##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547335_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 113176 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.340080935887467 31.0 31.0 33.0 30.0 34.0 2 31.746615890294763 31.0 31.0 34.0 30.0 34.0 3 31.767406517282815 31.0 31.0 34.0 30.0 34.0 4 35.59828938997667 37.0 35.0 37.0 33.0 37.0 5 35.49788824485757 37.0 35.0 37.0 33.0 37.0 6 35.542031879550436 37.0 35.0 37.0 33.0 37.0 7 35.951694705591294 37.0 35.0 37.0 35.0 37.0 8 35.95380646073372 37.0 35.0 37.0 35.0 37.0 9 37.67802360924578 39.0 37.0 39.0 35.0 39.0 10 37.06166501731816 39.0 37.0 39.0 33.0 39.0 11 36.72351028486605 39.0 37.0 39.0 32.0 39.0 12 36.56447480031102 39.0 35.0 39.0 32.0 39.0 13 36.49390330105323 39.0 35.0 39.0 32.0 39.0 14 37.61041210150562 40.0 36.0 41.0 32.0 41.0 15 37.72636424683679 40.0 36.0 41.0 32.0 41.0 16 37.75228847105393 40.0 36.0 41.0 32.0 41.0 17 37.67376475577861 40.0 36.0 41.0 32.0 41.0 18 37.49134092033647 39.0 36.0 41.0 32.0 41.0 19 37.38309358874673 39.0 36.0 41.0 32.0 41.0 20 37.1777673711741 39.0 35.0 41.0 32.0 41.0 21 37.069555382766666 39.0 35.0 41.0 32.0 41.0 22 37.01077083480597 39.0 35.0 41.0 32.0 41.0 23 36.936302749699585 39.0 35.0 41.0 31.0 41.0 24 36.81470453099597 38.0 35.0 40.0 31.0 41.0 25 36.731170919629605 38.0 35.0 40.0 31.0 41.0 26 36.60854774863929 38.0 35.0 40.0 31.0 41.0 27 36.523087933837566 38.0 35.0 40.0 31.0 41.0 28 36.539010037463775 38.0 35.0 40.0 31.0 41.0 29 36.52894606630381 38.0 35.0 40.0 31.0 41.0 30 36.45914328126104 38.0 35.0 40.0 30.0 41.0 31 36.309526754789005 38.0 35.0 40.0 30.0 41.0 32 36.124681911359296 38.0 35.0 41.0 30.0 41.0 33 35.814377606559695 38.0 35.0 40.0 28.0 41.0 34 35.498162154520394 38.0 35.0 40.0 26.0 41.0 35 35.28204743055065 38.0 34.0 40.0 25.0 41.0 36 35.10227433378101 38.0 34.0 40.0 24.0 41.0 37 35.00838517000071 38.0 34.0 40.0 24.0 41.0 38 34.93146956952004 38.0 34.0 40.0 23.0 41.0 39 34.903601470276385 38.0 34.0 40.0 23.0 41.0 40 34.73330034636319 38.0 34.0 40.0 23.0 41.0 41 34.64015338941118 38.0 34.0 40.0 22.0 41.0 42 34.560975825263306 38.0 34.0 40.0 22.0 41.0 43 34.50329575174949 38.0 33.0 40.0 22.0 41.0 44 34.41084682264791 38.0 33.0 40.0 22.0 41.0 45 34.31025129002615 38.0 33.0 40.0 22.0 41.0 46 34.26384569166608 38.0 33.0 40.0 22.0 41.0 47 34.143042694564215 37.0 33.0 40.0 21.0 41.0 48 34.09419841662543 37.0 33.0 40.0 21.0 41.0 49 33.986693291864 37.0 33.0 40.0 20.0 41.0 50 33.940110977592425 37.0 33.0 40.0 20.0 41.0 51 33.51140701208737 36.0 32.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 0.0 14 1.0 15 3.0 16 9.0 17 26.0 18 46.0 19 99.0 20 180.0 21 265.0 22 404.0 23 664.0 24 970.0 25 1513.0 26 2138.0 27 2526.0 28 2660.0 29 2635.0 30 2876.0 31 3391.0 32 4152.0 33 5231.0 34 7357.0 35 9787.0 36 9391.0 37 11411.0 38 16557.0 39 28874.0 40 9.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.385205343889165 23.527956457199405 28.548455502933486 18.538382695977944 2 34.162720011309816 24.52109987983318 28.791439881246905 12.524740227610092 3 26.243196437407224 24.9478688061073 36.143705379232344 12.665229377253128 4 24.300204990457342 26.61871774934615 35.72842298720577 13.35265427299074 5 21.87654626422563 30.090301830776845 34.56651586908885 13.466636035908675 6 20.70757050964869 39.19912348907896 30.224605923517355 9.868700077755001 7 85.43242383544214 2.678129638792677 10.648900827030467 1.240545698734714 8 86.6835724888669 2.031349402700219 10.220364741641337 1.0647133667915458 9 81.94316816286138 5.347423482010321 10.928995546759031 1.7804128083692656 10 36.33014066586556 40.09330600127235 15.725948964444758 7.850604368417333 11 22.60991729695342 25.621156428924863 35.103732240050896 16.665194034070826 12 24.738460450979005 22.867038948186895 34.64780518837916 17.746695412454937 13 22.23881388280201 24.97084187460239 34.681381211564286 18.108963031031315 14 17.01067364105464 29.693574609457833 34.882837350675054 18.412914398812468 15 16.592740510355554 29.11924789708065 38.028380575387004 16.259631017176787 16 20.816250795221602 27.808899413303173 36.482999929313635 14.891849862161589 17 20.51053226832544 26.87672298013713 33.44083551282957 19.171909238707855 18 20.55029334841309 28.209160952852198 33.96391461087156 17.27663108786315 19 22.172545415989255 28.762281755849294 32.29483282674772 16.77034000141373 20 23.335336113663672 29.10245988548809 31.906057821446243 15.656146179401995 21 23.451085035696615 26.095638651304164 34.73174524634198 15.72153106665724 22 21.89245069626069 24.74552908743903 34.610694846964016 18.751325369336254 23 18.51894394571287 27.608326853749908 35.274263094649044 18.59846610588817 24 18.01795433660847 28.202975895949674 36.839082490987494 16.93998727645437 25 19.511203788789143 29.64232699512264 33.47971301335973 17.366756202728496 26 19.096804976320065 31.55969463490493 31.457199406234537 17.88630098254047 27 17.930479960415635 30.91821587615749 34.48611012935604 16.665194034070826 28 16.512334770622747 30.55064678023609 35.766416908178414 17.17060154096275 29 17.595603308121863 28.376157489220326 35.70368275959567 18.324556443062136 30 19.008447020569733 28.261292146744893 35.199158832261254 17.531102000424116 31 20.778256874248957 29.088322612568035 32.43708913550576 17.696331377677247 32 21.298685233618436 29.052095850710398 32.34961475931293 17.29960415635824 33 20.64218562239344 30.07704813741429 31.591503498975047 17.689262741217217 34 18.949247190217008 30.165406093164627 32.54046794373365 18.34487877288471 35 19.019049975259772 30.187495582102216 32.00325157277161 18.790202869866402 36 21.27836290379586 29.999293136353998 30.56301689404114 18.159327065809006 37 19.69410475719234 31.17357036827596 31.15236445889588 17.979960415635823 38 19.579239414716902 31.24160599420372 30.337704106877784 18.841450484201598 39 19.68173464338729 30.486145472538347 29.77574750830565 20.056372375768714 40 20.50346363186541 29.669717961405244 30.97918286562522 18.847635541104122 41 18.555170707570507 29.70771188237789 31.345868381989117 20.391249028062486 42 19.69675549586485 30.359793595815365 30.045239273344173 19.898211634975613 43 20.03958436417615 30.23255813953488 29.697992507245353 20.029864989043613 44 19.38043401427865 31.474870997384603 30.520605075280976 18.624089913055773 45 19.369831059588606 30.75828797624938 29.496536368134585 20.375344596027425 46 19.648158620202164 30.96592917226267 29.94274404467378 19.443168162861387 47 19.53152611861172 30.37128013006291 30.675231497844063 19.421962253481304 48 19.831943168162862 29.7898847812257 30.995970877217783 19.38220117339365 49 19.478511345161518 30.014313988831553 30.695553827666643 19.811620838340286 50 18.566657241818053 30.772425249169434 31.253976108008764 19.406941401003746 51 18.462394854032656 31.033081218632923 30.817487806602106 19.68703612073231 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 105.0 1 145.0 2 185.0 3 1577.5 4 2970.0 5 1964.5 6 959.0 7 1010.5 8 1062.0 9 1117.5 10 1173.0 11 1224.5 12 1276.0 13 1238.5 14 1201.0 15 1201.5 16 1202.0 17 1112.5 18 1023.0 19 961.0 20 899.0 21 906.0 22 913.0 23 1000.5 24 1088.0 25 1242.5 26 1546.0 27 1695.0 28 2036.5 29 2378.0 30 2847.0 31 3316.0 32 3632.0 33 3948.0 34 4471.5 35 4995.0 36 5292.5 37 5590.0 38 5896.0 39 6202.0 40 6783.0 41 7364.0 42 7498.0 43 7632.0 44 7809.0 45 7986.0 46 7834.5 47 7683.0 48 7825.5 49 7968.0 50 7516.5 51 7065.0 52 6471.5 53 5878.0 54 5294.0 55 4710.0 56 4342.0 57 3974.0 58 3560.0 59 3146.0 60 2740.0 61 2334.0 62 1990.0 63 1646.0 64 1329.5 65 1013.0 66 742.5 67 472.0 68 406.5 69 341.0 70 260.0 71 179.0 72 139.5 73 100.0 74 73.5 75 36.5 76 26.0 77 20.5 78 15.0 79 13.5 80 12.0 81 9.5 82 7.0 83 4.0 84 1.0 85 0.5 86 0.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 113176.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.84558563653071 #Duplication Level Percentage of deduplicated Percentage of total 1 68.61760361456251 34.88902240757758 2 11.578764445216787 11.774581183289744 3 6.579198887826918 10.035696614123136 4 4.377443739681988 8.90294762140383 5 2.867321226865931 7.289531349402701 6 1.9289251889825352 5.884639852972361 7 1.3033278303936051 4.638792676892627 8 0.9158050221565732 3.725171414434156 9 0.6394995221131289 2.92641549445112 >10 1.1747328177947693 7.6853749911642035 >50 0.01563993396472326 0.5080582455644306 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0017377704405248065 1.739768148724111 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1969 1.739768148724111 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.014137272920053722 0.0 2 0.0 0.0 0.0 0.052131193892698095 0.0 3 0.0 0.0 0.0 0.10249522867038949 0.0 4 0.0 0.0 0.0 0.16611295681063123 0.0 5 0.0 0.0 0.0 0.29511557220612145 0.0 6 0.0 0.0 0.0 0.5593058598996253 0.0 7 0.0 0.0 0.0 0.7430904078603238 0.0 8 0.0 0.0 0.0 0.9604509790061497 0.0 9 0.0 0.0 0.0 1.0850356966141232 0.0 10 0.0 0.0 0.0 1.2175726302396268 0.0 11 0.0 0.0 0.0 1.3598289389976674 0.0 12 0.0 0.0 0.0 1.4720435428005938 0.0 13 0.0 0.0 0.0 1.5436134869583658 0.0 14 0.0 0.0 0.0 1.5975118399660706 0.0 15 0.0 0.0 0.0 1.6399236587262318 0.0 16 0.0 0.0 0.0 1.7079592846539902 0.0 17 0.0 0.0 0.0 1.768926274121722 0.0 18 0.0 0.0 0.0 1.8484484342970242 0.0 19 0.0 0.0 0.0 1.914716901109776 0.0 20 0.0 0.0 0.0 1.9915883226125681 0.0 21 0.0 0.0 0.0 2.0596239485403265 0.0 22 0.0 0.0 0.0 2.1515162225206756 0.0 23 0.0 0.0 0.0 2.244292076058528 0.0 24 0.0 0.0 0.0 2.324697815791334 0.0 25 0.0 0.0 0.0 2.3953841803916025 0.0 26 0.0 0.0 0.0 2.480207817911925 0.0 27 0.0 0.0 0.0 2.5508941825121934 0.0 28 0.0 0.0 0.0 2.6206969675549585 0.0 29 0.0 0.0 0.0 2.717890718880328 0.0 30 0.0 0.0 0.0 2.8159680497632005 0.0 31 0.0 0.0 0.0 2.914928960203577 0.0 32 0.0 0.0 0.0 3.021842086661483 0.0 33 0.0 0.0 0.0 3.1172686788718456 0.0 34 0.0 0.0 0.0 3.2206474870997384 0.0 35 0.0 0.0 0.0 3.346115784265215 0.0 36 0.0 0.0 0.0 3.4574468085106385 0.0 37 0.0 0.0 0.0 3.572312150986075 0.0 38 0.0 0.0 0.0 3.7074998232840883 0.0 39 0.0 0.0 0.0 3.891284371244787 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAGCGGG 25 3.8684746E-5 45.000004 3 GGATGTG 30 2.1481337E-6 45.000004 8 CGACGGT 20 7.0063246E-4 45.000004 28 CCGATAT 20 7.0063246E-4 45.000004 11 TCGGGGT 20 7.0063246E-4 45.000004 5 GGATCCA 25 3.8684746E-5 45.000004 8 AGGGTCT 25 3.8684746E-5 45.000004 6 CACGACG 20 7.0063246E-4 45.000004 26 TAACGGG 40 6.721166E-9 45.000004 3 CGACAGG 20 7.0063246E-4 45.000004 2 TGACGGG 20 7.0063246E-4 45.000004 3 GATGGGC 25 3.8684746E-5 45.000004 4 CGAGGGT 20 7.0063246E-4 45.000004 4 CGGGCGA 20 7.0063246E-4 45.000004 6 CGGGACA 25 3.8684746E-5 45.000004 6 CGGGAAC 25 3.8684746E-5 45.000004 6 GCGATGA 20 7.0063246E-4 45.000004 9 ACTAACC 25 3.8684746E-5 45.000004 14 CGGTCTA 20 7.0063246E-4 45.000004 31 GGCGATC 20 7.0063246E-4 45.000004 8 >>END_MODULE