SRR1547324_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547324_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1886399
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	16568	0.8782871492192267	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	2110	0.11185332477381509	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGCTTA	30	2.1662454E-6	45.000004	40
ACGATAA	25	3.8917606E-5	45.0	10
CCGTAGA	20	7.034439E-4	45.0	19
TCGAGTA	45	3.8562575E-10	45.0	27
CGCGTAT	20	7.034439E-4	45.0	26
CGACTAG	20	7.034439E-4	45.0	26
TAGTACG	55	1.8189894E-12	45.0	1
ACGCGTA	20	7.034439E-4	45.0	25
TATAGCG	130	0.0	44.999996	1
TACGCGG	165	0.0	43.636364	2
ATATGCG	100	0.0	42.75	1
CGTTTTT	7440	0.0	42.308468	1
CGGTCTA	410	0.0	41.707317	31
GGCGATA	560	0.0	41.383926	8
TAACGCC	240	0.0	41.250004	12
ATAACGC	240	0.0	41.250004	11
TCTCACG	445	0.0	40.955055	23
CGGGTTA	110	0.0	40.909092	6
CGAGTAC	50	1.0822987E-9	40.5	28
ATATCGG	50	1.0822987E-9	40.5	2