SRR1547335_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547335_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	113176
Sequences flagged as poor quality	0
Sequence length	51
%GC	41

Per base quality graph

Per Sequence quality graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1969	1.739768148724111	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CAGCGGG	25	3.8684746E-5	45.000004	3
GGATGTG	30	2.1481337E-6	45.000004	8
CGACGGT	20	7.0063246E-4	45.000004	28
CCGATAT	20	7.0063246E-4	45.000004	11
TCGGGGT	20	7.0063246E-4	45.000004	5
GGATCCA	25	3.8684746E-5	45.000004	8
AGGGTCT	25	3.8684746E-5	45.000004	6
CACGACG	20	7.0063246E-4	45.000004	26
TAACGGG	40	6.721166E-9	45.000004	3
CGACAGG	20	7.0063246E-4	45.000004	2
TGACGGG	20	7.0063246E-4	45.000004	3
GATGGGC	25	3.8684746E-5	45.000004	4
CGAGGGT	20	7.0063246E-4	45.000004	4
CGGGCGA	20	7.0063246E-4	45.000004	6
CGGGACA	25	3.8684746E-5	45.000004	6
CGGGAAC	25	3.8684746E-5	45.000004	6
GCGATGA	20	7.0063246E-4	45.000004	9
ACTAACC	25	3.8684746E-5	45.000004	14
CGGTCTA	20	7.0063246E-4	45.000004	31
GGCGATC	20	7.0063246E-4	45.000004	8