SRR1547332_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547332_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	851785
Sequences flagged as poor quality	0
Sequence length	51
%GC	41

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	13911	1.633158602229436	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	2251	0.26426856542437355	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	964	0.11317409909777701	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCTTCGT	25	3.889952E-5	45.0	13
AGCGTTG	40	6.8121153E-9	45.0	1
CTATGCG	20	7.032257E-4	45.0	1
CGGCGAT	35	1.2114288E-7	45.0	6
GCGACTA	20	7.032257E-4	45.0	13
ACGCCGA	55	1.8189894E-12	45.0	12
GTCGATC	20	7.032257E-4	45.0	20
CGTATGG	100	0.0	45.0	2
ATTAGAC	20	7.032257E-4	45.0	33
CTCCGAC	25	3.889952E-5	45.0	17
ACGTTTC	20	7.032257E-4	45.0	22
TTTACGG	45	3.8380676E-10	45.0	2
ACGTTAG	25	3.889952E-5	45.0	1
GAGTCGG	45	3.8380676E-10	45.0	2
AGCCCGA	40	6.8121153E-9	45.0	45
CGCATCG	110	0.0	45.0	21
CGCATCA	25	3.889952E-5	45.0	30
GAATCGG	25	3.889952E-5	45.0	2
CGACCGT	20	7.032257E-4	45.0	20
CCTACGG	25	3.889952E-5	45.0	43