357287861 0.0 32 0.0 0.0 0.0 9.013323226385841 0.0 33 0.0 0.0 0.0 9.24332895346975 0.0 34 0.0 0.0 0.0 9.468638974860365 0.0 35 0.0 0.0 0.0 9.72153626719907 0.0 36 0.0 0.0 0.0 9.961017257556941 0.0 37 0.0 0.0 0.0 10.224982999029834 0.0 38 0.0 0.0 0.0 10.499262522650492 0.0 39 0.0 0.0 0.0 10.767923969816675 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGCAAT 35 1.2119744E-7 45.000004 19 TCGTTTC 20 7.0333935E-4 45.0 18 AATCCGA 20 7.0333935E-4 45.0 37 ATTAGCG 50 2.1827873E-11 45.0 1 TTTACGG 85 0.0 45.0 2 CGACGCG 20 7.0333935E-4 45.0 38 CGACGAT 20 7.0333935E-4 45.0 35 ACCGCGT 20 7.0333935E-4 45.0 15 GGCGTAA 40 6.8157533E-9 45.0 8 TAAGTCG 20 7.0333935E-4 45.0 1 ATAGACG 20 7.0333935E-4 45.0 1 ACTTACG 45 3.8562575E-10 45.0 1 CTACGCT 20 7.0333935E-4 45.0 33 TTGCGAA 25 3.890894E-5 45.0 1 GAACGCG 20 7.0333935E-4 45.0 1 TCGTAAG 40 6.8157533E-9 45.0 1 CGTAAGC 25 3.890894E-5 45.0 20 TATAGCG 85 0.0 45.0 1 CCGAATC 20 7.0333935E-4 45.0 19 TCGACTC 20 7.0333935E-4 45.0 38 >>END_MODULE