##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547333_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2121596 Sequences flagged as poor quality 0 Sequence length 51 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.334638168623997 31.0 31.0 33.0 30.0 34.0 2 31.737151182411733 31.0 31.0 34.0 30.0 34.0 3 31.64882522402946 31.0 31.0 34.0 30.0 34.0 4 35.519556975032 37.0 35.0 37.0 33.0 37.0 5 35.44968080633636 37.0 35.0 37.0 33.0 37.0 6 35.50861049888857 37.0 35.0 37.0 33.0 37.0 7 35.96173823857134 37.0 35.0 37.0 35.0 37.0 8 35.963105134059454 37.0 35.0 37.0 35.0 37.0 9 37.666824880891554 39.0 37.0 39.0 35.0 39.0 10 37.051565896617454 39.0 37.0 39.0 33.0 39.0 11 36.72812448741419 39.0 37.0 39.0 32.0 39.0 12 36.61968301222287 39.0 35.0 39.0 32.0 39.0 13 36.56682610638406 39.0 35.0 39.0 32.0 39.0 14 37.737857254632836 40.0 36.0 41.0 32.0 41.0 15 37.83343435790791 40.0 36.0 41.0 32.0 41.0 16 37.85088254314205 40.0 36.0 41.0 33.0 41.0 17 37.75658560819308 40.0 36.0 41.0 32.0 41.0 18 37.504705891225285 39.0 36.0 41.0 32.0 41.0 19 37.319969966006724 39.0 36.0 41.0 32.0 41.0 20 37.03656445430704 39.0 35.0 41.0 32.0 41.0 21 36.925086585759026 38.0 35.0 41.0 32.0 41.0 22 36.86140716705725 38.0 35.0 41.0 31.0 41.0 23 36.77036815680271 38.0 35.0 40.0 31.0 41.0 24 36.609593909490776 38.0 35.0 40.0 31.0 41.0 25 36.5353248215023 38.0 35.0 40.0 31.0 41.0 26 36.3993470010313 38.0 35.0 40.0 31.0 41.0 27 36.30094843693144 38.0 35.0 40.0 30.0 41.0 28 36.26745478403994 38.0 35.0 40.0 30.0 41.0 29 36.199822209317894 38.0 35.0 40.0 30.0 41.0 30 36.09127138248753 38.0 35.0 40.0 30.0 41.0 31 35.910668195075786 38.0 35.0 40.0 30.0 41.0 32 35.63081142686921 38.0 35.0 40.0 28.0 41.0 33 35.22928352051946 38.0 34.0 40.0 25.0 41.0 34 34.81184636471788 38.0 34.0 40.0 23.0 41.0 35 34.51189434746295 38.0 34.0 40.0 21.0 41.0 36 34.32439870738821 38.0 33.0 40.0 21.0 41.0 37 34.21081063501251 38.0 33.0 40.0 20.0 41.0 38 34.11468583085564 38.0 33.0 40.0 18.0 41.0 39 34.06010805073162 38.0 33.0 40.0 18.0 41.0 40 33.92277229029467 38.0 33.0 40.0 18.0 41.0 41 33.81007647073241 37.0 33.0 40.0 18.0 41.0 42 33.728636837550596 37.0 33.0 40.0 18.0 41.0 43 33.673269557446375 37.0 33.0 40.0 18.0 41.0 44 33.54706739643174 37.0 33.0 40.0 17.0 41.0 45 33.46464831193121 37.0 33.0 40.0 17.0 41.0 46 33.392046365094956 37.0 33.0 40.0 17.0 41.0 47 33.27090548813252 37.0 32.0 40.0 17.0 41.0 48 33.200440611690446 37.0 32.0 40.0 16.0 41.0 49 33.082493085394205 36.0 32.0 40.0 15.0 41.0 50 33.0170748813629 36.0 32.0 40.0 15.0 41.0 51 32.637345658645664 36.0 31.0 40.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 4.0 13 14.0 14 25.0 15 94.0 16 222.0 17 529.0 18 1230.0 19 2461.0 20 4196.0 21 6447.0 22 9881.0 23 14633.0 24 22385.0 25 35168.0 26 50510.0 27 58429.0 28 57878.0 29 55833.0 30 58531.0 31 66412.0 32 78826.0 33 96465.0 34 134988.0 35 181960.0 36 187739.0 37 212578.0 38 295557.0 39 488460.0 40 139.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.31250624529835 21.986466791981133 26.717857688268644 22.983169274451875 2 38.45864151327586 23.338609235688605 26.465264828930675 11.737484422104869 3 25.754337772130036 23.291946251784033 39.090288631765894 11.86342734432003 4 22.892577097618965 25.446126406723995 38.70859485029195 12.952701645365092 5 20.709927809064496 28.886790887614794 37.782876664548766 12.620404638771943 6 19.549669211291874 37.3874667938665 33.804409510576 9.258454484265618 7 80.37307762646611 2.67030103752081 15.463735791357072 1.492885544656004 8 81.11779999585218 2.288088778447923 15.111595233022687 1.482515992677211 9 76.3652457866625 5.357758970133805 16.205394429476677 2.0716008137270245 10 32.75260699963612 38.44021199134991 20.63983906455329 8.167341944460679 11 20.494382530887126 25.561888314269073 37.84231305111812 16.101416103725686 12 22.782141369044815 22.923025872974872 37.349382257508026 16.945450500472287 13 21.16953463336092 23.7927013437054 37.910280750906395 17.127483272027284 14 15.63808566758233 28.31769102128775 37.99088045037792 18.053342860752 15 15.541554565525198 29.503025081118178 40.00394042975194 14.951479923604683 16 19.610519627676524 27.777625900501317 38.778966400766215 13.83288807105594 17 19.112404058077033 27.579567457706368 35.914236263643026 17.393792220573566 18 18.550987087079726 29.148622075079327 36.25412189691157 16.046268940929377 19 20.415856741811353 29.63566107779238 33.87897601616896 16.069506164227306 20 21.66873429248547 29.456409231540782 34.073310847116986 14.801545628856767 21 21.627161815915944 27.376748447866607 36.09410085614792 14.901988880069533 22 19.91557299316175 25.64130965556119 36.81139104711736 17.6317263041597 23 17.71812352587392 28.61666405856723 36.67705821466481 16.988154200894044 24 17.502059770097606 28.50830224038884 37.520668402466825 16.468969587046733 25 18.569935086604612 29.75594788074638 35.15688189457371 16.517235138075296 26 17.75663227117698 32.29945757816285 33.195763943748005 16.748146206912153 27 17.016104856909607 31.00557316284533 35.900048831162955 16.078273149082108 28 16.479197736043997 30.3223139560972 37.39967458460517 15.798813723253627 29 16.913069217702144 28.997462287824828 36.465472219970245 17.62399627450278 30 17.65152272157376 28.929824528326787 36.2419141061729 17.176738643926555 31 19.40656939398453 28.644614714582794 34.74356097956444 17.205254911868234 32 19.35538151467103 29.886651370006355 34.41305507740399 16.344912037918625 33 18.923772480717346 29.976913606549033 33.96103687978296 17.138277032950665 34 17.577616096561268 30.689914573745426 34.06185720561313 17.670612124080172 35 17.735327555293278 30.577404934775522 33.694492259600786 17.99277525033041 36 18.739995739056823 31.77480538236309 32.12407074673972 17.36112813184037 37 17.88200958146603 32.565248049110195 32.411165933570764 17.141576435853008 38 17.944698236610552 32.48841909581277 31.287719245322858 18.279163422253813 39 17.95860286312757 31.344091900625752 31.477010703263016 19.220294532983658 40 19.419625602612374 30.787624033981963 32.05746994243956 17.735280420966106 41 17.271997119149923 31.63231831130903 32.69213365786889 18.403550911672156 42 18.55928272866276 32.596215302065055 30.34833210469854 18.49616986457365 43 18.86688134781551 31.859222962335902 30.96635740263462 18.307538287213966 44 18.90572003340881 32.36681253169784 30.93204361245025 17.795423822443105 45 18.440457089851225 31.99958898866702 30.49991610089763 19.060037820584128 46 18.952948629239497 31.700568817060365 30.22993067483159 19.116551878868552 47 18.409112762278966 31.95311454207116 31.393064466561967 18.244708229087912 48 18.352551569667362 31.558835895241128 31.46362455434494 18.62498798074657 49 18.040522323760037 31.16663115880686 31.512738523262673 19.280107994170425 50 17.124608078069528 31.80539556070053 32.44910906694771 18.62088729428223 51 17.138889779203957 31.782676815001537 32.05285077837628 19.025582627418228 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2654.0 1 3178.0 2 3702.0 3 49939.0 4 96176.0 5 61949.5 6 27723.0 7 27994.5 8 28266.0 9 30595.0 10 32924.0 11 34632.5 12 36341.0 13 37076.5 14 37812.0 15 36027.0 16 34242.0 17 31760.0 18 29278.0 19 26762.0 20 24246.0 21 23504.5 22 22763.0 23 23332.0 24 23901.0 25 25442.5 26 29596.5 27 32209.0 28 37907.5 29 43606.0 30 50957.0 31 58308.0 32 62838.0 33 67368.0 34 73972.0 35 80576.0 36 86152.5 37 91729.0 38 99267.5 39 106806.0 40 111268.5 41 115731.0 42 122871.5 43 130012.0 44 136056.5 45 142101.0 46 146090.5 47 150080.0 48 147173.5 49 144267.0 50 132611.0 51 120955.0 52 108161.0 53 95367.0 54 86008.0 55 76649.0 56 71624.0 57 66599.0 58 61705.5 59 56812.0 60 50049.0 61 43286.0 62 37833.5 63 32381.0 64 25172.5 65 17964.0 66 13841.5 67 9719.0 68 7367.5 69 5016.0 70 4086.5 71 3157.0 72 2518.0 73 1879.0 74 1432.5 75 704.0 76 422.0 77 370.5 78 319.0 79 218.5 80 118.0 81 102.0 82 86.0 83 57.5 84 29.0 85 28.5 86 28.0 87 17.5 88 7.0 89 6.0 90 5.0 91 4.0 92 3.0 93 3.0 94 3.0 95 1.5 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2121596.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.46429232898048 #Duplication Level Percentage of deduplicated Percentage of total 1 76.7400802461618 20.30871916983846 2 6.73264651354686 3.5634945096439075 3 3.2118540837518785 2.5499833617131844 4 2.1424930689452513 2.267982515575267 5 1.5050254437870325 1.9914716653466804 6 1.089614119887833 1.7301519956697844 7 0.8031397008551227 1.4878166677107931 8 0.6245976088396777 1.3223626966652349 9 0.4978330748376696 1.1857320021185378 >10 5.342393534996851 32.43566628695174 >50 1.141969953736695 20.66487347559561 >100 0.16383195275423776 5.712340387050993 >500 0.002712418739460813 0.5009921974007829 >1k 0.0016274512436764879 0.892348983182004 >5k 0.0 0.0 >10k+ 1.8082791596405422E-4 3.3860640855370336 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 70757 3.3350835880158143 No Hit CGTTTCTGTCTCTTATACACATCTGACGCCGTTCTACTCGTATGCCGTCTT 4389 0.2068725619769268 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCCGTTCTACTCGTATGCCGTCT 3510 0.16544148838892986 No Hit CGTTCTGTCTCTTATACACATCTGACGCCGTTCTACTCGTATGCCGTCTTC 2820 0.1329188026372599 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 9.426865435266657E-5 0.0 0.0 0.04237376013152363 0.0 2 9.426865435266657E-5 0.0 0.0 0.1336729518720812 0.0 3 9.426865435266657E-5 0.0 0.0 0.21912748704277346 0.0 4 9.426865435266657E-5 0.0 0.0 0.35501575229214233 0.0 5 9.426865435266657E-5 0.0 0.0 0.6961740123944427 0.0 6 1.4140298152899987E-4 0.0 0.0 1.3592125927839231 0.0 7 1.4140298152899987E-4 0.0 0.0 1.8198563722782284 0.0 8 1.4140298152899987E-4 0.0 0.0 2.3243822103736997 0.0 9 1.4140298152899987E-4 0.0 0.0 2.6242507998695324 0.0 10 1.4140298152899987E-4 0.0 0.0 2.89885538999885 0.0 11 1.4140298152899987E-4 0.0 0.0 3.1424455928461406 0.0 12 1.4140298152899987E-4 0.0 0.0 3.3250439763272555 0.0 13 1.4140298152899987E-4 0.0 0.0 3.44080588387233 0.0 14 1.4140298152899987E-4 0.0 0.0 3.5193316729481015 0.0 15 1.4140298152899987E-4 0.0 0.0 3.580936238567569 0.0 16 1.4140298152899987E-4 0.0 0.0 3.6636098484348576 0.0 17 1.4140298152899987E-4 0.0 0.0 3.759009726639756 0.0 18 1.4140298152899987E-4 0.0 0.0 3.883444350385276 0.0 19 1.8853730870533315E-4 0.0 0.0 3.971114198933256 0.0 20 1.8853730870533315E-4 0.0 0.0 4.063026136927106 0.0 21 1.8853730870533315E-4 0.0 0.0 4.160547059854939 0.0 22 1.8853730870533315E-4 0.0 0.0 4.273716579405316 0.0 23 1.8853730870533315E-4 0.0 0.0 4.399470964311773 0.0 24 1.8853730870533315E-4 0.0 0.0 4.504297707951938 0.0 25 1.8853730870533315E-4 0.0 0.0 4.597105198162138 0.0 26 1.8853730870533315E-4 0.0 0.0 4.689771285390809 0.0 27 1.8853730870533315E-4 0.0 0.0 4.787999223226288 0.0 28 1.8853730870533315E-4 0.0 0.0 4.891270534069634 0.0 29 1.8853730870533315E-4 0.0 0.0 5.0067496356516505 0.0 30 1.8853730870533315E-4 0.0 0.0 5.145937303803363 0.0 31 2.3567163588166646E-4 0.0 0.0 5.263443181453962 0.0 32 2.3567163588166646E-4 0.0 0.0 5.383635715753612 0.0 33 2.3567163588166646E-4 0.0 0.0 5.504865205251141 0.0 34 2.3567163588166646E-4 0.0 0.0 5.625387679841025 0.0 35 2.3567163588166646E-4 0.0 0.0 5.758165079496756 0.0 36 2.3567163588166646E-4 0.0 0.0 5.892497911949306 0.0 37 2.3567163588166646E-4 0.0 0.0 6.025510983240919 0.0 38 2.8280596305799974E-4 0.0 0.0 6.17756632271177 0.0 39 2.8280596305799974E-4 0.0 0.0 6.3752005565621355 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCCGCGT 20 7.0346374E-4 45.0 42 CGTTTTT 26685 0.0 44.17369 1 CGACGGT 255 0.0 42.35294 28 CGAACGG 65 0.0 41.538464 2 GCGTAAG 115 0.0 41.086956 1 ACGGTCT 270 0.0 40.833336 30 GCGTTAG 100 0.0 40.5 1 GCGCGAC 230 0.0 40.108692 9 CGGGTTC 45 1.929584E-8 40.0 6 CGTTAGG 260 0.0 39.807693 2 GTTTTTT 30085 0.0 39.66761 2 TACGGGA 850 0.0 39.441177 4 GACGGTC 275 0.0 39.272728 29 TAGGGAC 2790 0.0 38.870968 5 TAGGGCG 425 0.0 38.64706 5 GCGCGAA 35 6.250788E-6 38.57143 34 GTTAGCG 140 0.0 38.57143 1 CGATTCG 35 6.250788E-6 38.57143 10 CACGACG 280 0.0 38.57143 26 GTAGGGA 3590 0.0 38.41922 4 >>END_MODULE