##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547331_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2719797 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.34034267998678 31.0 31.0 33.0 30.0 34.0 2 31.760415575132996 31.0 31.0 34.0 30.0 34.0 3 31.858828434622144 31.0 31.0 34.0 30.0 34.0 4 35.64006173990191 37.0 35.0 37.0 33.0 37.0 5 35.52576828344174 37.0 35.0 37.0 33.0 37.0 6 35.56443734587545 37.0 35.0 37.0 33.0 37.0 7 35.94536651080945 37.0 35.0 37.0 35.0 37.0 8 35.92454730996468 37.0 35.0 37.0 35.0 37.0 9 37.62292626986499 39.0 37.0 39.0 35.0 39.0 10 36.98903668178176 39.0 37.0 39.0 33.0 39.0 11 36.72972026956423 39.0 37.0 39.0 32.0 39.0 12 36.48668154277691 39.0 35.0 39.0 32.0 39.0 13 36.37975554793244 39.0 35.0 39.0 32.0 39.0 14 37.488703017173705 40.0 36.0 41.0 32.0 41.0 15 37.593156033336314 40.0 36.0 41.0 32.0 41.0 16 37.639627883992816 40.0 36.0 41.0 32.0 41.0 17 37.53082123408475 39.0 36.0 41.0 32.0 41.0 18 37.395938373341835 39.0 36.0 41.0 32.0 41.0 19 37.357843986150435 39.0 36.0 41.0 32.0 41.0 20 37.20442371250501 39.0 35.0 41.0 32.0 41.0 21 37.096704276091195 39.0 35.0 41.0 31.0 41.0 22 37.04224543228778 39.0 35.0 41.0 31.0 41.0 23 36.94006207080896 39.0 35.0 41.0 31.0 41.0 24 36.81215142159507 39.0 35.0 41.0 31.0 41.0 25 36.73988205737413 38.0 35.0 40.0 31.0 41.0 26 36.64172436398746 38.0 35.0 40.0 31.0 41.0 27 36.54268609017511 38.0 35.0 40.0 30.0 41.0 28 36.61966058496277 39.0 35.0 40.0 30.0 41.0 29 36.60888992818214 39.0 35.0 41.0 30.0 41.0 30 36.54683823829499 39.0 35.0 41.0 30.0 41.0 31 36.44374414708157 39.0 35.0 41.0 30.0 41.0 32 36.331924404652256 39.0 35.0 41.0 30.0 41.0 33 36.116181465013746 38.0 35.0 41.0 29.0 41.0 34 35.892104079826545 38.0 35.0 41.0 28.0 41.0 35 35.72970997467826 38.0 35.0 40.0 27.0 41.0 36 35.614162748175694 38.0 35.0 40.0 27.0 41.0 37 35.533886904059386 38.0 35.0 40.0 26.0 41.0 38 35.437859884395785 38.0 34.0 40.0 26.0 41.0 39 35.3886323133675 38.0 34.0 40.0 26.0 41.0 40 35.24304019748533 38.0 34.0 40.0 25.0 41.0 41 35.15756249455382 38.0 34.0 40.0 25.0 41.0 42 35.101465660856306 38.0 34.0 40.0 24.0 41.0 43 35.05852569143947 38.0 34.0 40.0 24.0 41.0 44 34.93950467626812 38.0 34.0 40.0 24.0 41.0 45 34.8451752097675 38.0 34.0 40.0 24.0 41.0 46 34.77502916577965 38.0 34.0 40.0 24.0 41.0 47 34.63446646937253 38.0 33.0 40.0 23.0 41.0 48 34.57785967114457 38.0 33.0 40.0 23.0 41.0 49 34.458313249113814 37.0 33.0 40.0 24.0 41.0 50 34.39762011650134 37.0 33.0 40.0 23.0 41.0 51 33.95568198656002 37.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 3.0 11 4.0 12 17.0 13 13.0 14 39.0 15 92.0 16 207.0 17 615.0 18 1234.0 19 2398.0 20 4013.0 21 6359.0 22 9758.0 23 14371.0 24 21081.0 25 30348.0 26 41485.0 27 49399.0 28 53624.0 29 59295.0 30 68394.0 31 82475.0 32 100499.0 33 127172.0 34 185697.0 35 231056.0 36 221262.0 37 283286.0 38 423049.0 39 702333.0 40 217.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.20755188714452 22.883766692881856 28.37344110608255 15.535240313891075 2 32.53706067033679 25.534920437076735 28.773544496151736 13.154474396434734 3 28.5092232986506 25.67544563068494 32.62379508470669 13.191535985957776 4 25.77593107132628 27.676293488080177 31.6746433649276 14.87313207566594 5 23.148639402131852 31.94186919097271 30.574524495762002 14.33496691113344 6 21.663565332265605 40.92195116032557 27.42053910641125 9.993944400997574 7 87.8413719847474 3.136042873788007 7.54104074679103 1.4815443946735731 8 88.26353584477077 2.8200266416942146 7.3150312321103375 1.6014062814246797 9 82.94953630730528 6.142701091294681 8.519201984559876 2.388560616840154 10 34.93249680031267 41.95967566697074 14.05965224610513 9.048175286611464 11 27.158644560605072 24.429543822572054 30.688613892875093 17.72319772394778 12 27.305346685800448 22.393877190099115 32.16173854151615 18.13903758258429 13 24.392371930699237 24.341449012554982 31.884328131842192 19.38185092490359 14 19.239928568198287 28.324430095334318 32.29667508273595 20.138966253731436 15 19.016860449511487 29.02606334222738 34.547798971761495 17.409277236499634 16 24.53730921829828 27.31575187412884 32.013198043824595 16.133740863748287 17 23.35402237740537 27.683941117664297 29.42322533630267 19.53881116862766 18 23.025284607637996 28.289170110857537 31.107615752205035 17.57792952929943 19 24.20305633104235 29.51815889200554 28.64210086267468 17.636683914277427 20 25.814831033345502 29.022092457635623 28.692214896920614 16.470861612098258 21 25.80100647217421 26.351157825381822 31.185231838993865 16.662603863450105 22 24.200078167598537 23.74441916069471 32.066510846213895 19.988991825492857 23 21.62856271993829 26.52039839738039 32.44547295257698 19.405565930104345 24 21.3355629114967 26.799978086599847 32.92561908112995 18.938839920773496 25 21.54822584185511 29.23644669069052 30.103055485391007 19.112271982063366 26 21.37023461677471 30.50775480670065 28.259131104269912 19.86287947225473 27 19.68448380522517 30.12938097953634 31.306454121392147 18.879681093846344 28 19.015610356214086 29.856125291703755 32.0102566478307 19.118007704251458 29 20.394757402850285 27.983853206691528 32.095777736353114 19.52561165410507 30 21.232172842311392 27.226848180213448 31.386349790076245 20.15462918739891 31 22.58834023274531 27.964219388432298 29.706408235614646 19.741032143207747 32 23.378840406103837 28.413333789249712 29.167470954633746 19.040354850012704 33 22.697870466067872 27.676881767278953 29.342741388419796 20.282506378233375 34 21.049401848740917 28.057498408888605 31.020954872734986 19.87214486963549 35 20.878837648545094 28.568639497727222 30.708247711134323 19.84427514259336 36 22.671949413871697 28.82803385693859 28.63437969819071 19.865637030999007 37 21.55760154158564 29.80490823396011 28.99429626549334 19.643193958960907 38 21.97730198246413 29.878553436157183 28.01911319116831 20.12503139021037 39 21.47391882555941 28.238614867212515 29.142505856135585 21.14496045109249 40 22.335490479620354 27.745048619437405 29.82957919285888 20.08988170808336 41 20.17161574926364 28.082206135237296 30.043896658463847 21.702281457035212 42 21.316664442235947 28.827224973040266 28.29519997264502 21.560910612078768 43 21.231878702712002 27.835349476449895 29.447418318352437 21.485353502485662 44 21.22592237582437 28.758837516182272 29.1319535980075 20.883286509985854 45 20.80964130778878 29.095075845734076 28.63599746598735 21.459285380489792 46 21.32081916407732 29.01109899010845 28.529224791409064 21.138857054405165 47 20.93064298548752 28.71148104068061 29.639381174403823 20.718494799428044 48 21.142975008796615 27.99392748797061 29.894694346673667 20.96840315655911 49 21.418657348324157 27.509884009725727 29.642322570397717 21.4291360715524 50 20.434208876618364 29.028747366071805 29.687031789504882 20.85001196780495 51 19.875784847177933 28.51359862519151 29.651073223479546 21.95954330415101 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2717.0 1 3473.5 2 4230.0 3 21485.0 4 38740.0 5 26906.5 6 15073.0 7 15210.0 8 15347.0 9 15859.5 10 16372.0 11 16851.5 12 17331.0 13 16577.5 14 15824.0 15 14867.5 16 13911.0 17 13973.5 18 14036.0 19 13689.5 20 13343.0 21 14905.0 22 16467.0 23 17294.0 24 18121.0 25 22608.5 26 34073.5 27 41051.0 28 46680.0 29 52309.0 30 58453.5 31 64598.0 32 75095.0 33 85592.0 34 98441.5 35 111291.0 36 117035.0 37 122779.0 38 131522.0 39 140265.0 40 150754.5 41 161244.0 42 171120.0 43 180996.0 44 185939.0 45 190882.0 46 195239.5 47 199597.0 48 196615.0 49 193633.0 50 184294.5 51 174956.0 52 165327.5 53 155699.0 54 144243.0 55 132787.0 56 123709.5 57 114632.0 58 109817.0 59 105002.0 60 94431.0 61 83860.0 62 72462.0 63 61064.0 64 52414.5 65 43765.0 66 35644.5 67 27524.0 68 23200.0 69 18876.0 70 15087.5 71 11299.0 72 9709.5 73 8120.0 74 6316.5 75 3564.5 76 2616.0 77 1892.5 78 1169.0 79 875.0 80 581.0 81 418.0 82 255.0 83 184.5 84 114.0 85 85.5 86 57.0 87 49.0 88 41.0 89 24.5 90 8.0 91 7.0 92 6.0 93 6.5 94 7.0 95 4.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2719797.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.030742311736077 #Duplication Level Percentage of deduplicated Percentage of total 1 80.98698853877923 16.222294980238104 2 6.199658113957994 2.4836750820311253 3 2.096774643095887 1.2599985768490831 4 1.1324753125666105 0.9073728464169819 5 0.7281657076128522 0.7292849824718 6 0.5613088620617286 0.6746059903951378 7 0.4166977049452449 0.5842735044755023 8 0.3368920667632441 0.5398558540962184 9 0.2888496181739155 0.5207285041636555 >10 4.295889770909103 21.681953221337043 >50 2.0634951659085043 29.848965095993368 >100 0.8898383783920758 23.17138266083413 >500 0.0018538230210806356 0.24552637951180187 >1k 9.269115105403178E-4 0.25822601983137783 >5k 0.0 0.0 >10k+ 1.8538230210806355E-4 0.8718563013547485 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 23479 0.8632629567574345 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.1030234977095717E-4 0.0 0.0 0.020700074307016297 0.0 2 1.1030234977095717E-4 0.0 0.0 0.056217430933264506 0.0 3 1.4706979969460955E-4 0.0 0.0 0.0907420664115741 0.0 4 1.4706979969460955E-4 0.0 0.0 0.1590192209197966 0.0 5 1.4706979969460955E-4 0.0 0.0 0.3043609504679945 0.0 6 1.4706979969460955E-4 0.0 0.0 0.5549678891476092 0.0 7 1.4706979969460955E-4 0.0 0.0 0.6894264535184059 0.0 8 1.4706979969460955E-4 0.0 0.0 0.9287090176215357 0.0 9 1.4706979969460955E-4 0.0 0.0 1.0458133456283687 0.0 10 1.4706979969460955E-4 0.0 0.0 1.2186571277194584 0.0 11 1.4706979969460955E-4 0.0 0.0 1.3987808648954316 0.0 12 1.4706979969460955E-4 0.0 0.0 1.5509245726795051 0.0 13 1.4706979969460955E-4 0.0 0.0 1.6205988902848265 0.0 14 1.4706979969460955E-4 0.0 0.0 1.665491946641606 0.0 15 1.4706979969460955E-4 0.0 0.0 1.7064508858565548 0.0 16 1.4706979969460955E-4 0.0 0.0 1.7762722732615706 0.0 17 1.4706979969460955E-4 0.0 0.0 1.863705269180016 0.0 18 1.4706979969460955E-4 0.0 0.0 1.9626832443744882 0.0 19 1.4706979969460955E-4 0.0 0.0 2.035151888174007 0.0 20 1.4706979969460955E-4 0.0 0.0 2.1185404646008505 0.0 21 1.4706979969460955E-4 0.0 0.0 2.2152388579000566 0.0 22 1.4706979969460955E-4 0.0 0.0 2.3303209761610884 0.0 23 1.4706979969460955E-4 0.0 0.0 2.449594583713417 0.0 24 1.4706979969460955E-4 0.0 0.0 2.543756022967891 0.0 25 1.4706979969460955E-4 0.0 0.0 2.627475506444047 0.0 26 1.4706979969460955E-4 0.0 0.0 2.7053857328322666 0.0 27 1.4706979969460955E-4 0.0 0.0 2.788075727710561 0.0 28 1.8383724961826194E-4 0.0 0.0 2.879222236071295 0.0 29 1.8383724961826194E-4 0.0 0.0 2.9835682589546204 0.0 30 1.8383724961826194E-4 0.0 0.0 3.1131735199354953 0.0 31 2.2060469954191434E-4 0.0 0.0 3.2235494046063 0.0 32 2.2060469954191434E-4 0.0 0.0 3.3355430570737448 0.0 33 2.2060469954191434E-4 0.0 0.0 3.4494853843871436 0.0 34 2.2060469954191434E-4 0.0 0.0 3.5626555952521457 0.0 35 2.2060469954191434E-4 0.0 0.0 3.685642715246763 0.0 36 2.2060469954191434E-4 0.0 0.0 3.809181346990235 0.0 37 2.2060469954191434E-4 0.0 0.0 3.9332714904825616 0.0 38 2.2060469954191434E-4 0.0 0.0 4.071002357896564 0.0 39 2.2060469954191434E-4 0.0 0.0 4.288187684595578 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAAACG 20 7.0349884E-4 45.0 9 CGTTTTT 12910 0.0 42.978313 1 CGACGGT 305 0.0 39.836067 28 TACGGGA 1230 0.0 39.32927 4 GGGCGAT 2870 0.0 38.885017 7 TAGGGAC 3920 0.0 38.686226 5 AGGGATT 6475 0.0 38.18919 6 TAGGGAT 5315 0.0 37.97272 5 ATAGGGA 4635 0.0 37.961166 4 CGAATAT 155 0.0 37.741936 14 ACGGGAT 1810 0.0 37.54144 5 AGGGCGA 1445 0.0 37.52595 6 TAAGGGA 4655 0.0 37.26638 4 ACGGGAC 1070 0.0 37.219627 5 TTAGGGA 4715 0.0 37.03075 4 TCACGAC 335 0.0 36.9403 25 GTACGGG 865 0.0 36.936417 3 GTAGGGA 4760 0.0 36.869747 4 AGGGACC 3520 0.0 36.81818 6 CGGGATC 1250 0.0 36.72 6 >>END_MODULE