##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547327_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 448606 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.294813265983958 31.0 31.0 33.0 30.0 34.0 2 31.718804474304847 31.0 31.0 34.0 30.0 34.0 3 31.762941200073115 31.0 31.0 34.0 30.0 34.0 4 35.57902480127328 37.0 35.0 37.0 33.0 37.0 5 35.486598485084905 37.0 35.0 37.0 33.0 37.0 6 35.52254762531041 37.0 35.0 37.0 33.0 37.0 7 35.899615698407956 37.0 35.0 37.0 35.0 37.0 8 35.87597134233604 37.0 35.0 37.0 35.0 37.0 9 37.569428407110024 39.0 37.0 39.0 35.0 39.0 10 36.95349816988627 39.0 37.0 39.0 32.0 39.0 11 36.7089472722166 39.0 37.0 39.0 32.0 39.0 12 36.456199872493904 39.0 35.0 39.0 32.0 39.0 13 36.37319607851879 39.0 35.0 39.0 32.0 39.0 14 37.4822204785491 40.0 36.0 41.0 32.0 41.0 15 37.58983606995894 40.0 36.0 41.0 32.0 41.0 16 37.611068510006554 40.0 36.0 41.0 32.0 41.0 17 37.51288881557536 39.0 36.0 41.0 32.0 41.0 18 37.351468772151954 39.0 36.0 41.0 32.0 41.0 19 37.252404114077834 39.0 36.0 41.0 32.0 41.0 20 37.05086423275658 39.0 35.0 41.0 32.0 41.0 21 36.92376160818179 39.0 35.0 41.0 31.0 41.0 22 36.85064176582569 39.0 35.0 41.0 31.0 41.0 23 36.76280076503658 38.0 35.0 40.0 31.0 41.0 24 36.62848245453694 38.0 35.0 40.0 31.0 41.0 25 36.540527768242065 38.0 35.0 40.0 31.0 41.0 26 36.41221472739999 38.0 35.0 40.0 30.0 41.0 27 36.32938703450244 38.0 35.0 40.0 30.0 41.0 28 36.36576193809267 38.0 35.0 40.0 30.0 41.0 29 36.351040779659655 38.0 35.0 40.0 30.0 41.0 30 36.26285426409812 38.0 35.0 40.0 30.0 41.0 31 36.12498272426138 38.0 35.0 40.0 30.0 41.0 32 35.967989728180186 38.0 35.0 40.0 29.0 41.0 33 35.69704373102455 38.0 35.0 40.0 27.0 41.0 34 35.390964454331865 38.0 34.0 40.0 25.0 41.0 35 35.159193144986915 38.0 34.0 40.0 24.0 41.0 36 34.995967508236625 38.0 34.0 40.0 24.0 41.0 37 34.8787332313879 38.0 34.0 40.0 23.0 41.0 38 34.774940593750415 38.0 34.0 40.0 23.0 41.0 39 34.7204629452125 38.0 34.0 40.0 23.0 41.0 40 34.541914285586905 38.0 33.0 40.0 23.0 41.0 41 34.452940887995254 38.0 33.0 40.0 22.0 41.0 42 34.390587731773536 38.0 33.0 40.0 22.0 41.0 43 34.3181834393655 38.0 33.0 40.0 22.0 41.0 44 34.19612087221304 37.0 33.0 40.0 21.0 41.0 45 34.085308711876344 37.0 33.0 40.0 21.0 41.0 46 34.00361118665377 37.0 33.0 40.0 21.0 41.0 47 33.86135495289854 37.0 33.0 40.0 20.0 41.0 48 33.800381626638966 37.0 33.0 40.0 20.0 41.0 49 33.67997307213903 37.0 33.0 40.0 20.0 41.0 50 33.6202123912743 36.0 33.0 40.0 20.0 41.0 51 33.183847295845354 36.0 32.0 40.0 19.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 1.0 13 2.0 14 9.0 15 18.0 16 44.0 17 148.0 18 253.0 19 510.0 20 817.0 21 1282.0 22 2023.0 23 2917.0 24 4217.0 25 6280.0 26 8437.0 27 10139.0 28 10631.0 29 10943.0 30 12356.0 31 14315.0 32 16897.0 33 21375.0 34 30571.0 35 37621.0 36 37063.0 37 46172.0 38 67188.0 39 106344.0 40 32.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.53992590379977 23.394693784746526 27.06651270825624 17.99886760319746 2 34.66850643994953 24.849868258560964 27.878360967084703 12.603264334404802 3 28.35026727239493 25.16060864099009 33.68590700971454 12.803217076900442 4 25.155258734836362 27.357413855365287 33.13330628658556 14.354021123212796 5 22.66799819886493 30.996241690927008 32.321458027757096 14.01430208245097 6 21.033378956144144 39.56099561753521 29.64806534018716 9.75756008613349 7 85.5262747265975 3.1653611409566524 9.917165619719755 1.3911985127260893 8 85.98569791754903 2.7083899903255864 9.893536867540782 1.412375224584602 9 80.89281017195489 5.780796511861188 10.98246568258115 2.343927633602761 10 33.933117256568124 38.92658591280544 17.078683744755978 10.061613085870452 11 27.71429717837033 24.154603371332527 30.929367864005386 17.201731586291757 12 26.105758728148977 22.347449655153966 33.450956964463245 18.09583465223381 13 23.56410747961463 24.054961369219317 33.703962942983374 18.676968208182682 14 19.391849417974793 27.708947272216598 33.48818339478295 19.41101991502566 15 19.518686776369464 27.406900487287285 35.78106400716887 17.293348729174376 16 24.01550581133556 26.44168825205191 33.390770520233794 16.152035416378737 17 22.89224843180876 26.02283518276617 31.820573064114164 19.264343321310907 18 22.864830162770893 27.029286277936542 32.290918980129554 17.814964579163007 19 23.94528829306786 28.007650365799837 30.42045804113186 17.626603300000447 20 25.558507911173724 27.97153849926216 30.1783747876756 16.29157880188852 21 25.665060208735508 25.50545467514924 32.744323526658135 16.085161589457115 22 23.7651747858923 22.89603794866765 33.69950468785527 19.639282577584787 23 21.52601614780007 26.111554459815515 33.02296447216489 19.339464920219523 24 20.612296759294345 27.208062308573673 33.67498428465067 18.504656647481312 25 22.103806012402867 28.233015162525692 31.05977182650254 18.6034069985689 26 21.14193746851357 29.712041301275505 29.58721015768848 19.558811072522435 27 19.77815722482535 28.377462628676387 32.83281989095108 19.011560255547185 28 19.211735910799234 27.93654119650651 33.97836854611842 18.873354346575837 29 20.283946269109197 27.277611088572158 33.355104479208926 19.083338163109723 30 21.258743752870004 26.378158116476374 33.529868080230756 18.833230050422866 31 22.678252185659574 27.12045759530635 31.3056445968177 18.895645622216378 32 23.07682019411243 27.264459235944237 31.11906661970638 18.539653950236957 33 22.43772932149815 27.247072040944616 30.253719299340627 20.06147933821661 34 20.703468076664155 28.33354881566453 31.317013147394373 19.645969960276947 35 20.891829355826715 28.138500153809805 30.97729410663255 19.992376383730935 36 22.944632929564026 28.90264508276751 29.457920758973355 18.694801228695113 37 21.648841076579448 29.5796311239707 29.164344658787446 19.607183140662407 38 21.80242796574277 30.109271833189926 28.169930852462965 19.918369348604344 39 21.464046401519372 28.70804224642559 28.272024894896635 21.555886457158397 40 22.140586617209756 28.163466382527208 29.74191161063383 19.954035389629208 41 20.62856939051194 27.941222364391027 29.77066735621013 21.65954088888691 42 21.329852922163322 29.036615649367153 28.81949862462829 20.814032803841233 43 21.176043120243598 28.3571775678435 29.22408527750409 21.242694034408814 44 21.127448139347223 28.66658047373419 29.488905632113706 20.717065754804885 45 21.383129070944214 28.87299768616559 28.69266126623362 21.051211976656575 46 21.79618640856342 28.699794474438594 28.90153051898548 20.60248859801251 47 21.310905337868867 28.473538026687116 29.902408795245716 20.313147840198305 48 21.343227687547646 28.470863073610253 29.834420404542072 20.35148883430003 49 21.296416008702515 28.012777359197155 30.36205489895365 20.32875173314668 50 20.252515570456033 28.779151415718918 30.50382741202748 20.46450560179757 51 20.32652260558263 29.02792205186734 29.657427675956182 20.988127666593847 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 577.0 1 700.0 2 823.0 3 5255.5 4 9688.0 5 6770.5 6 3853.0 7 3826.0 8 3799.0 9 3868.0 10 3937.0 11 3980.5 12 4024.0 13 3964.5 14 3905.0 15 3663.0 16 3421.0 17 3171.5 18 2922.0 19 2902.0 20 2882.0 21 2978.5 22 3075.0 23 3218.5 24 3362.0 25 3993.5 26 5320.0 27 6015.0 28 7040.0 29 8065.0 30 9080.5 31 10096.0 32 11252.0 33 12408.0 34 13803.5 35 15199.0 36 16681.5 37 18164.0 38 19888.0 39 21612.0 40 22635.5 41 23659.0 42 25714.0 43 27769.0 44 28902.5 45 30036.0 46 30698.5 47 31361.0 48 31225.0 49 31089.0 50 30169.0 51 29249.0 52 27460.0 53 25671.0 54 23685.5 55 21700.0 56 21017.5 57 20335.0 58 18727.0 59 17119.0 60 15463.0 61 13807.0 62 12171.0 63 10535.0 64 9256.5 65 7978.0 66 6752.0 67 5526.0 68 4625.5 69 3725.0 70 3257.5 71 2790.0 72 2291.0 73 1792.0 74 1333.0 75 738.5 76 603.0 77 457.0 78 311.0 79 219.5 80 128.0 81 84.0 82 40.0 83 34.5 84 29.0 85 22.0 86 15.0 87 10.5 88 6.0 89 4.0 90 2.0 91 2.5 92 3.0 93 2.0 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 448606.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.46358232843341 #Duplication Level Percentage of deduplicated Percentage of total 1 70.8241250567642 24.40853064733057 2 6.860971377071194 4.7290730381343655 3 3.77217544013697 3.9000803651536504 4 2.730981155766666 3.7647757559665886 5 2.175461817109799 3.748710371816345 6 1.7798322838605705 3.6803637867379453 7 1.5411750522746441 3.7180089307616404 8 1.3753009054280256 3.7918236784470225 9 1.1268516266489428 3.495180942625046 >10 7.772250672989796 42.03932294254126 >50 0.030493758120865237 0.7466033436494518 >100 0.009732050464105926 0.6014863714935685 >500 0.0 0.0 >1k 0.0 0.0 >5k 6.488033642737284E-4 1.3760398253425354 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6154 1.3718051029188196 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.014489329166350873 0.0 2 0.0 0.0 0.0 0.04458255128107961 0.0 3 0.0 0.0 0.0 0.08604432397248366 0.0 4 0.0 0.0 0.0 0.13998921102259 0.0 5 0.0 0.0 0.0 0.25478928057136996 0.0 6 0.0 0.0 0.0 0.5046744805018212 0.0 7 0.0 0.0 0.0 0.6502365104345461 0.0 8 0.0 0.0 0.0 0.856207897353134 0.0 9 0.0 0.0 0.0 0.9955283701065077 0.0 10 0.0 0.0 0.0 1.141313312795638 0.0 11 0.0 0.0 0.0 1.2993584570870653 0.0 12 0.0 0.0 0.0 1.4221833858664397 0.0 13 0.0 0.0 0.0 1.4950758572110048 0.0 14 0.0 0.0 0.0 1.5369834554152195 0.0 15 0.0 0.0 0.0 1.5650704627222998 0.0 16 0.0 0.0 0.0 1.615002920157109 0.0 17 0.0 0.0 0.0 1.669393632720026 0.0 18 0.0 0.0 0.0 1.7465214464362937 0.0 19 0.0 0.0 0.0 1.8020267227812379 0.0 20 0.0 0.0 0.0 1.859761126690236 0.0 21 0.0 0.0 0.0 1.9270807791246662 0.0 22 0.0 0.0 0.0 2.006660633161393 0.0 23 0.0 0.0 0.0 2.088246702005769 0.0 24 0.0 0.0 0.0 2.157795482004253 0.0 25 0.0 0.0 0.0 2.2271213492463318 0.0 26 0.0 0.0 0.0 2.287084880719384 0.0 27 0.0 0.0 0.0 2.353067056615382 0.0 28 0.0 0.0 0.0 2.4152597156524878 0.0 29 0.0 0.0 0.0 2.5013040396249715 0.0 30 0.0 0.0 0.0 2.5871254508410497 0.0 31 0.0 0.0 0.0 2.66559074109575 0.0 32 0.0 0.0 0.0 2.7467309844273147 0.0 33 0.0 0.0 0.0 2.826979576733258 0.0 34 0.0 0.0 0.0 2.9139155517313635 0.0 35 0.0 0.0 0.0 3.0131117283317654 0.0 36 0.0 0.0 0.0 3.1004935288426814 0.0 37 0.0 0.0 0.0 3.2037021350583808 0.0 38 0.0 0.0 0.0 3.3320998827478903 0.0 39 0.0 0.0 0.0 3.5478794309483153 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGTAG 20 7.028682E-4 45.000004 1 CGAAAGG 40 6.7993824E-9 45.000004 2 TACGGCG 30 2.162531E-6 45.000004 15 TAACGCC 35 1.2097189E-7 45.000004 12 AATCGAG 20 7.028682E-4 45.000004 1 GTACCGG 25 3.8869897E-5 45.0 2 CGTTTTT 3215 0.0 43.390358 1 GGCGATA 85 0.0 42.352943 8 GCGAGAC 75 0.0 42.000004 21 TTAACGG 65 0.0 41.538464 2 TCGGGAT 55 6.002665E-11 40.909092 5 CCGTTAC 45 1.9237632E-8 40.000004 45 ACGGGAT 220 0.0 39.886364 5 TACGGGA 175 0.0 39.857143 4 GGGCGAT 385 0.0 39.740257 7 ACACGGG 85 0.0 39.705883 3 GTTAACG 40 3.4519326E-7 39.375004 1 ATGGTCG 40 3.4519326E-7 39.375004 44 ATAGGGA 705 0.0 38.936172 4 TATGGGA 580 0.0 38.793102 4 >>END_MODULE