SRR1547328_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547328_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	32002
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	206	0.6437097681394913	No Hit
TGACTTGGGGTATATGAGTTCATATGCAGTGAGCTCATGAGTACCACAGCT	159	0.49684394725329667	No Hit
AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	64	0.19998750078120117	No Hit
AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	43	0.13436660208736956	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	40	0.12499218798825074	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAGGGAT	45	3.601599E-10	45.000004	5
GGATGTA	25	3.80617E-5	45.0	8
TAGCGGG	20	6.9308653E-4	45.0	3
GCGGGAC	20	6.9308653E-4	45.0	5
ATGGGAT	40	6.4646883E-9	45.0	5
GTATGGG	20	6.9308653E-4	45.0	3
CAATGGG	25	3.80617E-5	45.0	3
GGGTATA	20	6.9308653E-4	45.0	8
TATGAGT	20	6.9308653E-4	45.0	13
GTGAGCT	20	6.9308653E-4	45.0	29
TTGGGAT	35	1.16318915E-7	45.0	5
ACGGGGG	20	6.9308653E-4	45.0	5
ACGGGAT	20	6.9308653E-4	45.0	5
AGTGAGC	20	6.9308653E-4	45.0	28
GGGATAT	25	3.80617E-5	45.0	7
ACTAGGG	20	6.9308653E-4	45.0	3
GGGAATA	20	6.9308653E-4	45.0	7
AACAGGG	25	3.80617E-5	45.0	3
TGAGCTC	20	6.9308653E-4	45.0	30
GGTATAT	20	6.9308653E-4	45.0	9