##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547334_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 731086 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.289442008190555 31.0 31.0 33.0 30.0 34.0 2 31.702158159231608 31.0 31.0 34.0 30.0 34.0 3 31.846283474174037 31.0 31.0 34.0 30.0 34.0 4 35.603554164626324 37.0 35.0 37.0 33.0 37.0 5 35.471993718933206 37.0 35.0 37.0 33.0 37.0 6 35.510347619842264 37.0 35.0 37.0 33.0 37.0 7 35.90058488331058 37.0 35.0 37.0 35.0 37.0 8 35.8745181825394 37.0 35.0 37.0 35.0 37.0 9 37.548303482764 39.0 37.0 39.0 35.0 39.0 10 36.91418930194259 39.0 37.0 39.0 32.0 39.0 11 36.619385407462325 39.0 35.0 39.0 32.0 39.0 12 36.13401296153941 38.0 35.0 39.0 32.0 39.0 13 35.917952197142334 38.0 35.0 39.0 31.0 39.0 14 37.00424710635958 39.0 35.0 41.0 31.0 41.0 15 37.15726193635222 39.0 35.0 41.0 32.0 41.0 16 37.21730822365632 39.0 35.0 41.0 32.0 41.0 17 37.08327748035115 39.0 35.0 41.0 32.0 41.0 18 37.008714433048915 39.0 35.0 41.0 31.0 41.0 19 36.98391297330273 39.0 35.0 41.0 31.0 41.0 20 36.85597453651144 38.0 35.0 41.0 31.0 41.0 21 36.72712786183842 38.0 35.0 41.0 31.0 41.0 22 36.63858287533888 38.0 35.0 40.0 31.0 41.0 23 36.58064167553475 38.0 35.0 40.0 31.0 41.0 24 36.44482181302884 38.0 35.0 40.0 31.0 41.0 25 36.38258973636481 38.0 35.0 40.0 30.0 41.0 26 36.21833135910139 38.0 35.0 40.0 30.0 41.0 27 36.16290422740963 38.0 35.0 40.0 30.0 41.0 28 36.23872157311178 38.0 35.0 40.0 30.0 41.0 29 36.28995084025682 38.0 35.0 40.0 30.0 41.0 30 36.24868072976367 38.0 35.0 40.0 30.0 41.0 31 36.149536443045 38.0 35.0 40.0 30.0 41.0 32 36.03398505784545 38.0 35.0 40.0 30.0 41.0 33 35.87817849062901 38.0 35.0 40.0 29.0 41.0 34 35.669692758444285 38.0 34.0 40.0 28.0 41.0 35 35.58772702527473 38.0 34.0 40.0 27.0 41.0 36 35.47311123451961 38.0 34.0 40.0 27.0 41.0 37 35.38618849218833 38.0 34.0 40.0 27.0 41.0 38 35.310919645568376 38.0 34.0 40.0 27.0 41.0 39 35.29119829951606 38.0 34.0 40.0 27.0 41.0 40 35.144884459557424 38.0 34.0 40.0 26.0 41.0 41 35.095564680489026 38.0 34.0 40.0 26.0 41.0 42 35.016854378281074 38.0 34.0 40.0 26.0 41.0 43 34.961692605247535 37.0 34.0 40.0 26.0 41.0 44 34.83592627953483 37.0 34.0 40.0 25.0 41.0 45 34.731960398639835 37.0 33.0 40.0 24.0 41.0 46 34.659758222698834 37.0 33.0 40.0 24.0 41.0 47 34.52777238245569 37.0 33.0 40.0 24.0 41.0 48 34.48514948993689 37.0 33.0 40.0 24.0 41.0 49 34.38639776989301 36.0 33.0 40.0 24.0 41.0 50 34.31798447788632 36.0 33.0 40.0 24.0 41.0 51 33.897623535398026 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 2.0 12 1.0 13 5.0 14 11.0 15 27.0 16 77.0 17 167.0 18 430.0 19 701.0 20 1208.0 21 1832.0 22 2735.0 23 4080.0 24 5588.0 25 7755.0 26 10383.0 27 12957.0 28 14950.0 29 16938.0 30 19929.0 31 23822.0 32 29357.0 33 37148.0 34 58940.0 35 78103.0 36 56541.0 37 71240.0 38 104244.0 39 171867.0 40 47.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.02607353991186 23.23064591580197 29.147596862749392 14.595683681536784 2 30.45674517088277 26.53189911993938 30.079224605586756 12.932131103591097 3 29.433746508618686 25.667158172909893 31.374968197995855 13.524127120475566 4 27.037585181497114 28.390230424327644 30.755615618408775 13.816568775766463 5 23.449361634609332 32.125632278555464 29.621002180318044 14.804003906517154 6 21.451238294810736 42.09381659613233 25.92403629668739 10.530908812369544 7 88.45635123637985 3.818565804843753 6.1580990471709205 1.5669839116054747 8 88.86724680817305 3.386195331329009 6.164527839406034 1.5820300210919096 9 83.39196756605925 6.617278952134223 7.5151213400338674 2.4756321417726506 10 40.394426921046225 37.43937101791034 12.735437417759332 9.430764643284101 11 34.63792221434961 22.416241044145284 25.82651015065259 17.119326590852513 12 32.68124406704546 21.74326960166109 28.455475826373366 17.120010504920078 13 24.3432373209171 27.18667844822634 28.71987700489409 19.75020722596247 14 18.581261301679966 32.45746738413812 29.616351564658604 19.344919749523314 15 19.537920299390223 27.974821019688516 36.43948865112996 16.047770029791298 16 23.7561654853191 25.081727731074043 34.67923062403055 16.4828761595763 17 21.655044686945175 25.757024481387962 28.934762804923086 23.653168026743778 18 23.137907168240123 27.929272342788675 30.508722640017726 18.424097848953476 19 26.327545596550884 28.665027096675356 26.585791548463515 18.421635758310238 20 29.005069171068794 27.541493066479184 26.25559783664302 17.197839925809003 21 26.036608552208634 27.161100062099397 28.829576821331553 17.972714564360416 22 23.845621445356635 24.674114946805165 30.457155519323308 21.023108088514896 23 22.22748076149728 27.866625814199697 29.60239971768027 20.30349370662275 24 22.737817438714462 26.75047805593323 32.52367026587844 17.98803423947388 25 21.873623622939025 26.939375121394747 30.51515143225284 20.67184982341339 26 19.312365439907207 31.765072782135068 28.208172499541778 20.714389278415947 27 20.04182818437229 30.527051537028477 29.174406294197947 20.256713984401287 28 18.09923866685999 30.552082791901363 32.588642102297136 18.76003643894152 29 20.472146915684338 26.763882771657503 32.79149101473698 19.972479297921176 30 21.061407276298546 28.483242737516516 30.984863613856646 19.47048637232829 31 26.507004647880006 27.270663095723346 27.401837813882363 18.82049444251429 32 27.353963829152793 27.62164779519783 27.4242701952985 17.600118180350876 33 24.66412980141871 27.979608418161472 27.530687224211654 19.82557455620816 34 20.540538322440863 28.391324686835752 30.203423400256607 20.864713590466785 35 20.671576257786363 27.10925937577795 30.85847629417059 21.360688072265095 36 24.691349581307808 29.348120467359518 27.50825484279551 18.452275108537165 37 22.166202061043432 31.25979706901787 27.72327742563802 18.85072344430067 38 21.784441228528518 32.40179677903831 25.714758592012434 20.099003400420745 39 22.23691877562968 29.701293691850207 27.23222712512618 20.82956040739393 40 22.57490910782042 28.087256492396246 27.40033320293372 21.937501196849617 41 19.01445247207579 28.38831546493846 29.391070270802615 23.206161792183135 42 21.032546102647295 28.236349759125467 26.65213121301735 24.078972925209893 43 20.68443384225659 26.73310663861707 28.063456282844975 24.519003236281367 44 20.16930976656645 28.735470245634577 28.750926703561554 22.34429328423742 45 21.8398382680013 29.9717133141655 26.42698670197487 21.761461715858328 46 22.13638340769759 30.389448026634348 27.344936163460932 20.12923240220713 47 21.13472286434154 27.426732285941736 28.883058901415154 22.555485948301566 48 20.822584483904766 26.349157281085944 31.493011766057617 21.33524646895167 49 21.492136356051134 25.93716744678465 31.18757574348298 21.383120453681236 50 19.493055536557943 28.99453689442829 30.02136547547074 21.49104209354303 51 19.347518622980058 29.385598958262094 29.257296679186855 22.009585739570994 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 977.0 1 1364.5 2 1752.0 3 5371.0 4 8990.0 5 6117.0 6 3244.0 7 3223.5 8 3203.0 9 3363.5 10 3524.0 11 3507.0 12 3490.0 13 3449.5 14 3409.0 15 3314.5 16 3220.0 17 2886.5 18 2553.0 19 2591.0 20 2629.0 21 3041.5 22 3454.0 23 3814.0 24 4174.0 25 5582.5 26 8329.5 27 9668.0 28 11258.0 29 12848.0 30 15854.0 31 18860.0 32 18830.5 33 18801.0 34 21601.0 35 24401.0 36 25661.0 37 26921.0 38 29854.0 39 32787.0 40 39003.0 41 45219.0 42 50020.5 43 54822.0 44 57330.5 45 59839.0 46 58944.0 47 58049.0 48 54831.0 49 51613.0 50 47694.0 51 43775.0 52 42012.5 53 40250.0 54 37541.0 55 34832.0 56 33378.5 57 31925.0 58 31422.5 59 30920.0 60 30017.5 61 29115.0 62 25027.0 63 20939.0 64 17251.0 65 13563.0 66 10770.5 67 7978.0 68 6450.5 69 4923.0 70 3925.0 71 2927.0 72 2400.0 73 1873.0 74 1493.5 75 877.0 76 640.0 77 523.0 78 406.0 79 291.0 80 176.0 81 169.5 82 163.0 83 115.5 84 68.0 85 45.5 86 23.0 87 22.0 88 21.0 89 15.5 90 10.0 91 7.0 92 4.0 93 3.0 94 2.0 95 1.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 731086.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.955676750263297 #Duplication Level Percentage of deduplicated Percentage of total 1 80.3634536893258 17.644340117375915 2 5.653166917303804 2.482382109032095 3 1.8064652132456418 1.1898649884785026 4 1.0103740005045103 0.8873377980778958 5 0.7038373059474929 0.7726612187079662 6 0.5277146893884976 0.6951799881947672 7 0.4437258870341832 0.6819611499012462 8 0.39208823787162445 0.6886850086631784 9 0.3404168003553679 0.6726673106065236 >10 6.477038806222311 36.12893844273292 >50 2.070992467984687 30.837529316462586 >100 0.20634888720861916 5.974807343367192 >500 0.003126498291039684 0.43520540621493564 >1k 6.252996582079368E-4 0.1493701835841798 >5k 6.252996582079368E-4 0.7590696186001196 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5529 0.7562721759136408 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 1088 0.14881970110219592 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 817 0.11175155864015997 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.367828135130477E-4 0.0 0.0 0.024073775178296397 0.0 2 1.367828135130477E-4 0.0 0.0 0.08740421783483748 0.0 3 1.367828135130477E-4 0.0 0.0 0.12310453216174294 0.0 4 1.367828135130477E-4 0.0 0.0 0.22569164229652872 0.0 5 1.367828135130477E-4 0.0 0.0 0.4025518201688994 0.0 6 1.367828135130477E-4 0.0 0.0 0.622225018670854 0.0 7 2.735656270260954E-4 0.0 0.0 0.7349340570056053 0.0 8 2.735656270260954E-4 0.0 0.0 0.9911282667155438 0.0 9 2.735656270260954E-4 0.0 0.0 1.0647174203855634 0.0 10 2.735656270260954E-4 0.0 0.0 1.2166831261985593 0.0 11 2.735656270260954E-4 0.0 0.0 1.4085894135573653 0.0 12 2.735656270260954E-4 0.0 0.0 1.5773794054324661 0.0 13 2.735656270260954E-4 0.0 0.0 1.6357856668025377 0.0 14 2.735656270260954E-4 0.0 0.0 1.6593123107267818 0.0 15 2.735656270260954E-4 0.0 0.0 1.6966540188158439 0.0 16 2.735656270260954E-4 0.0 0.0 1.7783133584831332 0.0 17 4.1034844053914314E-4 0.0 0.0 1.8837729077016931 0.0 18 4.1034844053914314E-4 0.0 0.0 2.015494757114758 0.0 19 4.1034844053914314E-4 0.0 0.0 2.088947127971265 0.0 20 4.1034844053914314E-4 0.0 0.0 2.1774456083142066 0.0 21 4.1034844053914314E-4 0.0 0.0 2.2842729856678967 0.0 22 4.1034844053914314E-4 0.0 0.0 2.4065568209485613 0.0 23 4.1034844053914314E-4 0.0 0.0 2.5333544890751565 0.0 24 4.1034844053914314E-4 0.0 0.0 2.6251357569424116 0.0 25 4.1034844053914314E-4 0.0 0.0 2.706247965355649 0.0 26 4.1034844053914314E-4 0.0 0.0 2.783256689363495 0.0 27 4.1034844053914314E-4 0.0 0.0 2.8632746352686276 0.0 28 4.1034844053914314E-4 0.0 0.0 2.955603034389935 0.0 29 4.1034844053914314E-4 0.0 0.0 3.0554544882544596 0.0 30 4.1034844053914314E-4 0.0 0.0 3.1695313547243416 0.0 31 4.1034844053914314E-4 0.0 0.0 3.2844289180753017 0.0 32 4.1034844053914314E-4 0.0 0.0 3.388520639158731 0.0 33 4.1034844053914314E-4 0.0 0.0 3.497262975901604 0.0 34 4.1034844053914314E-4 0.0 0.0 3.610108797049868 0.0 35 4.1034844053914314E-4 0.0 0.0 3.729793758873785 0.0 36 4.1034844053914314E-4 0.0 0.0 3.853171856662554 0.0 37 4.1034844053914314E-4 0.0 0.0 3.9844833576350798 0.0 38 4.1034844053914314E-4 0.0 0.0 4.117025903929223 0.0 39 4.1034844053914314E-4 0.0 0.0 4.261605337812514 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTACGT 20 7.0316E-4 45.0 8 CGGTTTA 20 7.0316E-4 45.0 34 CAATTCG 20 7.0316E-4 45.0 1 ACGGGTA 35 1.2111195E-7 45.0 5 TACGACG 20 7.0316E-4 45.0 1 TATAGCG 45 3.8380676E-10 45.0 1 ATAACGG 40 6.8084773E-9 45.0 2 GCGTATA 20 7.0316E-4 45.0 30 TCGAATC 25 3.8894075E-5 45.0 13 GATCGCT 30 2.1644137E-6 44.999996 9 GGCACGC 30 2.1644137E-6 44.999996 9 TAGGTAT 30 2.1644137E-6 44.999996 17 CGGTCTA 170 0.0 43.676468 31 CGTTTTT 2500 0.0 42.210003 1 GTAACGG 80 0.0 42.1875 2 ATAGCGG 135 0.0 41.666668 2 AGGGCGC 130 0.0 41.53846 6 TGGGCGA 320 0.0 41.484375 6 CGACGGT 185 0.0 41.351353 28 CGGGGTA 115 0.0 41.08696 6 >>END_MODULE