##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547332_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 851785 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.240491438567243 31.0 31.0 33.0 30.0 34.0 2 31.625621488990767 31.0 31.0 34.0 30.0 34.0 3 31.648184694494503 31.0 31.0 34.0 30.0 34.0 4 35.46632424848993 37.0 35.0 37.0 33.0 37.0 5 35.363098669265135 37.0 35.0 37.0 33.0 37.0 6 35.404413085461705 37.0 35.0 37.0 33.0 37.0 7 35.875222033729166 37.0 35.0 37.0 35.0 37.0 8 35.87250773375911 37.0 35.0 37.0 35.0 37.0 9 37.613620808067765 39.0 37.0 39.0 35.0 39.0 10 36.85603996313624 39.0 37.0 39.0 32.0 39.0 11 36.53825202369143 39.0 35.0 39.0 32.0 39.0 12 35.80235270637544 37.0 35.0 39.0 31.0 39.0 13 35.34587249129768 37.0 35.0 39.0 30.0 39.0 14 36.379648620250414 38.0 35.0 41.0 30.0 41.0 15 36.701940043555595 38.0 35.0 41.0 31.0 41.0 16 36.85244163726762 38.0 35.0 41.0 32.0 41.0 17 36.796331233820744 38.0 35.0 41.0 32.0 41.0 18 36.67206982982795 38.0 35.0 40.0 31.0 41.0 19 36.52002441930769 37.0 35.0 40.0 31.0 41.0 20 36.26612466760979 37.0 35.0 40.0 31.0 41.0 21 36.0855826294194 37.0 35.0 40.0 31.0 41.0 22 35.997385490470016 37.0 34.0 40.0 30.0 41.0 23 35.97134018561022 36.0 34.0 40.0 31.0 41.0 24 35.79221986768962 36.0 34.0 40.0 30.0 41.0 25 35.676288030430214 36.0 34.0 40.0 30.0 41.0 26 35.5070223119684 36.0 34.0 40.0 30.0 41.0 27 35.386428500149684 36.0 34.0 40.0 29.0 41.0 28 35.45027559771538 36.0 34.0 40.0 29.0 41.0 29 35.48902246458907 36.0 34.0 40.0 30.0 41.0 30 35.402009896863646 36.0 34.0 40.0 29.0 41.0 31 35.17594698192619 36.0 34.0 40.0 29.0 41.0 32 34.91714341060244 35.0 34.0 40.0 27.0 41.0 33 34.60542272991424 35.0 33.0 40.0 25.0 41.0 34 34.337635670973306 35.0 34.0 40.0 24.0 41.0 35 34.14260171287356 35.0 33.0 40.0 23.0 41.0 36 33.91066525003375 35.0 33.0 40.0 22.0 41.0 37 33.78830690843347 35.0 33.0 40.0 22.0 41.0 38 33.724939978985304 35.0 33.0 40.0 22.0 41.0 39 33.71349225450084 35.0 33.0 40.0 21.0 41.0 40 33.56040432738308 35.0 33.0 40.0 21.0 41.0 41 33.49493475466227 35.0 33.0 40.0 20.0 41.0 42 33.404301554969855 35.0 33.0 40.0 20.0 41.0 43 33.33767323913899 35.0 33.0 40.0 19.0 41.0 44 33.20585828583504 35.0 33.0 40.0 18.0 41.0 45 33.08268988066237 35.0 32.0 40.0 18.0 41.0 46 33.01738232065603 35.0 32.0 39.0 18.0 41.0 47 32.844734293278236 35.0 32.0 39.0 18.0 41.0 48 32.819335865271164 35.0 32.0 39.0 18.0 41.0 49 32.75783912607054 35.0 32.0 39.0 18.0 41.0 50 32.63449696813163 35.0 32.0 39.0 18.0 41.0 51 32.18465692633705 35.0 31.0 39.0 17.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 3.0 13 2.0 14 13.0 15 36.0 16 101.0 17 278.0 18 544.0 19 1109.0 20 1999.0 21 3305.0 22 4703.0 23 6995.0 24 10133.0 25 14595.0 26 19509.0 27 21613.0 28 22442.0 29 23713.0 30 26658.0 31 31078.0 32 37543.0 33 48014.0 34 79071.0 35 120603.0 36 65323.0 37 70354.0 38 96038.0 39 145966.0 40 44.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.39182422794485 23.699290313870282 28.649130942667455 17.259754515517415 2 32.171263875273695 25.458302271113016 29.847555427719435 12.522878425893857 3 27.87957054890612 24.09211244621589 35.44239450095975 12.585922503918242 4 23.25997757650111 27.706756986798315 34.77485515711125 14.258410279589334 5 21.543699407714385 30.236385942462007 35.28942162634937 12.930493023474234 6 18.58485415920684 41.138550221006476 30.900755472331632 9.375840147455051 7 84.39441877938681 3.856607007636904 10.458272920983582 1.2907012919926977 8 85.33127491092236 2.878895495929137 9.815270285341958 1.9745593078065473 9 82.49734381328622 4.357789817853097 11.228537717851337 1.9163286510093511 10 45.1589309508855 22.6930504763526 18.810967556366922 13.337051016394982 11 38.26094613077244 25.269639639110807 22.789671102449564 13.679743127667193 12 35.19691001837318 23.494543810938207 26.734328498388678 14.574217672299936 13 19.65660348562137 37.68627059645333 28.465633933445645 14.19149198447965 14 15.230016964374812 41.355271576747654 30.021777796040077 13.392933662837454 15 13.408195730143168 27.877222538551393 45.62583280992269 13.088748921382741 16 14.996037732526402 22.93513034392482 45.982143381252314 16.08668854229647 17 15.526805473212137 24.601043690602676 30.082239062674265 29.78991177351092 18 19.275051802978453 27.356903443944187 35.71934232229964 17.648702430777718 19 25.026150965325755 30.512746761213215 26.958680887782716 17.50242138567831 20 27.23621571171129 27.971377753775894 27.29679437886321 17.495612155649606 21 20.177861784370467 31.23851676185892 30.629560276360817 17.95406117740979 22 20.830608662984204 26.004449479622206 29.46987796216181 23.695063895231776 23 16.385472859935312 33.12889989844855 28.582447448593246 21.903179793022886 24 17.915319006556818 28.738824938217977 37.73358300510105 15.61227305012415 25 16.504047382848956 28.77885851476605 36.20397165951502 18.51312244286997 26 15.255492876723586 37.466614227768744 28.4201999330817 18.857692962425965 27 15.429832645561966 36.88043344271148 32.19216116743075 15.497572744295802 28 14.303492078400065 31.48646665531795 39.228913399508095 14.98112786677389 29 14.345521463749655 28.339663177914616 38.528736711728904 18.786078646606832 30 16.826077002999583 33.74325680776252 32.63887013741731 16.791796051820587 31 25.94175760315103 29.891580621870546 26.922404127802203 17.244257647176223 32 25.179593442007082 30.602440756763738 28.422078341365488 15.795887459863698 33 23.790745317186847 31.289938188627413 26.39598020627271 18.523336287913033 34 17.593876388994875 31.47860082062962 28.69644335131518 22.231079439060323 35 16.929859060678456 28.973860774726017 31.91885276214068 22.177427402454843 36 25.094478066648275 29.300351614550618 27.874991928714405 17.7301783900867 37 18.133449168510833 33.527474656163236 29.677559478037296 18.661516697288636 38 18.42295884524851 35.81572814736113 24.99140041207582 20.769912595314548 39 17.709515898965115 33.63313512212589 28.443210434558015 20.21413854435098 40 21.52409352125243 29.717240853032163 26.867343284983885 21.891322340731524 41 15.971636034914912 27.57573800900462 29.4759827890841 26.976643166996368 42 19.43142929260318 29.4177521322869 25.862629654196773 25.28818892091314 43 19.506213422401192 30.00428511889737 27.27448828049332 23.215013178208117 44 18.41802802350358 33.13852674090293 28.43147038278439 20.0119748528091 45 17.05477321154986 38.5209882775583 24.143064270913435 20.281174239978398 46 21.890265736071896 34.92430601618953 24.862142442048167 18.323285805690404 47 20.024067106135938 31.409686716718422 26.26930504763526 22.29694112951038 48 19.9362515188692 29.137517096450395 31.043397101381213 19.88283428329919 49 19.45103517906514 27.464559718708358 31.25084381622123 21.83356128600527 50 18.026027694782133 32.559742188463055 29.196921758424953 20.21730835832986 51 15.979854071156455 35.08655353170108 27.026186185481077 21.907406211661392 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2612.0 1 2195.5 2 1779.0 3 9980.5 4 18182.0 5 12171.5 6 6161.0 7 6867.0 8 7573.0 9 8516.0 10 9459.0 11 10497.5 12 11536.0 13 11623.5 14 11711.0 15 10873.5 16 10036.0 17 9158.0 18 8280.0 19 7526.0 20 6772.0 21 6531.5 22 6291.0 23 6634.0 24 6977.0 25 6843.0 26 8024.0 27 9339.0 28 10226.5 29 11114.0 30 12629.5 31 14145.0 32 16682.0 33 19219.0 34 21169.0 35 23119.0 36 24920.0 37 26721.0 38 33414.0 39 40107.0 40 48324.0 41 56541.0 42 66835.0 43 77129.0 44 76860.0 45 76591.0 46 75414.0 47 74237.0 48 71967.0 49 69697.0 50 68371.0 51 67045.0 52 61392.0 53 55739.0 54 46183.0 55 36627.0 56 30634.5 57 24642.0 58 21246.0 59 17850.0 60 16715.5 61 15581.0 62 12640.0 63 9699.0 64 7454.5 65 5210.0 66 4108.0 67 3006.0 68 2327.5 69 1649.0 70 1391.5 71 1134.0 72 798.0 73 462.0 74 424.0 75 335.5 76 285.0 77 236.5 78 188.0 79 153.5 80 119.0 81 84.5 82 50.0 83 37.0 84 24.0 85 27.5 86 31.0 87 21.0 88 11.0 89 8.5 90 6.0 91 4.0 92 2.0 93 2.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 851785.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.438517799408192 #Duplication Level Percentage of deduplicated Percentage of total 1 80.95153859341639 22.211902325849348 2 7.8971150761061235 4.333702651594253 3 2.9004970277212516 2.3875601796678034 4 1.514641760077987 1.662380995745072 5 0.930636345348182 1.276764096330614 6 0.6530630503639964 1.0751449278928995 7 0.4731284693810783 0.908736074996363 8 0.34645033408438736 0.76048669267083 9 0.28512285853423935 0.7041013766018882 >10 2.6229203149645075 15.7865642385053 >50 0.6593590904393738 13.105494938823176 >100 0.7620884402382546 33.39665676404402 >500 0.0025789794931920635 0.4843753000149338 >1k 4.298299155320105E-4 0.2654805941888522 >5k 0.0 0.0 >10k+ 4.298299155320105E-4 1.6406488430746884 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13911 1.633158602229436 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2251 0.26426856542437355 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 964 0.11317409909777701 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.3480103547256643E-4 0.0 0.0 0.07079251219497879 0.0 2 2.3480103547256643E-4 0.0 0.0 0.24536708206883193 0.0 3 2.3480103547256643E-4 0.0 0.0 0.33975709832880363 0.0 4 2.3480103547256643E-4 0.0 0.0 0.6074302787675294 0.0 5 2.3480103547256643E-4 0.0 0.0 1.0830197761172127 0.0 6 2.3480103547256643E-4 0.0 0.0 1.6865758377994446 0.0 7 2.3480103547256643E-4 0.0 0.0 2.014475483836884 0.0 8 2.3480103547256643E-4 0.0 0.0 2.7530421409158414 0.0 9 2.3480103547256643E-4 0.0 0.0 2.9711723028698556 0.0 10 2.3480103547256643E-4 0.0 0.0 3.368925256960383 0.0 11 2.3480103547256643E-4 0.0 0.0 3.903684615249153 0.0 12 2.3480103547256643E-4 0.0 0.0 4.272322240941082 0.0 13 2.3480103547256643E-4 0.0 0.0 4.430225937296384 0.0 14 2.3480103547256643E-4 0.0 0.0 4.492096010143404 0.0 15 2.3480103547256643E-4 0.0 0.0 4.5752155767006935 0.0 16 2.3480103547256643E-4 0.0 0.0 4.79358053969018 0.0 17 2.3480103547256643E-4 0.0 0.0 5.063836531519104 0.0 18 2.3480103547256643E-4 0.0 0.0 5.392675381698433 0.0 19 2.3480103547256643E-4 0.0 0.0 5.5816902152538495 0.0 20 2.3480103547256643E-4 0.0 0.0 5.7561473846099664 0.0 21 2.3480103547256643E-4 0.0 0.0 6.046244063936322 0.0 22 2.3480103547256643E-4 0.0 0.0 6.32741830391472 0.0 23 2.3480103547256643E-4 0.0 0.0 6.655787552023105 0.0 24 2.3480103547256643E-4 0.0 0.0 6.872156706211074 0.0 25 2.3480103547256643E-4 0.0 0.0 7.069859178078976 0.0 26 2.3480103547256643E-4 0.0 0.0 7.248894967626807 0.0 27 2.3480103547256643E-4 0.0 0.0 7.427343754585958 0.0 28 2.3480103547256643E-4 0.0 0.0 7.635612273050124 0.0 29 2.3480103547256643E-4 0.0 0.0 7.840593577017675 0.0 30 2.3480103547256643E-4 0.0 0.0 8.088660870994442 0.0 31 2.3480103547256643E-4 0.0 0.0 8.327336123552305 0.0 32 2.3480103547256643E-4 0.0 0.0 8.564602569897334 0.0 33 2.3480103547256643E-4 0.0 0.0 8.801751615724625 0.0 34 2.3480103547256643E-4 0.0 0.0 9.028334614955652 0.0 35 2.3480103547256643E-4 0.0 0.0 9.301173418174773 0.0 36 2.3480103547256643E-4 0.0 0.0 9.544662091959825 0.0 37 2.3480103547256643E-4 0.0 0.0 9.794725194738108 0.0 38 2.3480103547256643E-4 0.0 0.0 10.038096468005424 0.0 39 2.3480103547256643E-4 0.0 0.0 10.284402754216146 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCTTCGT 25 3.889952E-5 45.0 13 AGCGTTG 40 6.8121153E-9 45.0 1 CTATGCG 20 7.032257E-4 45.0 1 CGGCGAT 35 1.2114288E-7 45.0 6 GCGACTA 20 7.032257E-4 45.0 13 ACGCCGA 55 1.8189894E-12 45.0 12 GTCGATC 20 7.032257E-4 45.0 20 CGTATGG 100 0.0 45.0 2 ATTAGAC 20 7.032257E-4 45.0 33 CTCCGAC 25 3.889952E-5 45.0 17 ACGTTTC 20 7.032257E-4 45.0 22 TTTACGG 45 3.8380676E-10 45.0 2 ACGTTAG 25 3.889952E-5 45.0 1 GAGTCGG 45 3.8380676E-10 45.0 2 AGCCCGA 40 6.8121153E-9 45.0 45 CGCATCG 110 0.0 45.0 21 CGCATCA 25 3.889952E-5 45.0 30 GAATCGG 25 3.889952E-5 45.0 2 CGACCGT 20 7.032257E-4 45.0 20 CCTACGG 25 3.889952E-5 45.0 43 >>END_MODULE