##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547325_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3862931 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.365567233792163 31.0 31.0 33.0 30.0 34.0 2 31.76709239693901 31.0 31.0 34.0 30.0 34.0 3 31.71799832821244 31.0 31.0 34.0 30.0 34.0 4 35.57517568913346 37.0 35.0 37.0 33.0 37.0 5 35.50888923462521 37.0 35.0 37.0 33.0 37.0 6 35.56310117887169 37.0 35.0 37.0 33.0 37.0 7 35.95925192554565 37.0 35.0 37.0 35.0 37.0 8 35.947104413721085 37.0 35.0 37.0 35.0 37.0 9 37.671738376895675 39.0 37.0 39.0 35.0 39.0 10 37.01664073212801 39.0 37.0 39.0 33.0 39.0 11 36.78495111613435 39.0 37.0 39.0 32.0 39.0 12 36.534564298456274 39.0 35.0 39.0 32.0 39.0 13 36.432683110311835 39.0 35.0 39.0 32.0 39.0 14 37.57924695004907 40.0 36.0 41.0 32.0 41.0 15 37.666616100572334 40.0 36.0 41.0 32.0 41.0 16 37.70027396295714 40.0 36.0 41.0 32.0 41.0 17 37.59889343092072 40.0 36.0 41.0 32.0 41.0 18 37.35700145821916 39.0 36.0 41.0 32.0 41.0 19 37.18807299431442 38.0 36.0 41.0 32.0 41.0 20 36.923138155975344 38.0 35.0 41.0 32.0 41.0 21 36.80973540557675 38.0 35.0 40.0 31.0 41.0 22 36.72687914953697 38.0 35.0 40.0 31.0 41.0 23 36.64558259000743 38.0 35.0 40.0 31.0 41.0 24 36.49408208430334 38.0 35.0 40.0 31.0 41.0 25 36.400346524439605 38.0 35.0 40.0 31.0 41.0 26 36.259886599061694 38.0 35.0 40.0 30.0 41.0 27 36.15456294715075 38.0 35.0 40.0 30.0 41.0 28 36.17392259918699 38.0 35.0 40.0 30.0 41.0 29 36.12711668937395 38.0 35.0 40.0 30.0 41.0 30 36.0171499309721 38.0 35.0 40.0 30.0 41.0 31 35.824548251056 38.0 35.0 40.0 29.0 41.0 32 35.57951850550786 38.0 35.0 40.0 28.0 41.0 33 35.19261384684324 38.0 34.0 40.0 25.0 41.0 34 34.74629419992229 38.0 34.0 40.0 23.0 41.0 35 34.43595756693557 38.0 33.0 40.0 21.0 41.0 36 34.23610491618929 38.0 33.0 40.0 20.0 41.0 37 34.124854676410216 38.0 33.0 40.0 20.0 41.0 38 34.010800865974566 38.0 33.0 40.0 18.0 41.0 39 33.95017047935881 37.0 33.0 40.0 18.0 41.0 40 33.795948982780175 37.0 33.0 40.0 18.0 41.0 41 33.707498011225155 37.0 33.0 40.0 18.0 41.0 42 33.61977912626449 37.0 33.0 40.0 18.0 41.0 43 33.559371109657405 37.0 33.0 40.0 18.0 41.0 44 33.421854804033515 37.0 33.0 40.0 17.0 41.0 45 33.31124941139254 36.0 33.0 40.0 17.0 41.0 46 33.225917056245635 36.0 32.0 40.0 17.0 41.0 47 33.09549277478681 36.0 32.0 40.0 17.0 41.0 48 33.00706613708606 36.0 32.0 40.0 15.0 41.0 49 32.886377986042206 36.0 32.0 40.0 15.0 41.0 50 32.80825932433171 35.0 31.0 40.0 15.0 41.0 51 32.39206395351095 35.0 31.0 39.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 1.0 10 3.0 11 10.0 12 9.0 13 34.0 14 63.0 15 200.0 16 497.0 17 1042.0 18 2356.0 19 4501.0 20 7770.0 21 12433.0 22 19280.0 23 28880.0 24 43692.0 25 67016.0 26 93423.0 27 103923.0 28 101847.0 29 99937.0 30 107172.0 31 122848.0 32 146532.0 33 183531.0 34 268929.0 35 354382.0 36 329302.0 37 381956.0 38 539631.0 39 841469.0 40 260.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.284361796780736 22.033839071937862 26.57337135972659 21.108427771554812 2 37.30346206028531 23.82509550390623 26.81761595016841 12.053826485640048 3 26.759421796558108 23.105408820400882 37.58604541473819 12.549123968302824 4 24.11945747930781 25.624920559026293 36.638837193830284 13.616784767835616 5 21.2190432601566 29.63889336879173 35.91128083830646 13.230782532745215 6 19.610937912170836 37.93849799543404 32.91130491328993 9.539259179105192 7 80.69691123139398 3.348105363518013 14.327229764135058 1.6277536409529447 8 81.1859699280158 2.8647418242779903 14.1280028040884 1.8212854436178125 9 76.4939109707111 5.489329216597449 15.393906854665538 2.6228529580259137 10 34.94892867617879 30.26895898477089 22.84022158304148 11.941890756008844 11 27.34291655740162 24.69536732600194 31.213112530355836 16.748603586240606 12 25.888114491302073 21.686745116596697 34.74092599634837 17.68421439575286 13 22.05532534751462 24.335355718235714 35.68197309245234 17.92734584179733 14 18.653607843370747 28.189320492651827 35.58150533882174 17.57556632515569 15 18.185828325693628 27.219305755137746 37.87139868664494 16.7234672325237 16 21.30449650796248 25.228977685596764 37.00568299045466 16.460842815986098 17 21.32844205604501 25.395017410354985 33.60378427675773 19.672756256842277 18 21.041613220634797 27.762856753071695 34.48117504558068 16.71435498071283 19 22.97840681078694 28.670975484677307 31.547004075402846 16.803613629132904 20 23.276729509276763 27.66932673661528 32.40127768267153 16.652666071436432 21 23.667909160168794 26.316312665175744 33.95494250350317 16.060835671152294 22 22.168193011990116 24.40266212365688 33.93143703576378 19.497707828589224 23 20.43010864030447 26.872807202613767 33.883494165440695 18.81358999164106 24 20.238570142723233 27.356766144670974 35.12011992965963 17.284543782946162 25 21.07135747441515 28.00565166708906 33.06792174128919 17.855069117206597 26 19.450179151530275 29.49788644943438 32.1048706280283 18.94706377100704 27 18.40586849726283 29.274066764329987 34.49595656769432 17.82410817071286 28 18.048109065370312 28.998291711656254 35.429729394597004 17.52386982837643 29 19.0410597548856 27.5046849141235 34.963891407845495 18.490363923145402 30 19.51015951359214 27.532332314504192 35.27937723971772 17.678130932185947 31 21.499426212893784 27.77802658137047 32.584635863286195 18.137911342449556 32 21.834845095602276 28.416117191842154 32.443214750664715 17.305822961890854 33 21.318164885678776 28.13350795031027 31.16038055041625 19.387946613594703 34 20.060622361621267 29.105412444591945 32.23381416856786 18.600151025218935 35 20.268573267293668 28.7682332405109 31.559947614906918 19.403245877288512 36 22.42983371952541 30.067039768507385 29.516991113742392 17.98613539822482 37 20.32386806805506 31.131102264058043 29.930640749213488 18.61438891867341 38 20.53407114960117 31.53641626008852 28.67431491786936 19.255197672440953 39 20.336216204741945 29.95375791076776 28.986047123285402 20.723978761204897 40 21.172990146601116 28.798495235871414 30.14829930951394 19.880215308013526 41 19.25077098193056 28.256135043571838 31.05867021699326 21.43442375750434 42 20.101368623980083 29.99662691360524 29.25452201967884 20.64748244273584 43 19.774932557687414 29.053353528706573 30.08117411364583 21.090539799960187 44 19.70198276904247 29.786501493296154 29.819818163979633 20.691697573681747 45 19.98829386287252 30.458012322767345 29.1936614969307 20.360032317429432 46 20.7519626936127 30.393294625246998 29.285379417856543 19.56936326328376 47 20.44571854894638 29.584375180400578 29.882982636759497 20.086923633893537 48 19.988371524109542 29.8200511476907 30.357026827556588 19.834550500643164 49 20.223607411056527 28.946569327797985 30.330207813704153 20.499615447441332 50 19.513964914206337 29.21359454776697 31.01220291017365 20.260237627853048 51 18.764326880288568 30.163184379943626 30.409551710864108 20.6629370289037 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 6972.0 1 7773.5 2 8575.0 3 71226.0 4 133877.0 5 89118.5 6 44360.0 7 44842.5 8 45325.0 9 48467.0 10 51609.0 11 52785.0 12 53961.0 13 52790.0 14 51619.0 15 49823.5 16 48028.0 17 43548.5 18 39069.0 19 36234.0 20 33399.0 21 33737.5 22 34076.0 23 33679.0 24 33282.0 25 36303.5 26 44816.0 27 50307.0 28 57857.0 29 65407.0 30 70896.0 31 76385.0 32 87656.5 33 98928.0 34 108062.5 35 117197.0 36 126758.5 37 136320.0 38 149754.0 39 163188.0 40 176333.0 41 189478.0 42 210173.0 43 230868.0 44 255003.0 45 279138.0 46 276162.0 47 273186.0 48 268633.5 49 264081.0 50 243266.0 51 222451.0 52 208950.0 53 195449.0 54 184333.5 55 173218.0 56 165407.0 57 157596.0 58 148264.0 59 138932.0 60 129599.5 61 120267.0 62 110500.0 63 100733.0 64 83257.5 65 65782.0 66 54161.5 67 42541.0 68 34917.0 69 27293.0 70 23317.5 71 19342.0 72 15997.0 73 12652.0 74 10620.5 75 6723.0 76 4857.0 77 3711.5 78 2566.0 79 1884.5 80 1203.0 81 949.5 82 696.0 83 585.0 84 474.0 85 325.0 86 176.0 87 119.5 88 63.0 89 56.5 90 50.0 91 36.0 92 22.0 93 16.5 94 11.0 95 8.5 96 6.0 97 3.5 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3862931.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.371303623038354 #Duplication Level Percentage of deduplicated Percentage of total 1 80.55083536597975 18.825780304276883 2 7.273982634383117 3.4000491339375243 3 2.680926819801461 1.8797026409017974 4 1.4458250591481516 1.3516326577259536 5 0.9582256582755395 1.1197491399471715 6 0.7172827267722788 1.0058299434573474 7 0.5553584255963063 0.9085615268956682 8 0.4423546373585315 0.8270723631012212 9 0.36679295101198484 0.7715186482402198 >10 3.2591859383799235 16.58751678984386 >50 0.8784806467616915 14.84273409986591 >100 0.8617295182391593 33.57445217122172 >500 0.005186280517902306 0.8070223598758592 >1k 0.0034951020881515324 1.337817358319687 >5k 2.2549045730009887E-4 0.29338123077212186 >10k+ 1.1274522865004943E-4 2.467179631617077 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 93631 2.42383309461132 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 5760 0.14910957508689646 No Hit AGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT 5374 0.13911716258975373 No Hit GAGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT 4002 0.10360009019058326 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.0354831603256698E-4 0.0 0.0 0.03536174992512162 0.0 2 1.0354831603256698E-4 0.0 0.0 0.0912778405827078 0.0 3 1.0354831603256698E-4 0.0 0.0 0.15159473467167806 0.0 4 1.0354831603256698E-4 0.0 0.0 0.25405579338590306 0.0 5 1.0354831603256698E-4 0.0 0.0 0.4860816825358775 0.0 6 1.0354831603256698E-4 0.0 0.0 0.958805632303554 0.0 7 1.0354831603256698E-4 0.0 0.0 1.2669654208164733 0.0 8 1.0354831603256698E-4 0.0 0.0 1.6580674104714788 0.0 9 1.0354831603256698E-4 0.0 0.0 1.8778745983296103 0.0 10 1.0354831603256698E-4 0.0 0.0 2.1508797335494734 0.0 11 1.0354831603256698E-4 0.0 0.0 2.4391582453841396 0.0 12 1.0354831603256698E-4 0.0 0.0 2.6595349489804505 0.0 13 1.0354831603256698E-4 0.0 0.0 2.7919473581070955 0.0 14 1.0354831603256698E-4 0.0 0.0 2.863473357406591 0.0 15 1.0354831603256698E-4 0.0 0.0 2.9268967009765383 0.0 16 1.0354831603256698E-4 0.0 0.0 3.0326971928828135 0.0 17 1.0354831603256698E-4 0.0 0.0 3.15226961082142 0.0 18 1.0354831603256698E-4 0.0 0.0 3.303812571335082 0.0 19 1.2943539504070873E-4 0.0 0.0 3.4017692783018902 0.0 20 1.2943539504070873E-4 0.0 0.0 3.502133483616456 0.0 21 1.2943539504070873E-4 0.0 0.0 3.6304557342598147 0.0 22 1.2943539504070873E-4 0.0 0.0 3.7750350705202864 0.0 23 1.2943539504070873E-4 0.0 0.0 3.937321168822327 0.0 24 1.2943539504070873E-4 0.0 0.0 4.069863013344013 0.0 25 1.2943539504070873E-4 0.0 0.0 4.193007848185743 0.0 26 1.2943539504070873E-4 0.0 0.0 4.309422042485356 0.0 27 1.2943539504070873E-4 0.0 0.0 4.43349881217138 0.0 28 1.2943539504070873E-4 0.0 0.0 4.569509525280156 0.0 29 1.2943539504070873E-4 0.0 0.0 4.70779830134165 0.0 30 1.2943539504070873E-4 0.0 0.0 4.867728675453949 0.0 31 1.2943539504070873E-4 0.0 0.0 5.019323410125628 0.0 32 1.5532247404885047E-4 0.0 0.0 5.173066772354981 0.0 33 1.5532247404885047E-4 0.0 0.0 5.326836021663343 0.0 34 1.812095530569922E-4 0.0 0.0 5.484643655296975 0.0 35 1.812095530569922E-4 0.0 0.0 5.655110070565589 0.0 36 1.812095530569922E-4 0.0 0.0 5.817784475052751 0.0 37 1.812095530569922E-4 0.0 0.0 5.989830002140861 0.0 38 1.812095530569922E-4 0.0 0.0 6.179944710376654 0.0 39 1.812095530569922E-4 0.0 0.0 6.4031172185058445 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 43075 0.0 43.798607 1 CGGTCTA 660 0.0 41.590908 31 CGACGGT 655 0.0 41.221375 28 CGGTCGA 40 3.4610457E-7 39.375004 18 GCCGATA 145 0.0 38.793106 9 CGTTAGT 35 6.252123E-6 38.571426 15 TACGGGA 1385 0.0 38.501804 4 AACGGGC 475 0.0 38.36842 4 TAGGGAC 3405 0.0 38.061676 5 TAGGGAT 5070 0.0 37.943787 5 GTTTTTT 50730 0.0 37.93022 2 ATAGGGA 4440 0.0 37.550674 4 CGTAAGG 480 0.0 37.500004 2 TTAGGGA 4385 0.0 37.40593 4 AGGGCGA 2035 0.0 37.37101 6 TAGGGTA 2495 0.0 37.33467 5 TACGGGC 490 0.0 37.19388 4 TAAGGGA 4435 0.0 37.136417 4 GCGTAAG 310 0.0 37.01613 1 AGGGATC 3185 0.0 36.87598 6 >>END_MODULE